BLASTX nr result

ID: Coptis24_contig00001126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001126
         (1598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]   413   e-113
ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein...   413   e-113
ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein...   413   e-113
ref|XP_002520669.1| protein binding protein, putative [Ricinus c...   407   e-111
ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109

>emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
          Length = 1388

 Score =  413 bits (1062), Expect = e-113
 Identities = 224/318 (70%), Positives = 242/318 (76%)
 Frame = +1

Query: 622  TVLNLDFFQRVVSALKSKGLKQDLISRILINYAQNSLQGLLVRDPQLVKENILDVESQKK 801
            TVLNLDFFQRV+SA+KSKGLKQDLIS+ILINYA NSLQGL VRDPQLVK + LD+E QKK
Sbjct: 892  TVLNLDFFQRVLSAVKSKGLKQDLISKILINYAHNSLQGLAVRDPQLVKGSFLDLELQKK 951

Query: 802  QRVTVEVIVSLLPTQSRKSTVPMAFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILE 981
            QRV VE IVSLLPTQSRKS+VPMAFLSSLLKTAIS+SAS  CRSDLERR+GLQLDQAILE
Sbjct: 952  QRVIVEAIVSLLPTQSRKSSVPMAFLSSLLKTAISASASTACRSDLERRIGLQLDQAILE 1011

Query: 982  DILIPTNSQSKNHQPLYETDTIVKTFSIFXXXXXXXXXXXXXXXXXXXSYDFDSPGSPKQ 1161
            DILIP NS   NH P+Y+TD+I++ FSIF                    YDFDSPGSPKQ
Sbjct: 1012 DILIPANSHGNNHGPIYDTDSILRIFSIFLNLDEDDDEDNHLRDESEMVYDFDSPGSPKQ 1071

Query: 1162 SSILKVSKLLDNYLAEIALDSNLIPSKFIALAELLPDHARIISDGLYRAVDIFLKVKSNF 1341
            SSI+KVSKLLDNYLAE+ALDSNL PSKFIAL+ELLPDHARI++DGLYRA DIFLK     
Sbjct: 1072 SSIJKVSKLLDNYLAEVALDSNLTPSKFIALSELLPDHARIVNDGLYRAADIFLK----- 1126

Query: 1342 QGKQ*FWL*XXXXXXXXXXXXXXXXXXXXXXM*VHPNIKDSERYRLCKTIDCQKLSQEAC 1521
                                             VHPNIKDSERYRLCKTID QKLSQEAC
Sbjct: 1127 ---------------------------------VHPNIKDSERYRLCKTIDSQKLSQEAC 1153

Query: 1522 SHAAQNERLPVQMAVQVL 1575
            SHAAQNERLPVQMAVQVL
Sbjct: 1154 SHAAQNERLPVQMAVQVL 1171



 Score =  172 bits (436), Expect = 2e-40
 Identities = 85/113 (75%), Positives = 99/113 (87%)
 Frame = +2

Query: 227  NYPLLQFPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLP 406
            ++ L +FPLVSRSGRIRKL+ E KDSKV RI +P+VPGGPEAFELAAKFCYG+NIEITL 
Sbjct: 722  SFALHKFPLVSRSGRIRKLLLEAKDSKVSRIAIPSVPGGPEAFELAAKFCYGVNIEITLS 781

Query: 407  NVAMLRCAAHYLQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 565
            NVAMLRC AH+L++TEEFAEKNLE RTE YLKE V  NIS+SI+VLH C++LL
Sbjct: 782  NVAMLRCVAHFLEMTEEFAEKNLETRTEGYLKETVFPNISSSISVLHQCETLL 834


>ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform 2
            [Vitis vinifera]
          Length = 655

 Score =  413 bits (1061), Expect = e-113
 Identities = 224/318 (70%), Positives = 242/318 (76%)
 Frame = +1

Query: 622  TVLNLDFFQRVVSALKSKGLKQDLISRILINYAQNSLQGLLVRDPQLVKENILDVESQKK 801
            TVLNLDFFQRV+SA+KSKGLKQDLIS+ILINYA NSLQGL VRDPQLVK + LD+E QKK
Sbjct: 242  TVLNLDFFQRVLSAVKSKGLKQDLISKILINYAHNSLQGLAVRDPQLVKGSFLDLELQKK 301

