BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001119
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001068150.1| Os11g0579800 [Oryza sativa Japonica Group] g...   204   6e-51
gb|EAY81419.1| hypothetical protein OsI_36586 [Oryza sativa Indi...   204   6e-51
ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein ...   204   8e-51
ref|XP_002319696.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
ref|XP_002525428.1| H/ACA ribonucleoprotein complex subunit, put...   197   6e-49

>ref|NP_001068150.1| Os11g0579800 [Oryza sativa Japonica Group]
           gi|77551701|gb|ABA94498.1| H/ACA ribonucleoprotein
           complex subunit 1-like protein 1, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113645372|dbj|BAF28513.1| Os11g0579800 [Oryza sativa
           Japonica Group] gi|125577612|gb|EAZ18834.1| hypothetical
           protein OsJ_34372 [Oryza sativa Japonica Group]
           gi|215768512|dbj|BAH00741.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 196

 Score =  204 bits (519), Expect = 6e-51
 Identities = 94/108 (87%), Positives = 105/108 (97%)
 Frame = +2

Query: 29  FRDEGPPSEVVEVASFLHACEGDAVIKLTHEKIPYFNAPIYLQNKTQIGKVDEIFGPINE 208
           FRDEGPP+EVVEV++F+HACEGDAV KLT+EK+PYFNAPIYLQNKTQIGKVDEIFGPINE
Sbjct: 44  FRDEGPPAEVVEVSTFMHACEGDAVTKLTNEKVPYFNAPIYLQNKTQIGKVDEIFGPINE 103

Query: 209 SLFSVKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQSQGGGR 352
           SLFS+KM+EGI+ATSY+ GDKFYIDP KLLPL+RFLPQPKGQSQGGGR
Sbjct: 104 SLFSIKMLEGIIATSYSEGDKFYIDPMKLLPLSRFLPQPKGQSQGGGR 151


>gb|EAY81419.1| hypothetical protein OsI_36586 [Oryza sativa Indica Group]
          Length = 196

 Score =  204 bits (519), Expect = 6e-51
 Identities = 94/108 (87%), Positives = 105/108 (97%)
 Frame = +2

Query: 29  FRDEGPPSEVVEVASFLHACEGDAVIKLTHEKIPYFNAPIYLQNKTQIGKVDEIFGPINE 208
           FRDEGPP+EVVEV++F+HACEGDAV KLT+EK+PYFNAPIYLQNKTQIGKVDEIFGPINE
Sbjct: 44  FRDEGPPAEVVEVSTFMHACEGDAVTKLTNEKVPYFNAPIYLQNKTQIGKVDEIFGPINE 103

Query: 209 SLFSVKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQSQGGGR 352
           SLFS+KM+EGI+ATSY+ GDKFYIDP KLLPL+RFLPQPKGQSQGGGR
Sbjct: 104 SLFSIKMLEGIIATSYSEGDKFYIDPMKLLPLSRFLPQPKGQSQGGGR 151


>ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Cucumis sativus]
           gi|449484903|ref|XP_004157013.1| PREDICTED: putative
           H/ACA ribonucleoprotein complex subunit 1-like protein
           1-like [Cucumis sativus]
          Length = 194

 Score =  204 bits (518), Expect = 8e-51
 Identities = 100/110 (90%), Positives = 106/110 (96%), Gaps = 2/110 (1%)
 Frame = +2

Query: 29  FRDEGPPSEVVEVASFLHACEGDAVIKLTHEKIPYFNAPIYLQNKTQIGKVDEIFGPINE 208
           FRDEGPPSEVVEV++FLHACEGDAV KLT+EKIP+FNAPIYLQNKTQIGKVDEIFGPINE
Sbjct: 40  FRDEGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINE 99

Query: 209 SLFSVKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ--SQGGGR 352
           S FS+KMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ  S+GGGR
Sbjct: 100 SYFSIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQFPSRGGGR 149


>ref|XP_002319696.1| predicted protein [Populus trichocarpa] gi|222858072|gb|EEE95619.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  199 bits (507), Expect = 1e-49
 Identities = 95/106 (89%), Positives = 102/106 (96%)
 Frame = +2

Query: 29  FRDEGPPSEVVEVASFLHACEGDAVIKLTHEKIPYFNAPIYLQNKTQIGKVDEIFGPINE 208
           FRDEGPPSEV+EV+SFLHACEGDAV KLT+EKIPYFNAPI+LQNKTQIGKVDEIFGPINE
Sbjct: 52  FRDEGPPSEVIEVSSFLHACEGDAVTKLTNEKIPYFNAPIFLQNKTQIGKVDEIFGPINE 111

Query: 209 SLFSVKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQSQGG 346
           S FS+KMMEGIVATSYA GDKFYIDP+KLLPLARFL QPKGQ+QGG
Sbjct: 112 SYFSIKMMEGIVATSYAPGDKFYIDPSKLLPLARFLTQPKGQAQGG 157


>ref|XP_002525428.1| H/ACA ribonucleoprotein complex subunit, putative [Ricinus
           communis] gi|223535241|gb|EEF36918.1| H/ACA
           ribonucleoprotein complex subunit, putative [Ricinus
           communis]
          Length = 194

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/108 (87%), Positives = 101/108 (93%)
 Frame = +2

Query: 29  FRDEGPPSEVVEVASFLHACEGDAVIKLTHEKIPYFNAPIYLQNKTQIGKVDEIFGPINE 208
           FRDEGPPSEV+EV++FLHACEGDAV KLT+EKIPYFNAPI+L+NKTQIGKVDEIFGPINE
Sbjct: 37  FRDEGPPSEVIEVSTFLHACEGDAVTKLTNEKIPYFNAPIFLENKTQIGKVDEIFGPINE 96

Query: 209 SLFSVKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQSQGGGR 352
           S FSVKMMEGIVATSY  GDKFYIDP KLLPL RFLPQPKGQ+Q GGR
Sbjct: 97  SYFSVKMMEGIVATSYKPGDKFYIDPYKLLPLERFLPQPKGQAQAGGR 144