BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001121
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874908.1| hypothetical protein ARALYDRAFT_490304 [Arab...   451   e-124
ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   451   e-124
ref|NP_567244.1| NADH dehydrogenase (ubiquinone) flavoprotein 2 ...   446   e-123
ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit...   442   e-122
ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120

>ref|XP_002874908.1| hypothetical protein ARALYDRAFT_490304 [Arabidopsis lyrata subsp.
           lyrata] gi|297320745|gb|EFH51167.1| hypothetical protein
           ARALYDRAFT_490304 [Arabidopsis lyrata subsp. lyrata]
          Length = 255

 Score =  451 bits (1161), Expect = e-124
 Identities = 220/255 (86%), Positives = 230/255 (90%)
 Frame = +2

Query: 44  MLARLATKRFLEIRQIFRQPPSQTCRSLSTAFNYHLDSPDNKPDTPWEFNHNNQVKVKEI 223
           MLARLA KR LEIRQ+FRQP SQ  RSLSTA NYHLDSPDNKPD PWEF+  NQ KVKEI
Sbjct: 1   MLARLAAKRLLEIRQVFRQPTSQVSRSLSTALNYHLDSPDNKPDLPWEFSEANQSKVKEI 60

Query: 224 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA 403
           LS+YPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA
Sbjct: 61  LSYYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA 120

Query: 404 KVGKYHLLVCGTSPCMIRGSRDIEDALLKHLGVKRNEVTKDGMFSVGEMECMGSCVNAPM 583
           KVGKYHLLVCGT+PCMIRGSRDIE ALL HLGVKR EVTKDG+FSVGEMECMG CVNAPM
Sbjct: 121 KVGKYHLLVCGTTPCMIRGSRDIESALLDHLGVKRGEVTKDGLFSVGEMECMGCCVNAPM 180

Query: 584 IAVADYSEGSEGYTYNYYEDLTPKQVVEIVELLRKGETPPVGTQNKMRINSGPEGGNTTL 763
           I VADYS GSEGYTYNY+ED+TP++VVEIVE LRKGE PP GTQN  RI  GPEGGNTTL
Sbjct: 181 ITVADYSNGSEGYTYNYFEDVTPEKVVEIVEKLRKGEKPPHGTQNPKRIKCGPEGGNTTL 240

Query: 764 LGDPKPPPCRDLDAC 808
           LG+PKPP  RDLDAC
Sbjct: 241 LGEPKPPQFRDLDAC 255


>ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2,
           mitochondrial [Vitis vinifera]
           gi|297735489|emb|CBI17929.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  451 bits (1160), Expect = e-124
 Identities = 219/255 (85%), Positives = 232/255 (90%)
 Frame = +2

Query: 44  MLARLATKRFLEIRQIFRQPPSQTCRSLSTAFNYHLDSPDNKPDTPWEFNHNNQVKVKEI 223
           MLARLATKR LE+RQIFRQ   QT RS STA NYHLDSPDN P+ PWEFN  N+ KVKEI
Sbjct: 1   MLARLATKRLLEVRQIFRQN-HQTSRSFSTALNYHLDSPDNNPNIPWEFNDANKGKVKEI 59

Query: 224 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA 403
           LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAKV+EVAPIRVYEVATFYSMFNRA
Sbjct: 60  LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVVEVAPIRVYEVATFYSMFNRA 119

Query: 404 KVGKYHLLVCGTSPCMIRGSRDIEDALLKHLGVKRNEVTKDGMFSVGEMECMGSCVNAPM 583
           KVGKYHLLVCGT+PCMIRGSR+IEDALLKHLGVKRNEVTKDG+FSVGEMECMG CVNAPM
Sbjct: 120 KVGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 179

Query: 584 IAVADYSEGSEGYTYNYYEDLTPKQVVEIVELLRKGETPPVGTQNKMRINSGPEGGNTTL 763
           I VADYS GSEGYTYNYYED+TPK+VVEIVE+LR+GE PP GTQN  R   GPEGGNTTL
Sbjct: 180 ITVADYSTGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKPPHGTQNPQRTRCGPEGGNTTL 239

Query: 764 LGDPKPPPCRDLDAC 808
           LG+PK PPCRDLDAC
Sbjct: 240 LGEPKAPPCRDLDAC 254


>ref|NP_567244.1| NADH dehydrogenase (ubiquinone) flavoprotein 2 [Arabidopsis
           thaliana] gi|55584146|sp|O22769.3|NDUV2_ARATH RecName:
           Full=NADH dehydrogenase [ubiquinone] flavoprotein 2,
           mitochondrial; Flags: Precursor
           gi|15450451|gb|AAK96519.1| AT4g02580/T10P11_14
           [Arabidopsis thaliana] gi|24797038|gb|AAN64531.1|
           At4g02580/T10P11_14 [Arabidopsis thaliana]
           gi|332656798|gb|AEE82198.1| NADH dehydrogenase
           (ubiquinone) flavoprotein 2 [Arabidopsis thaliana]
          Length = 255

 Score =  446 bits (1148), Expect = e-123
 Identities = 218/255 (85%), Positives = 229/255 (89%)
 Frame = +2

