BLASTX nr result
ID: Coptis24_contig00001075
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00001075 (1821 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK25685.1| unknown [Picea sitchensis] 149 3e-33 ref|XP_002326335.1| predicted protein [Populus trichocarpa] gi|2... 145 3e-32 ref|XP_002529708.1| Mitochondrial import inner membrane transloc... 142 3e-31 ref|XP_002279532.1| PREDICTED: mitochondrial import inner membra... 142 4e-31 ref|XP_002311111.1| predicted protein [Populus trichocarpa] gi|2... 142 4e-31 >gb|ABK25685.1| unknown [Picea sitchensis] Length = 112 Score = 149 bits (375), Expect = 3e-33 Identities = 67/88 (76%), Positives = 78/88 (88%) Frame = +2 Query: 188 WQAFKARPPTARLRKFYDGGFEPSMTRREASRILNVRESAPPDKIKDAHRKIMAANHPDR 367 WQAFKARPPT RLRKFY+GGF+P+MTRREA+ IL +RE AP DK+K+AHRK+M ANHPD Sbjct: 25 WQAFKARPPTPRLRKFYEGGFQPTMTRREAALILGLREGAPADKVKEAHRKVMVANHPDA 84 Query: 368 GGSGYLARKINEAKDMLLGKTKGGGSAF 451 GGS YLA K+NEAKD++LGKTK GGSAF Sbjct: 85 GGSDYLASKVNEAKDVMLGKTKSGGSAF 112 >ref|XP_002326335.1| predicted protein [Populus trichocarpa] gi|222833528|gb|EEE72005.1| predicted protein [Populus trichocarpa] Length = 112 Score = 145 bits (367), Expect = 3e-32 Identities = 68/88 (77%), Positives = 77/88 (87%) Frame = +2 Query: 188 WQAFKARPPTARLRKFYDGGFEPSMTRREASRILNVRESAPPDKIKDAHRKIMAANHPDR 367 WQAFKARPPTAR+RKFY+GGF+ MTRREA+ IL VRES DK+K+AHR++M ANHPD Sbjct: 25 WQAFKARPPTARMRKFYEGGFQSVMTRREAALILGVRESTAADKVKEAHRRVMVANHPDA 84 Query: 368 GGSGYLARKINEAKDMLLGKTKGGGSAF 451 GGS YLA KINEAKD+LLGKTKGGGSAF Sbjct: 85 GGSHYLASKINEAKDILLGKTKGGGSAF 112 >ref|XP_002529708.1| Mitochondrial import inner membrane translocase subunit TIM14, putative [Ricinus communis] gi|223530810|gb|EEF32674.1| Mitochondrial import inner membrane translocase subunit TIM14, putative [Ricinus communis] Length = 112 Score = 142 bits (358), Expect = 3e-31 Identities = 68/112 (60%), Positives = 78/112 (69%) Frame = +2 Query: 116 MGTPFXXXXXXXXXXXXXXXXXXXWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 295 M TPF WQAFKARPP + RKFYDGGF+P MTRREA+ IL + Sbjct: 1 MATPFFAGLAVAAAALAGRYGIQAWQAFKARPPKPKFRKFYDGGFQPKMTRREAALILGI 60 Query: 296 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 451 RE+A DK+K+AHRK+M ANHPD GGS YLA KINEAKD +LGKT+ GGSAF Sbjct: 61 RENATADKVKEAHRKVMVANHPDAGGSHYLASKINEAKDTMLGKTRDGGSAF 112 >ref|XP_002279532.1| PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-like [Vitis vinifera] Length = 110 Score = 142 bits (357), Expect = 4e-31 Identities = 70/112 (62%), Positives = 80/112 (71%) Frame = +2 Query: 116 MGTPFXXXXXXXXXXXXXXXXXXXWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 295 MGTP WQAFKARPPT LRKFY+GGF+P+MTRREA+ IL + Sbjct: 1 MGTPLVAGLAVAAAALAGRYGIQAWQAFKARPPT--LRKFYEGGFQPTMTRREAALILGI 58 Query: 296 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 451 RES P DK+K+AHRK+M ANHPD GGS YLA KINEAKDM+LGKT+G SAF Sbjct: 59 RESTPADKVKEAHRKVMVANHPDAGGSHYLASKINEAKDMMLGKTRGSESAF 110 >ref|XP_002311111.1| predicted protein [Populus trichocarpa] gi|222850931|gb|EEE88478.1| predicted protein [Populus trichocarpa] Length = 112 Score = 142 bits (357), Expect = 4e-31 Identities = 67/112 (59%), Positives = 80/112 (71%) Frame = +2 Query: 116 MGTPFXXXXXXXXXXXXXXXXXXXWQAFKARPPTARLRKFYDGGFEPSMTRREASRILNV 295 M TPF WQ+FKARPP R+RKFYDGGF+P MTRREA+ IL + Sbjct: 1 MATPFLAGLAIAAAALAGKYGVQAWQSFKARPPKPRIRKFYDGGFQPKMTRREAALILGI 60 Query: 296 RESAPPDKIKDAHRKIMAANHPDRGGSGYLARKINEAKDMLLGKTKGGGSAF 451 RE+A +K+K+AHR++M ANHPD GGS YLA KINEAKD++LGKTK GGSAF Sbjct: 61 RENAGAEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKDGGSAF 112