BLASTX nr result

ID: Coptis24_contig00001125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001125
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein...   197   9e-49
ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein...   197   9e-49
ref|XP_002320640.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-48
ref|XP_002520669.1| protein binding protein, putative [Ricinus c...   196   2e-48

>ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|222861131|gb|EEE98673.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  199 bits (507), Expect = 2e-49
 Identities = 103/141 (73%), Positives = 112/141 (79%)
 Frame = -1

Query: 540 QMAVQVLYFEQIRLRNAMNGGHNQLFFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRREN 361
           QMAVQVLYFEQIRLRNAMNGGHNQLFFG++N QFPQR          SPRDNYASVRREN
Sbjct: 492 QMAVQVLYFEQIRLRNAMNGGHNQLFFGALNGQFPQRSGSGAGSGAISPRDNYASVRREN 551

Query: 360 RELKLEVARMRMRLTDLEKDHVSMKQDLVRSNPANXXXXXXXXXXXXLNDLFRINNVRPI 181
           RELKLEVARMRMRLTDLEKDHVSMKQ+LVR++PAN            LN LFRIN ++P+
Sbjct: 552 RELKLEVARMRMRLTDLEKDHVSMKQELVRTHPANKLFKSFTKKLSKLNTLFRINGLKPL 611

Query: 180 GANPNSEHRFLFQKRRRHSLS 118
           G   NSE RFLFQKRRRHS+S
Sbjct: 612 GGKANSETRFLFQKRRRHSVS 632


>ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform
           2 [Vitis vinifera]
          Length = 655

 Score =  197 bits (501), Expect = 9e-49
 Identities = 103/141 (73%), Positives = 110/141 (78%)
 Frame = -1

Query: 540 QMAVQVLYFEQIRLRNAMNGGHNQLFFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRREN 361
           QMAVQVLYFEQIRLRNAMNGGHNQ FFGS+N QFPQR          SPRDNYASVRREN
Sbjct: 515 QMAVQVLYFEQIRLRNAMNGGHNQFFFGSVNGQFPQRSSSGAGSGAISPRDNYASVRREN 574

Query: 360 RELKLEVARMRMRLTDLEKDHVSMKQDLVRSNPANXXXXXXXXXXXXLNDLFRINNVRPI 181
           RELKLEVARMRMRLTDLEKDHVSMKQ+LVRS+PAN            LN LFRI +++PI
Sbjct: 575 RELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANKIFKSFTKKLCKLNTLFRIRDIKPI 634

Query: 180 GANPNSEHRFLFQKRRRHSLS 118
           G   NSE RFLF KRRRHS+S
Sbjct: 635 GGKANSETRFLFPKRRRHSVS 655


>ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform
           1 [Vitis vinifera] gi|296086620|emb|CBI32255.3| unnamed
           protein product [Vitis vinifera]
          Length = 631

 Score =  197 bits (501), Expect = 9e-49
 Identities = 103/141 (73%), Positives = 110/141 (78%)
 Frame = -1

Query: 540 QMAVQVLYFEQIRLRNAMNGGHNQLFFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRREN 361
           QMAVQVLYFEQIRLRNAMNGGHNQ FFGS+N QFPQR          SPRDNYASVRREN
Sbjct: 491 QMAVQVLYFEQIRLRNAMNGGHNQFFFGSVNGQFPQRSSSGAGSGAISPRDNYASVRREN 550

Query: 360 RELKLEVARMRMRLTDLEKDHVSMKQDLVRSNPANXXXXXXXXXXXXLNDLFRINNVRPI 181
           RELKLEVARMRMRLTDLEKDHVSMKQ+LVRS+PAN            LN LFRI +++PI
Sbjct: 551 RELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANKIFKSFTKKLCKLNTLFRIRDIKPI 610

Query: 180 GANPNSEHRFLFQKRRRHSLS 118
           G   NSE RFLF KRRRHS+S
Sbjct: 611 GGKANSETRFLFPKRRRHSVS 631


>ref|XP_002320640.1| predicted protein [Populus trichocarpa] gi|222861413|gb|EEE98955.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  196 bits (499), Expect = 1e-48
 Identities = 102/141 (72%), Positives = 110/141 (78%)
 Frame = -1

Query: 540 QMAVQVLYFEQIRLRNAMNGGHNQLFFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRREN 361
           QMAVQVLYFEQIRLRNAMNGGHNQ FFG++N QFPQR          SPRDNYASVRREN
Sbjct: 491 QMAVQVLYFEQIRLRNAMNGGHNQFFFGALNGQFPQRSGSGAGSGAISPRDNYASVRREN 550

Query: 360 RELKLEVARMRMRLTDLEKDHVSMKQDLVRSNPANXXXXXXXXXXXXLNDLFRINNVRPI 181
           RELKLEVARMRMR+TDLEKDHVSMKQ+LVRS+PAN            LN LFRIN ++PI
Sbjct: 551 RELKLEVARMRMRMTDLEKDHVSMKQELVRSHPANKFFKSFTKKLSKLNALFRINGLKPI 610

Query: 180 GANPNSEHRFLFQKRRRHSLS 118
           G   NSE R LFQKRRRHS+S
Sbjct: 611 GGKANSETRLLFQKRRRHSVS 631


>ref|XP_002520669.1| protein binding protein, putative [Ricinus communis]
           gi|223540054|gb|EEF41631.1| protein binding protein,
           putative [Ricinus communis]
          Length = 631

 Score =  196 bits (498), Expect = 2e-48
 Identities = 104/142 (73%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
 Frame = -1

Query: 540 QMAVQVLYFEQIRLRNAMNGGHNQLFFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRREN 361
           QMAVQVLYFEQIRLRNAMNGGHNQ FFG+MN QFPQR          SPRDNYASVRREN
Sbjct: 490 QMAVQVLYFEQIRLRNAMNGGHNQFFFGAMNGQFPQRSGSGAGSGAISPRDNYASVRREN 549

Query: 360 RELKLEVARMRMRLTDLEKDHVSMKQDLVRSNPANXXXXXXXXXXXXLNDLFRINNVRPI 181
           RELKLEVARMRMRLTDLEKDHVSMKQ+LVR++PAN            LN LFRIN ++PI
Sbjct: 550 RELKLEVARMRMRLTDLEKDHVSMKQELVRTHPANKLFKSFTRKLSKLNSLFRINGLKPI 609

Query: 180 -GANPNSEHRFLFQKRRRHSLS 118
            G   NSE RFLFQKRRRHS+S
Sbjct: 610 GGGKANSESRFLFQKRRRHSVS 631


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