BLASTX nr result

ID: Coptis24_contig00001101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001101
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis...   308   2e-81
ref|XP_002532881.1| DAG protein, chloroplast precursor, putative...   302   9e-80
ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|2...   295   2e-77
gb|AFK35502.1| unknown [Medicago truncatula]                          294   3e-77
gb|ABK95784.1| unknown [Populus trichocarpa]                          293   7e-77

>ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis vinifera]
           gi|147779193|emb|CAN67991.1| hypothetical protein
           VITISV_023920 [Vitis vinifera]
          Length = 233

 Score =  308 bits (789), Expect = 2e-81
 Identities = 154/192 (80%), Positives = 169/192 (88%), Gaps = 2/192 (1%)
 Frame = +3

Query: 153 SKPLIWNQRKPSLLLSHSLRVLNPSI--TTRFNTQIRNRVHRSGGDSSYSPLNSGSNFSD 326
           S P +   R+PS+  S +LRV++P    ++RF T +R RV+RSG   SYSPLNSGSNFSD
Sbjct: 27  SHPRLLLTRRPSVQFSRALRVVSPGSAGSSRF-TPVRCRVNRSG--DSYSPLNSGSNFSD 83

Query: 327 RPPTEMAPLFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKKKIYNV 506
           RPPTEMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCY++TLA+V+GS EEAKKKIYNV
Sbjct: 84  RPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNV 143

Query: 507 SCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGEIVQRSPERQ 686
           SCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD E KDYGAEL+VNGEIVQRSPERQ
Sbjct: 144 SCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQ 203

Query: 687 RRVEPVPQRAQD 722
           RRVEP PQRAQD
Sbjct: 204 RRVEPAPQRAQD 215


>ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
           gi|223527366|gb|EEF29510.1| DAG protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 248

 Score =  302 bits (774), Expect = 9e-80
 Identities = 151/188 (80%), Positives = 165/188 (87%)
 Frame = +3

Query: 159 PLIWNQRKPSLLLSHSLRVLNPSITTRFNTQIRNRVHRSGGDSSYSPLNSGSNFSDRPPT 338
           P +   R+  L LSH++  + P   TRF T IR RV+R+G +S+YSPLNSGSNFSDRPP 
Sbjct: 48  PSLLFTRRSLLPLSHAVHSIKP---TRF-TSIRCRVNRAG-NSAYSPLNSGSNFSDRPPN 102

Query: 339 EMAPLFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKKKIYNVSCER 518
           EMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCY++TLA+V+GS EEAKKKIYNVSCER
Sbjct: 103 EMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCER 162

Query: 519 YFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGEIVQRSPERQRRVE 698
           YFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD ENKDYGAEL+VNGEIVQRSPERQRRVE
Sbjct: 163 YFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVE 222

Query: 699 PVPQRAQD 722
           P PQRA D
Sbjct: 223 PQPQRAND 230


>ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|222852411|gb|EEE89958.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  295 bits (754), Expect = 2e-77
 Identities = 150/189 (79%), Positives = 163/189 (86%), Gaps = 2/189 (1%)
 Frame = +3

Query: 162 LIWNQRKPSLLLSHSLRVLNPSIT--TRFNTQIRNRVHRSGGDSSYSPLNSGSNFSDRPP 335
           L+  Q  PSL  SH+L+ +N + +   RF T IR RV+R+G +S YSPLNSGSNFSDRPP
Sbjct: 39  LLCGQSLPSL--SHNLQSINKTTSPAARF-TSIRCRVNRAG-NSGYSPLNSGSNFSDRPP 94

Query: 336 TEMAPLFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKKKIYNVSCE 515
            EMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCY+ETLA+V+GS EEAK KIYNVSCE
Sbjct: 95  NEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIETLAKVVGSEEEAKTKIYNVSCE 154

Query: 516 RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGEIVQRSPERQRRV 695
           RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD E KDYGAEL+VNGEIVQR PERQRRV
Sbjct: 155 RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRPPERQRRV 214

Query: 696 EPVPQRAQD 722
           EP PQRA D
Sbjct: 215 EPQPQRAND 223


>gb|AFK35502.1| unknown [Medicago truncatula]
          Length = 217

 Score =  294 bits (752), Expect = 3e-77
 Identities = 149/184 (80%), Positives = 165/184 (89%), Gaps = 4/184 (2%)
 Frame = +3

Query: 183 PSLLLSHSLR---VLNPSITTRFNTQIRNRVHRSGGDSSYSPLNSG-SNFSDRPPTEMAP 350
           P+ LLS S R    + PS + RF T ++ RV+R+G +S+YSPLNSG SNFS+RPPT+MAP
Sbjct: 18  PNRLLSSSTRRPSQVTPSSSFRFTT-VQCRVNRAG-NSTYSPLNSGNSNFSERPPTDMAP 75

Query: 351 LFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKKKIYNVSCERYFGF 530
           LFPGCDYEHWLIVMDKPGGEGA+KQQMIDCYV+TLA+VLGS EEAKKKIYNVSCERYFGF
Sbjct: 76  LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGF 135

Query: 531 GCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGEIVQRSPERQRRVEPVPQ 710
           GCEIDEETSNKLEGLPGVLFVLPDSYVD ENKDYGAEL+VNGEIVQRSPERQ+RVEP PQ
Sbjct: 136 GCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQKRVEPQPQ 195

Query: 711 RAQD 722
           R QD
Sbjct: 196 RHQD 199


>gb|ABK95784.1| unknown [Populus trichocarpa]
          Length = 241

 Score =  293 bits (749), Expect = 7e-77
 Identities = 144/190 (75%), Positives = 160/190 (84%)
 Frame = +3

Query: 153 SKPLIWNQRKPSLLLSHSLRVLNPSITTRFNTQIRNRVHRSGGDSSYSPLNSGSNFSDRP 332
           S P +   R+    LSH+L+ +N +      T IR RV+R+G +S YSPLNSGSNFSDRP
Sbjct: 35  SLPTVLPCRQSLPSLSHALQSINKTTNPTRFTSIRCRVNRAG-NSGYSPLNSGSNFSDRP 93

Query: 333 PTEMAPLFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKKKIYNVSC 512
           P EMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCY++TL++V+GS EEAK KIYNVSC
Sbjct: 94  PNEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLSKVVGSEEEAKNKIYNVSC 153

Query: 513 ERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGEIVQRSPERQRR 692
           ERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD E KDYGAEL+VNGEIVQR PERQ+R
Sbjct: 154 ERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRPPERQKR 213

Query: 693 VEPVPQRAQD 722
           VEP PQRA D
Sbjct: 214 VEPQPQRAND 223


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