BLASTX nr result

ID: Coptis24_contig00001187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001187
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603759.1| Gibberellin-regulated protein [Medicago trun...   135   9e-30
ref|XP_003527650.1| PREDICTED: snakin-2-like [Glycine max]            131   1e-28
ref|NP_001237019.1| uncharacterized protein LOC100500115 precurs...   131   1e-28
ref|NP_001237144.1| uncharacterized protein LOC100305819 precurs...   130   2e-28
emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar]                 130   3e-28

>ref|XP_003603759.1| Gibberellin-regulated protein [Medicago truncatula]
           gi|355492807|gb|AES74010.1| Gibberellin-regulated
           protein [Medicago truncatula]
          Length = 103

 Score =  135 bits (339), Expect = 9e-30
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = +2

Query: 182 SLLQTIDCKAACTARCRLSSRPNLCHRACGTCCFRCSCVPPGTSGNQEVCPCYANMTTHG 361
           SL Q IDC  AC ARCRLSSRP+LCHRACGTCC RC+CVPPGTSGNQE+CPCYAN TTHG
Sbjct: 38  SLQQQIDCNGACAARCRLSSRPHLCHRACGTCCSRCNCVPPGTSGNQEMCPCYANQTTHG 97

Query: 362 GRRKCP 379
           GRRKCP
Sbjct: 98  GRRKCP 103


>ref|XP_003527650.1| PREDICTED: snakin-2-like [Glycine max]
          Length = 100

 Score =  131 bits (330), Expect = 1e-28
 Identities = 54/66 (81%), Positives = 60/66 (90%)
 Frame = +2

Query: 182 SLLQTIDCKAACTARCRLSSRPNLCHRACGTCCFRCSCVPPGTSGNQEVCPCYANMTTHG 361
           SL+Q IDC AAC ARCRL+SR  +CHRACGTCC RC+CVPPGTSGNQEVCPCYA++TTHG
Sbjct: 35  SLVQHIDCNAACAARCRLASRQRMCHRACGTCCRRCNCVPPGTSGNQEVCPCYASLTTHG 94

Query: 362 GRRKCP 379
           GRRKCP
Sbjct: 95  GRRKCP 100


>ref|NP_001237019.1| uncharacterized protein LOC100500115 precursor [Glycine max]
           gi|255629313|gb|ACU15001.1| unknown [Glycine max]
          Length = 99

 Score =  131 bits (329), Expect = 1e-28
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = +2

Query: 182 SLLQTIDCKAACTARCRLSSRPNLCHRACGTCCFRCSCVPPGTSGNQEVCPCYANMTTHG 361
           SLLQ IDC  AC ARCRLSSRP LC RACGTCC RC+CVPPGT+GNQEVCPCYA++TTHG
Sbjct: 34  SLLQQIDCNGACAARCRLSSRPRLCQRACGTCCRRCNCVPPGTAGNQEVCPCYASLTTHG 93

Query: 362 GRRKCP 379
           G+RKCP
Sbjct: 94  GKRKCP 99


>ref|NP_001237144.1| uncharacterized protein LOC100305819 precursor [Glycine max]
           gi|255626695|gb|ACU13692.1| unknown [Glycine max]
          Length = 99

 Score =  130 bits (328), Expect = 2e-28
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = +2

Query: 182 SLLQTIDCKAACTARCRLSSRPNLCHRACGTCCFRCSCVPPGTSGNQEVCPCYANMTTHG 361
           SLLQ IDC  AC ARCRLSSRP LC RACGTCC RC+CVPPGT+GNQEVCPCYA++TTHG
Sbjct: 34  SLLQKIDCNGACAARCRLSSRPRLCKRACGTCCRRCNCVPPGTAGNQEVCPCYASLTTHG 93

Query: 362 GRRKCP 379
           G+RKCP
Sbjct: 94  GKRKCP 99


>emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar]
          Length = 101

 Score =  130 bits (326), Expect = 3e-28
 Identities = 54/61 (88%), Positives = 56/61 (91%)
 Frame = +2

Query: 197 IDCKAACTARCRLSSRPNLCHRACGTCCFRCSCVPPGTSGNQEVCPCYANMTTHGGRRKC 376
           I+C AAC ARCRLSSRPNLCHRACGTCC RC CVPPGTSGNQ+VCPCY NMTTHGGRRKC
Sbjct: 41  INCGAACKARCRLSSRPNLCHRACGTCCARCRCVPPGTSGNQKVCPCYYNMTTHGGRRKC 100

Query: 377 P 379
           P
Sbjct: 101 P 101


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