BLASTX nr result

ID: Coptis24_contig00001075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001075
         (1821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25685.1| unknown [Picea sitchensis]                             149   3e-33
ref|XP_002326335.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-32
ref|XP_002529708.1| Mitochondrial import inner membrane transloc...   142   3e-31
ref|XP_002279532.1| PREDICTED: mitochondrial import inner membra...   142   4e-31
ref|XP_002311111.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-31

>gb|ABK25685.1| unknown [Picea sitchensis]
          Length = 112

 Score =  149 bits (375), Expect = 3e-33
 Identities = 67/88 (76%), Positives = 78/88 (88%)
 Frame = +2

Query: 188 WQAFKARPPTARLRKFYDGGFEPSMTRREASRILNVRESAPPDKIKDAHRKIMAANHPDR 367
           WQAFKARPPT RLRKFY+GGF+P+MTRREA+ IL +RE AP DK+K+AHRK+M ANHPD 
Sbjct: 25  WQAFKARPPTPRLRKFYEGGFQPTMTRREAALILGLREGAPADKVKEAHRKVMVANHPDA 84

Query: 368 GGSGYLARKINEAKDMLLGKTKGGGSAF 451
           GGS YLA K+NEAKD++LGKTK GGSAF
Sbjct: 85  GGSDYLASKVNEAKDVMLGKTKSGGSAF 112


>ref|XP_002326335.1| predicted protein [Populus trichocarpa] gi|222833528|gb|EEE72005.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  145 bits (367), Expect = 3e-32
 Identities = 68/88 (77%), Positives = 77/88 (87%)
 Frame = +2

Query: 188 WQAFKARPPTARLRKFYDGGFEPSMTRREASRILNVRESAPPDKIKDAHRKIMAANHPDR 367
           WQAFKARPPTAR+RKFY+GGF+  MTRREA+ IL VRES   DK+K+AHR++M ANHPD 
Sbjct: 25  WQAFKARPPTARMRKFYEGGFQSVMTRREAALILGVRESTAADKVKEAHRRVMVANHPDA 84

Query: 368 GGSGYLARKINEAKDMLLGKTKGGGSAF 451
           GGS YLA KINEAKD+LLGKTKGGGSAF
Sbjct: 85  GGSHYLASKINEAKDILLGKTKGGGSAF 112


>ref|XP_002529708.1| Mitochondrial import inner membrane translocase subunit TIM14,
           putative [Ricinus communis] gi|223530810|gb|EEF32674.1|
           Mitochondrial import inner membrane translocase subunit
           TIM14, putative [Ricinus communis]
          Length = 112

 Score =  142 bits (358), Expect = 3e-31
 Identities = 68/112 (60%), Positives = 78/112 (69%)
 Frame = +2

Query: 116 MGTPFXXXXXXXXXXXXXXXXXXXWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 295
           M TPF                   WQAFKARPP  + RKFYDGGF+P MTRREA+ IL +
Sbjct: 1   MATPFFAGLAVAAAALAGRYGIQAWQAFKARPPKPKFRKFYDGGFQPKMTRREAALILGI 60

Query: 296 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 451
           RE+A  DK+K+AHRK+M ANHPD GGS YLA KINEAKD +LGKT+ GGSAF
Sbjct: 61  RENATADKVKEAHRKVMVANHPDAGGSHYLASKINEAKDTMLGKTRDGGSAF 112


>ref|XP_002279532.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM14-like [Vitis vinifera]
          Length = 110

 Score =  142 bits (357), Expect = 4e-31
 Identities = 70/112 (62%), Positives = 80/112 (71%)
 Frame = +2

Query: 116 MGTPFXXXXXXXXXXXXXXXXXXXWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 295
           MGTP                    WQAFKARPPT  LRKFY+GGF+P+MTRREA+ IL +
Sbjct: 1   MGTPLVAGLAVAAAALAGRYGIQAWQAFKARPPT--LRKFYEGGFQPTMTRREAALILGI 58

Query: 296 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 451
           RES P DK+K+AHRK+M ANHPD GGS YLA KINEAKDM+LGKT+G  SAF
Sbjct: 59  RESTPADKVKEAHRKVMVANHPDAGGSHYLASKINEAKDMMLGKTRGSESAF 110


>ref|XP_002311111.1| predicted protein [Populus trichocarpa] gi|222850931|gb|EEE88478.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  142 bits (357), Expect = 4e-31
 Identities = 67/112 (59%), Positives = 80/112 (71%)
 Frame = +2

Query: 116 MGTPFXXXXXXXXXXXXXXXXXXXWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 295
           M TPF                   WQ+FKARPP  R+RKFYDGGF+P MTRREA+ IL +
Sbjct: 1   MATPFLAGLAIAAAALAGKYGVQAWQSFKARPPKPRIRKFYDGGFQPKMTRREAALILGI 60

Query: 296 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 451
           RE+A  +K+K+AHR++M ANHPD GGS YLA KINEAKD++LGKTK GGSAF
Sbjct: 61  RENAGAEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKDGGSAF 112


Top