Query: 802  QRVTVEVIVSLLPTQSRKSTVPMAFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILE 981
            QRV VE IVSLLPTQSRKS+VPMAFLSSLLKTAIS+SAS  CRSDLERR+GLQLDQAILE
Sbjct: 302  QRVIVEAIVSLLPTQSRKSSVPMAFLSSLLKTAISASASTACRSDLERRIGLQLDQAILE 361

Query: 982  DILIPTNSQSKNHQPLYETDTIVKTFSIFXXXXXXXXXXXXXXXXXXXSYDFDSPGSPKQ 1161
            DILIP NS   NH P+Y+TD+I++ FSIF                    YDFDSPGSPKQ
Sbjct: 362  DILIPANSHGNNHGPIYDTDSILRIFSIFLNLDEDDDEDNHLRDESEMVYDFDSPGSPKQ 421

Query: 1162 SSILKVSKLLDNYLAEIALDSNLIPSKFIALAELLPDHARIISDGLYRAVDIFLKVKSNF 1341
            SSI+KVSKLLDNYLAE+ALDSNL PSKFIAL+ELLPDHARI++DGLYRA DIFLK     
Sbjct: 422  SSIIKVSKLLDNYLAEVALDSNLTPSKFIALSELLPDHARIVNDGLYRAADIFLK----- 476

Query: 1342 QGKQ*FWL*XXXXXXXXXXXXXXXXXXXXXXM*VHPNIKDSERYRLCKTIDCQKLSQEAC 1521
                                             VHPNIKDSERYRLCKTID QKLSQEAC
Sbjct: 477  ---------------------------------VHPNIKDSERYRLCKTIDSQKLSQEAC 503

Query: 1522 SHAAQNERLPVQMAVQVL 1575
            SHAAQNERLPVQMAVQVL
Sbjct: 504  SHAAQNERLPVQMAVQVL 521



 Score =  179 bits (454), Expect = 2e-42
 Identities = 92/132 (69%), Positives = 109/132 (82%)
 Frame = +2

Query: 170 VQKGKRKRREEDATDA*FINYPLLQFPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPE 349
           V+K K+ R+  + T    + +PL QFPLVSRSGRIRKL+ E KDSKV RI +P+VPGGPE
Sbjct: 54  VRKQKKLRKNFNGTFNYVVGFPL-QFPLVSRSGRIRKLLLEAKDSKVSRIAIPSVPGGPE 112

Query: 350 AFELAAKFCYGINIEITLPNVAMLRCAAHYLQLTEEFAEKNLEIRTEIYLKEMVLQNISN 529
           AFELAAKFCYG+NIEITL NVAMLRC AH+L++TEEFAEKNLE RTE YLKE V  NIS+
Sbjct: 113 AFELAAKFCYGVNIEITLSNVAMLRCVAHFLEMTEEFAEKNLETRTEGYLKETVFPNISS 172

Query: 530 SIAVLHCCKSLL 565
           SI+VLH C++LL
Sbjct: 173 SISVLHQCETLL 184


>ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform 1
            [Vitis vinifera] gi|296086620|emb|CBI32255.3| unnamed
            protein product [Vitis vinifera]
          Length = 631

 Score =  413 bits (1061), Expect = e-113
 Identities = 224/318 (70%), Positives = 242/318 (76%)
 Frame = +1

Query: 622  TVLNLDFFQRVVSALKSKGLKQDLISRILINYAQNSLQGLLVRDPQLVKENILDVESQKK 801
            TVLNLDFFQRV+SA+KSKGLKQDLIS+ILINYA NSLQGL VRDPQLVK + LD+E QKK
Sbjct: 218  TVLNLDFFQRVLSAVKSKGLKQDLISKILINYAHNSLQGLAVRDPQLVKGSFLDLELQKK 277

Query: 802  QRVTVEVIVSLLPTQSRKSTVPMAFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILE 981
            QRV VE IVSLLPTQSRKS+VPMAFLSSLLKTAIS+SAS  CRSDLERR+GLQLDQAILE
Sbjct: 278  QRVIVEAIVSLLPTQSRKSSVPMAFLSSLLKTAISASASTACRSDLERRIGLQLDQAILE 337

Query: 982  DILIPTNSQSKNHQPLYETDTIVKTFSIFXXXXXXXXXXXXXXXXXXXSYDFDSPGSPKQ 1161
            DILIP NS   NH P+Y+TD+I++ FSIF                    YDFDSPGSPKQ
Sbjct: 338  DILIPANSHGNNHGPIYDTDSILRIFSIFLNLDEDDDEDNHLRDESEMVYDFDSPGSPKQ 397