Query: 44  MLARLATKRFLEIRQIFRQPPSQTCRSLSTAFNYHLDSPDNKPDTPWEFNHNNQVKVKEI 223
           MLARLA KR LEIRQ+FRQP SQ  RSLSTA NYHLDSPDNKPD PWEF+  NQ KVKEI
Sbjct: 1   MLARLAAKRLLEIRQVFRQPTSQVTRSLSTALNYHLDSPDNKPDLPWEFSEANQSKVKEI 60

Query: 224 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA 403
           LS+YPSNYKQSAVIPLLDLAQQQ+GGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA
Sbjct: 61  LSYYPSNYKQSAVIPLLDLAQQQNGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA 120

Query: 404 KVGKYHLLVCGTSPCMIRGSRDIEDALLKHLGVKRNEVTKDGMFSVGEMECMGSCVNAPM 583
           KVGKYHLLVCGT+PCMIRGSRDIE ALL HLGVKR EVTKDG+FSVGEMECMG CVNAPM
Sbjct: 121 KVGKYHLLVCGTTPCMIRGSRDIESALLDHLGVKRGEVTKDGLFSVGEMECMGCCVNAPM 180

Query: 584 IAVADYSEGSEGYTYNYYEDLTPKQVVEIVELLRKGETPPVGTQNKMRINSGPEGGNTTL 763
           I VADYS GSEGYTYNY+ED+TP++VVEIVE LRKGE PP GTQN  RI  GPEGGN TL
Sbjct: 181 ITVADYSNGSEGYTYNYFEDVTPEKVVEIVEKLRKGEKPPHGTQNPKRIKCGPEGGNKTL 240

Query: 764 LGDPKPPPCRDLDAC 808
           LG+PKPP  RDLDAC
Sbjct: 241 LGEPKPPQFRDLDAC 255


>ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit, putative [Ricinus
           communis] gi|223539814|gb|EEF41394.1| NADH-ubiquinone
           oxidoreductase 24 kD subunit, putative [Ricinus
           communis]
          Length = 255

 Score =  442 bits (1138), Expect = e-122
 Identities = 211/255 (82%), Positives = 228/255 (89%)
 Frame = +2

Query: 44  MLARLATKRFLEIRQIFRQPPSQTCRSLSTAFNYHLDSPDNKPDTPWEFNHNNQVKVKEI 223
           MLARLA  R  EIRQ+F Q   Q  RS STA NYH+DSPDN P+ PWEF+  N+ KVKEI
Sbjct: 1   MLARLAATRLREIRQVFGQSSQQISRSFSTALNYHIDSPDNNPNIPWEFSEKNKEKVKEI 60

Query: 224 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA 403
           +SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAKVIEVAPIRVYEVATFYSMFNR+
Sbjct: 61  ISHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVIEVAPIRVYEVATFYSMFNRS 120

Query: 404 KVGKYHLLVCGTSPCMIRGSRDIEDALLKHLGVKRNEVTKDGMFSVGEMECMGSCVNAPM 583
            VGKYHLLVCGT+PCMIRGSR+IEDALLKHLGVKRNEVTKDG+FSVGEMECMG CVNAPM
Sbjct: 121 PVGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 180

Query: 584 IAVADYSEGSEGYTYNYYEDLTPKQVVEIVELLRKGETPPVGTQNKMRINSGPEGGNTTL 763
           I VADYS GSEGYTYNYYED+TPK+VVEIV++LR+GE PP GTQN  RI SGPEGGNTTL
Sbjct: 181 ITVADYSNGSEGYTYNYYEDVTPKRVVEIVDMLRRGEKPPHGTQNPKRIKSGPEGGNTTL 240

Query: 764 LGDPKPPPCRDLDAC 808
            G+PKPPPCRDLDAC
Sbjct: 241 NGEPKPPPCRDLDAC 255


>ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|222857073|gb|EEE94620.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  437 bits (1123), Expect = e-120
 Identities = 211/255 (82%), Positives = 227/255 (89%)
 Frame = +2

Query: 44  MLARLATKRFLEIRQIFRQPPSQTCRSLSTAFNYHLDSPDNKPDTPWEFNHNNQVKVKEI 223
           MLAR+   R LEIRQ  R  P Q  RSLSTA NYH+D+ DN PD PWEF+ +N+ KVKEI
Sbjct: 1   MLARIVATRLLEIRQSLRLTP-QASRSLSTALNYHIDTADNNPDLPWEFSASNKEKVKEI 59

Query: 224 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA 403
           +SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNR+
Sbjct: 60  VSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRS 119

Query: 404 KVGKYHLLVCGTSPCMIRGSRDIEDALLKHLGVKRNEVTKDGMFSVGEMECMGSCVNAPM 583
            VGKYHLLVCGT+PCMIRGSR+IEDALLKHLGVKRNEVTKDG+FSVGEMECMG CVNAPM
Sbjct: 120 PVGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 179

Query: 584 IAVADYSEGSEGYTYNYYEDLTPKQVVEIVELLRKGETPPVGTQNKMRINSGPEGGNTTL 763
           I VADYS GSEGYTYNYYED+TPK+VVEIVE+LRKGE PP GTQN  RI  GPEGGNTTL
Sbjct: 180 ITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRKGEKPPHGTQNPKRIKCGPEGGNTTL 239

Query: 764 LGDPKPPPCRDLDAC 808
            G+PKPPPCRDLD+C
Sbjct: 240 HGEPKPPPCRDLDSC 254