BLASTX nr result

ID: Coptis24_contig00001137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001137
         (1531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    88   7e-15
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    85   4e-14
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    84   1e-13
ref|XP_002337484.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-12
ref|XP_002332528.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-12

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
            gi|223533283|gb|EEF35036.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 437

 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
 Frame = +3

Query: 984  CSWTPPLGDRIKVNTDAALSSNGLGHGGVMRDEIGRVLAGFTGSGGLHSVIFQELKAIEV 1163
            C W  P    IK+NTD ++     G GG++RD  G  +  F     L  +   EL AI  
Sbjct: 272  CIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWR 331

Query: 1164 SVSRCIEEGYKEVEVESDSMRAINAINKREKPPWYCRDVLAAIELKKQEFNFISFSHVFR 1343
             +   +  G K + VESDSM A+  IN+ +         L  I    ++F     SH +R
Sbjct: 332  GLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWR 391

Query: 1344 EVNRAADYLAGLDQSSN---FHTLHFVPPIDRVLQTIVNEDVRGKIYVRR 1484
            E N+AADYL+ +    N      +HF       LQ I+ +D +G+IY RR
Sbjct: 392  ETNKAADYLSKMVLERNDVVLWPVHF----PTTLQNIIKDDAQGRIYCRR 437


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 53/167 (31%), Positives = 78/167 (46%)
 Frame = +3

Query: 984  CSWTPPLGDRIKVNTDAALSSNGLGHGGVMRDEIGRVLAGFTGSGGLHSVIFQELKAIEV 1163
            C W  P    IK+NTD ++ S   G GG+ RD  G  + GF      H +   EL AI  
Sbjct: 165  CQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWR 224

Query: 1164 SVSRCIEEGYKEVEVESDSMRAINAINKREKPPWYCRDVLAAIELKKQEFNFISFSHVFR 1343
             +   +    + + VESDS+  +N IN+++         L  I L  ++F     SH +R
Sbjct: 225  GLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWR 284

Query: 1344 EVNRAADYLAGLDQSSNFHTLHFVPPIDRVLQTIVNEDVRGKIYVRR 1484
            E NRAADYLA +    +   + +       L  I+ +D  G +Y RR
Sbjct: 285  ETNRAADYLAKMVVERD--VVLWPADFPTSLNNIIKDDAEGMVYCRR 329


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
 Frame = +3

Query: 984  CSWTPPLGDRIKVNTDAALSSNGLGHGGVMRDEIGRVLAGFTGSGGLHSVIFQELKAIEV 1163
            C WT P     K+NTD ++ SN +  GG++RD  G  +  F        V   EL AI  
Sbjct: 306  CEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWR 365

Query: 1164 SVSRCIEEGYKEVEVESDSMRAINAINKREKPPWYCRDVLAAIELKKQEFNFISFSHVFR 1343
             +   +  G K + VESDSM  +  +N+++  P      L  I    ++F+    SH +R
Sbjct: 366  GLVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLKKFDKYQISHSWR 424

Query: 1344 EVNRAADYLAGLDQSSN---FHTLHFVPPIDRVLQTIVNEDVRGKIYVRR 1484
            E NRAAD+LA +D  +N      + F P + R    I+ +D +G  Y RR
Sbjct: 425  ETNRAADHLAKMDLLANDVVLSPVDFPPSLSR----IIEDDAKGTKYRRR 470


>ref|XP_002337484.1| predicted protein [Populus trichocarpa] gi|222839453|gb|EEE77790.1|
            predicted protein [Populus trichocarpa]
          Length = 228

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
 Frame = +3

Query: 990  WTPPLGDRIKVNTD-AALSSNG-LGHGGVMRDEIGRVLAGFTGSGGLHSVIFQEL----K 1151
            W+PP+ + +K N D ++L   G  G GGV+R+  G +L  F+   G+      EL    K
Sbjct: 82   WSPPMINSLKWNVDGSSLGKPGPSGIGGVLRNHHGHLLGIFSVPVGILDSNIAELRAIVK 141

Query: 1152 AIEVSVSRCIEEGYKEVEVESDSMRAINAINKREKPPWYCRDVLAAIELKKQEFNFISFS 1331
            AIE+S S C+   ++ + +ESDS+ AI+ +NK    PW   ++ +++   K  F  I+FS
Sbjct: 142  AIELSASNCLFH-HQHLIIESDSVNAISWMNKPHNRPWKHHNLFSSVNRLKAYFGSITFS 200

Query: 1332 HVFREVNRAADYLA--GLDQSSNF 1397
            H+FRE N  AD +A  G+ +SS+F
Sbjct: 201  HIFRESNCMADCMAKQGVQRSSDF 224


>ref|XP_002332528.1| predicted protein [Populus trichocarpa] gi|222832640|gb|EEE71117.1|
            predicted protein [Populus trichocarpa]
          Length = 148

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
 Frame = +3

Query: 990  WTPPLGDRIKVNTD-AALSSNG-LGHGGVMRDEIGRVLAGFTGSGGLHSVIFQEL----K 1151
            W+PP+ + +K N D ++L   G  G GGV+R+  G +L  F+   G+      EL    K
Sbjct: 2    WSPPMINSLKWNVDGSSLGKPGPSGIGGVLRNHHGHLLGMFSVPVGILDSNIAELRAIVK 61

Query: 1152 AIEVSVSRCIEEGYKEVEVESDSMRAINAINKREKPPWYCRDVLAAIELKKQEFNFISFS 1331
            AIE+  S C+   ++ + +ESDS+ AI+ +NK    PW   ++ +++   K  F  I+FS
Sbjct: 62   AIELLASNCLFH-HQHLIIESDSVNAISWMNKPHNRPWKHHNLFSSVNRLKAYFGSITFS 120

Query: 1332 HVFREVNRAADYLA--GLDQSSNF 1397
            H+FRE N  AD +A  G+ +SS+F
Sbjct: 121  HIFRESNCMADCMAKQGVQRSSDF 144


Top