Query: 1162 SSILKVSKLLDNYLAEIALDSNLIPSKFIALAELLPDHARIISDGLYRAVDIFLKVKSNF 1341
            SSI+KVSKLLDNYLAE+ALDSNL PSKFIAL+ELLPDHARI++DGLYRA DIFLK     
Sbjct: 398  SSIIKVSKLLDNYLAEVALDSNLTPSKFIALSELLPDHARIVNDGLYRAADIFLK----- 452

Query: 1342 QGKQ*FWL*XXXXXXXXXXXXXXXXXXXXXXM*VHPNIKDSERYRLCKTIDCQKLSQEAC 1521
                                             VHPNIKDSERYRLCKTID QKLSQEAC
Sbjct: 453  ---------------------------------VHPNIKDSERYRLCKTIDSQKLSQEAC 479

Query: 1522 SHAAQNERLPVQMAVQVL 1575
            SHAAQNERLPVQMAVQVL
Sbjct: 480  SHAAQNERLPVQMAVQVL 497



 Score =  172 bits (436), Expect = 2e-40
 Identities = 85/113 (75%), Positives = 99/113 (87%)
 Frame = +2

Query: 227 NYPLLQFPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLP 406
           ++ L +FPLVSRSGRIRKL+ E KDSKV RI +P+VPGGPEAFELAAKFCYG+NIEITL 
Sbjct: 48  SFALHKFPLVSRSGRIRKLLLEAKDSKVSRIAIPSVPGGPEAFELAAKFCYGVNIEITLS 107

Query: 407 NVAMLRCAAHYLQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 565
           NVAMLRC AH+L++TEEFAEKNLE RTE YLKE V  NIS+SI+VLH C++LL
Sbjct: 108 NVAMLRCVAHFLEMTEEFAEKNLETRTEGYLKETVFPNISSSISVLHQCETLL 160


>ref|XP_002520669.1| protein binding protein, putative [Ricinus communis]
            gi|223540054|gb|EEF41631.1| protein binding protein,
            putative [Ricinus communis]
          Length = 631

 Score =  407 bits (1046), Expect = e-111
 Identities = 218/317 (68%), Positives = 243/317 (76%)
 Frame = +1

Query: 625  VLNLDFFQRVVSALKSKGLKQDLISRILINYAQNSLQGLLVRDPQLVKENILDVESQKKQ 804
            VLNLDFFQRV+S +KSKGLKQD+IS+ILINYA NSLQGL+VRDP L+K ++LD+E QKKQ
Sbjct: 218  VLNLDFFQRVLSTVKSKGLKQDMISKILINYAHNSLQGLVVRDPHLLKGSLLDLELQKKQ 277

Query: 805  RVTVEVIVSLLPTQSRKSTVPMAFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILED 984
            RV VE IVSLLPTQSRKS VPMAFLSSLLKTAI++SA+ +CRSDLERR+GLQLDQAILED
Sbjct: 278  RVIVEAIVSLLPTQSRKSPVPMAFLSSLLKTAIAASATTSCRSDLERRIGLQLDQAILED 337

Query: 985  ILIPTNSQSKNHQPLYETDTIVKTFSIFXXXXXXXXXXXXXXXXXXXSYDFDSPGSPKQS 1164
            ILIP NS   +H  LY+TD+I++ FS+F                    YDFDSPGSPKQS
Sbjct: 338  ILIPANSHGNSHSTLYDTDSILRIFSMFLNLDEDDDEDNHLRDESEMIYDFDSPGSPKQS 397

Query: 1165 SILKVSKLLDNYLAEIALDSNLIPSKFIALAELLPDHARIISDGLYRAVDIFLKVKSNFQ 1344
            SILKVSKLLDNYLAE+ALDSNL+PSKFI+LAELLPDHAR++SDGLYRAVDIFLK      
Sbjct: 398  SILKVSKLLDNYLAEVALDSNLMPSKFISLAELLPDHARLVSDGLYRAVDIFLK------ 451

Query: 1345 GKQ*FWL*XXXXXXXXXXXXXXXXXXXXXXM*VHPNIKDSERYRLCKTIDCQKLSQEACS 1524
                                            VHPNIKDSERYRLCKTIDCQKLSQEACS
Sbjct: 452  --------------------------------VHPNIKDSERYRLCKTIDCQKLSQEACS 479

Query: 1525 HAAQNERLPVQMAVQVL 1575
            HAAQNERLPVQMAVQVL
Sbjct: 480  HAAQNERLPVQMAVQVL 496



 Score =  166 bits (421), Expect = 1e-38
 Identities = 81/113 (71%), Positives = 98/113 (86%)
 Frame = +2

