BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001182
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   169   3e-40
ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   167   1e-39
ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   162   5e-38
emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]   161   9e-38

>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  169 bits (429), Expect = 3e-40
 Identities = 84/149 (56%), Positives = 105/149 (70%), Gaps = 9/149 (6%)
 Frame = -2

Query: 564 MNNTINAGGVL-SERINGVGYFFGVTVGIIGLIATMALASFFCNRVLTRPSPPQQSSRDA 388
           MNNT + GG L S  I G GY  GV++GI+ LI T+ LAS+FC R   +     Q+ R  
Sbjct: 1   MNNTSSGGGFLGSNDIGGFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQTRRRN 60

Query: 387 QSN-------LSIAVEIGLDETTLQSYPTLLYSEAKFKNKETTS-CCSICLSDYKDTDVL 232
           +S          I VE+G+DE TL++YP LLYS+AK  N +TT+ CCSICL+DYK TD+L
Sbjct: 61  RSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSICLADYKSTDML 120

Query: 231 RVLPDCGHVFHGRCVDPWLRLHPTCPVCR 145
           R+LPDCGH+FH +CVDPWLRLHPTCPVCR
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCR 149


>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  169 bits (429), Expect = 3e-40
 Identities = 85/132 (64%), Positives = 99/132 (75%), Gaps = 3/132 (2%)
 Frame = -2

Query: 531 SERINGVGYFFGVTVGIIGLIATMALASFFCNRVLTRPSPPQ-QSSRDAQSNL-SIAVEI 358
           S  I G GY  GV++GI+ LI T+ LAS+FC R      P Q ++S D Q NL S  VEI
Sbjct: 4   SNNIGGFGYGIGVSIGILLLITTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEI 63

Query: 357 GLDETTLQSYPTLLYSEAKF-KNKETTSCCSICLSDYKDTDVLRVLPDCGHVFHGRCVDP 181
           GLDE TL+SYPTLLYSEAK  K   T++CCSICL+DYK TD LR+LPDCGH+FH +CVDP
Sbjct: 64  GLDEATLKSYPTLLYSEAKLHKTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDP 123

Query: 180 WLRLHPTCPVCR 145
           WLRLHPTCPVCR
Sbjct: 124 WLRLHPTCPVCR 135


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  167 bits (424), Expect = 1e-39
 Identities = 83/147 (56%), Positives = 105/147 (71%), Gaps = 8/147 (5%)
 Frame = -2

Query: 561 NNTINAGGVLSE-RINGVGYFFGVTVGIIGLIATMALASFFCNR-----VLTRPSPPQQS 400
           N T   GG LS   I G GY  GV++G++ LI T+ LAS++C R      + + +PP +S
Sbjct: 3   NGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPNRS 62

Query: 399 SRDAQSNL-SIAVEIGLDETTLQSYPTLLYSEAKF-KNKETTSCCSICLSDYKDTDVLRV 226
              A   + S+ V+IGLD+ T+ SYP LLYSEAK  KN  T SCCSICL+DYK++DVLR+
Sbjct: 63  PPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRL 122

Query: 225 LPDCGHVFHGRCVDPWLRLHPTCPVCR 145
           LPDCGH+FH +CVDPWLRLHPTCPVCR
Sbjct: 123 LPDCGHLFHLKCVDPWLRLHPTCPVCR 149


>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  162 bits (410), Expect = 5e-38
 Identities = 78/146 (53%), Positives = 104/146 (71%), Gaps = 6/146 (4%)
 Frame = -2

Query: 564 MNNTINAGGVL-SERINGVGYFFGVTVGIIGLIATMALASFFCNRVLTRPSPPQQSSRDA 388
           MN T ++GG L S  I G+GY  GV+VGI+ LI T+ LAS+FC R    P+         
Sbjct: 1   MNGTADSGGFLGSNNIGGLGYGIGVSVGILLLITTITLASYFCTRPQQVPAAAYGGGGGL 60

Query: 387 QSNLSIA----VEIGLDETTLQSYPTLLYSEAKFKNKETTS-CCSICLSDYKDTDVLRVL 223
           +    +     V++GLDE T+ SYP ++YSEAK ++K++T+ CCSICL+DYK +D+LR+L
Sbjct: 61  REQQPVVEEFVVDVGLDEATILSYPKMVYSEAKLQHKDSTAACCSICLADYKGSDMLRLL 120

Query: 222 PDCGHVFHGRCVDPWLRLHPTCPVCR 145
           PDCGH+FH +CVDPWLRLHPTCPVCR
Sbjct: 121 PDCGHLFHLKCVDPWLRLHPTCPVCR 146


>emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]
          Length = 275

 Score =  161 bits (408), Expect = 9e-38
 Identities = 81/152 (53%), Positives = 106/152 (69%), Gaps = 12/152 (7%)
 Frame = -2

Query: 564 MNNTINAGGVL-SERINGVGYFFGVTVGIIGLIATMALASFFCNRVLTRPSPPQQSSRDA 388
           MN T ++GG+L S  I G+GY  GV+VGI+ LI T+ LAS+FC R       PQQ    A
Sbjct: 1   MNGTADSGGLLGSNNIGGLGYGIGVSVGILLLITTITLASYFCTR-------PQQVPAAA 53

Query: 387 QSNLSI----------AVEIGLDETTLQSYPTLLYSEAKFKNKETTS-CCSICLSDYKDT 241
                +           V++GLDE T+ SYP ++YSEAK ++K++T+ CCSICL+DYK +
Sbjct: 54  YGGGGLRLQQPVVEEFVVDVGLDEATILSYPKMVYSEAKLQHKDSTAACCSICLADYKGS 113

Query: 240 DVLRVLPDCGHVFHGRCVDPWLRLHPTCPVCR 145
           D+LR+LPDCGH+FH +CVDPWLRLHPTCPVCR
Sbjct: 114 DMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCR 145