BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001116
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277425.1| PREDICTED: 60S ribosomal protein L27-3 isofo...   240   1e-61
ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis ...   236   2e-60
emb|CAN79575.1| hypothetical protein VITISV_032808 [Vitis vinifera]   234   7e-60
gb|AFW90619.1| ribosomal protein L27 [Solanum tuberosum]              233   2e-59
dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]                 233   2e-59

>ref|XP_002277425.1| PREDICTED: 60S ribosomal protein L27-3 isoform 1 [Vitis vinifera]
          Length = 135

 Score =  240 bits (612), Expect = 1e-61
 Identities = 118/138 (85%), Positives = 129/138 (93%)
 Frame = -1

Query: 434 MVKFLKANKAVIVLQGRYAGRKAVILRSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK 255
           MVKFLK NKAV+VLQGR+AGRKAVI+RSFD+GTRDRPYGHCLVAGI+KYPKKVIRKDSAK
Sbjct: 1   MVKFLKQNKAVVVLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAK 60

Query: 254 KTAKKSRVKTFIKVVNYNHIMPTRYTLDVDLKDVVGGTTSEIFQSKDKKLTAAKEVKARF 75
           KTAKKSRVK FIK+VNYNH+MPTRYTLDVDLKDVV   T +  QS+DKK+TAAKE KARF
Sbjct: 61  KTAKKSRVKAFIKLVNYNHLMPTRYTLDVDLKDVV---TVDALQSRDKKVTAAKETKARF 117

Query: 74  EERFKTGKNRWFFSKLRF 21
           EERFKTGKNRWFF+KLRF
Sbjct: 118 EERFKTGKNRWFFTKLRF 135


>ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis vinifera]
          Length = 135

 Score =  236 bits (601), Expect = 2e-60
 Identities = 115/138 (83%), Positives = 128/138 (92%)
 Frame = -1

Query: 434 MVKFLKANKAVIVLQGRYAGRKAVILRSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK 255
           MVKFLK NKAV++LQGR+AGRKAVI+RSFD+GTRDRPYGHCLVAGI+KYPKKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVVLLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAK 60

Query: 254 KTAKKSRVKTFIKVVNYNHIMPTRYTLDVDLKDVVGGTTSEIFQSKDKKLTAAKEVKARF 75
           KTAKKSRVK FIK+VNYNHIMPTRYTLDVDLKDVV   + ++ QS+DKK+TAAKE K + 
Sbjct: 61  KTAKKSRVKAFIKLVNYNHIMPTRYTLDVDLKDVV---SPDVLQSRDKKVTAAKETKKKL 117

Query: 74  EERFKTGKNRWFFSKLRF 21
           EERFKTGKNRWFFSKLRF
Sbjct: 118 EERFKTGKNRWFFSKLRF 135


>emb|CAN79575.1| hypothetical protein VITISV_032808 [Vitis vinifera]
          Length = 135

 Score =  234 bits (596), Expect = 7e-60
 Identities = 114/138 (82%), Positives = 128/138 (92%)
 Frame = -1

Query: 434 MVKFLKANKAVIVLQGRYAGRKAVILRSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK 255
           MVKFLK NKAV++LQGR+AGRKAVI+RSFD+GTRDRPYGHCLVAGI+KYPKKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVVLLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAK 60

Query: 254 KTAKKSRVKTFIKVVNYNHIMPTRYTLDVDLKDVVGGTTSEIFQSKDKKLTAAKEVKARF 75
           KTAKKSRVK FIK+VNYNHIMPTRYTLDV+LKDVV   + ++ QS+DKK+TAAKE K + 
Sbjct: 61  KTAKKSRVKAFIKLVNYNHIMPTRYTLDVNLKDVV---SPDVLQSRDKKVTAAKETKKKL 117

Query: 74  EERFKTGKNRWFFSKLRF 21
           EERFKTGKNRWFFSKLRF
Sbjct: 118 EERFKTGKNRWFFSKLRF 135


>gb|AFW90619.1| ribosomal protein L27 [Solanum tuberosum]
          Length = 135

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/138 (81%), Positives = 127/138 (92%)
 Frame = -1

Query: 434 MVKFLKANKAVIVLQGRYAGRKAVILRSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK 255
           MVKFLK NKAV+VLQG+YAGRKAVI+R+FD+GTRDRPYGHCLVAG++KYPKKV+RKDSAK
Sbjct: 1   MVKFLKPNKAVVVLQGKYAGRKAVIVRAFDDGTRDRPYGHCLVAGVAKYPKKVVRKDSAK 60

Query: 254 KTAKKSRVKTFIKVVNYNHIMPTRYTLDVDLKDVVGGTTSEIFQSKDKKLTAAKEVKARF 75
           K A KSRVKTFIK+VNYNHIMPTRYTLDVDLK+ V   T +  QS+DKK+TAAKE KA+F
Sbjct: 61  KQANKSRVKTFIKLVNYNHIMPTRYTLDVDLKEAV---TVDCLQSRDKKVTAAKEAKAKF 117

Query: 74  EERFKTGKNRWFFSKLRF 21
           EERFKTGKNRWFF+KLRF
Sbjct: 118 EERFKTGKNRWFFTKLRF 135


>dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]
          Length = 135

 Score =  233 bits (593), Expect = 2e-59
 Identities = 117/138 (84%), Positives = 125/138 (90%)
 Frame = -1

Query: 434 MVKFLKANKAVIVLQGRYAGRKAVILRSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK 255
           MVK LK NKAVIVL GRYAGRK+VI++SFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK
Sbjct: 1   MVKVLKPNKAVIVLNGRYAGRKSVIIKSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK 60

Query: 254 KTAKKSRVKTFIKVVNYNHIMPTRYTLDVDLKDVVGGTTSEIFQSKDKKLTAAKEVKARF 75
           KTAKKSRVK FIK+VN NHIMPTRYTLDVDLKDVV   T +  QS+DKK+TAAKE KAR 
Sbjct: 61  KTAKKSRVKAFIKLVNCNHIMPTRYTLDVDLKDVV---TVDCLQSRDKKVTAAKETKARL 117

Query: 74  EERFKTGKNRWFFSKLRF 21
           EERFKTGKNRWFF+KLRF
Sbjct: 118 EERFKTGKNRWFFTKLRF 135