Query: 227 NYPLLQFPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLP 406
           ++ L +FPLVSRSGRIRKL+ E KDSKV RI++  VPGG EAFELAAKFCYG+N+EITL 
Sbjct: 48  SFALHKFPLVSRSGRIRKLLLEAKDSKVSRISIACVPGGAEAFELAAKFCYGVNVEITLS 107

Query: 407 NVAMLRCAAHYLQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 565
           NVAM+ CAAH+L++TE+FAEKNLE R E YLKEMVL NIS+SI+VLH C++LL
Sbjct: 108 NVAMILCAAHFLEMTEDFAEKNLEARAEAYLKEMVLPNISSSISVLHRCETLL 160


>ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|222861131|gb|EEE98673.1|
            predicted protein [Populus trichocarpa]
          Length = 632

 Score =  402 bits (1034), Expect = e-109
 Identities = 220/318 (69%), Positives = 242/318 (76%), Gaps = 1/318 (0%)
 Frame = +1

Query: 625  VLNLDFFQRVVSALKSKGLKQDLISRILINYAQNSLQGLLVRDPQLVKENILDVESQKKQ 804
            VL+LDFFQRV+SA+KSKGLKQD+IS+ILINYA NSLQGL+ RDPQLVK ++LD+E QKKQ
Sbjct: 219  VLSLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGLVGRDPQLVKGSLLDLELQKKQ 278

Query: 805  RVTVEVIVSLLPTQSRKSTVPMAFLSSLLKTAISSSASATCRSDLERRMGLQLDQAILED 984
            RV VE IVSLLPTQSRK  VPMAFLSSLLKTAI+SSA+ +CRSDLERR+GLQLDQAILED
Sbjct: 279  RVIVEAIVSLLPTQSRKCPVPMAFLSSLLKTAIASSATTSCRSDLERRIGLQLDQAILED 338

Query: 985  ILIPTNSQSKNHQPLYETDTIVKTFSIFXXXXXXXXXXXXXXXXXXXS-YDFDSPGSPKQ 1161
            ILIP NS   NH  +Y+TD+I++ FSIF                     YDFDSPGSPKQ
Sbjct: 339  ILIPANSHGNNHCTMYDTDSILRIFSIFLNLDDEDDDEDNNLRDESEMVYDFDSPGSPKQ 398

Query: 1162 SSILKVSKLLDNYLAEIALDSNLIPSKFIALAELLPDHARIISDGLYRAVDIFLKVKSNF 1341
            SSILKVSKLLDN+LAE+ALDSNL+PSKFIALAELLPDHARI+ DGLYRAVDIFLK     
Sbjct: 399  SSILKVSKLLDNFLAEVALDSNLLPSKFIALAELLPDHARIVGDGLYRAVDIFLK----- 453

Query: 1342 QGKQ*FWL*XXXXXXXXXXXXXXXXXXXXXXM*VHPNIKDSERYRLCKTIDCQKLSQEAC 1521
                                             VHPNIKDSERYRLCKTIDCQKLSQEAC
Sbjct: 454  ---------------------------------VHPNIKDSERYRLCKTIDCQKLSQEAC 480

Query: 1522 SHAAQNERLPVQMAVQVL 1575
            SHAAQNERLPVQMAVQVL
Sbjct: 481  SHAAQNERLPVQMAVQVL 498



 Score =  175 bits (443), Expect = 3e-41
 Identities = 84/113 (74%), Positives = 100/113 (88%)
 Frame = +2

Query: 227 NYPLLQFPLVSRSGRIRKLVSETKDSKVPRINLPAVPGGPEAFELAAKFCYGINIEITLP 406
           N+ L +FPLVSRSGRIRKL+ E KDSK+ RIN+PAVPGGPEAFELAAKFCYG+N+EIT  
Sbjct: 48  NFALHKFPLVSRSGRIRKLLLEAKDSKISRINIPAVPGGPEAFELAAKFCYGVNVEITQS 107

Query: 407 NVAMLRCAAHYLQLTEEFAEKNLEIRTEIYLKEMVLQNISNSIAVLHCCKSLL 565
           NVAML CAAH+L++TE+FAEKNLE R E YLKEMVL NIS+SI+V+H C++LL
Sbjct: 108 NVAMLCCAAHFLEMTEDFAEKNLEARAEAYLKEMVLPNISSSISVIHRCETLL 160


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