BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001071
         (3931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...   325   e-117
ref|XP_003608262.1| hypothetical protein MTR_4g091430 [Medicago ...   218   3e-66
ref|ZP_01227369.1| conserved hypothetical protein [Aurantimonas ...   158   2e-42
ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabac...   173   5e-42
ref|ZP_05069441.1| cell wall-associated hydrolase [Candidatus Pe...   158   2e-41

>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
            gi|355477403|gb|AES58606.1| Mitochondrial protein,
            putative [Medicago truncatula]
          Length = 1106

 Score =  288 bits (737), Expect(3) = e-117
 Identities = 159/235 (67%), Positives = 163/235 (69%), Gaps = 1/235 (0%)
 Frame = -1

Query: 703  FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGYHLLWPD 524
            FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQG HLLWPD
Sbjct: 886  FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGSHLLWPD 945

Query: 523  LPTFSQLQFTARVGFEAVACCLLVFPSSNPQQIE*NLAKNKLTLC*GARKRMRVXXXXXX 344
            LPTFSQLQFTA     A AC     P  N         K+  T     RKR         
Sbjct: 946  LPTFSQLQFTAPFKC-AGACWFFHHPIHN---------KSNETW----RKRSE------- 984

Query: 343  XXXXXXXXXXXXXXXXXXXXGRSSLAC*QDVF-FFKAPIRSRSPLLTGSRLISLPLATQM 167
                                        + VF F + PIRSRSPLLTGSRLISLPLAT+M
Sbjct: 985  ------------------HFAAEEFIILERVFVFLQTPIRSRSPLLTGSRLISLPLATKM 1026

Query: 166  FQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH 2
            FQFAKFEKSKERRLA ELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH
Sbjct: 1027 FQFAKFEKSKERRLAAELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH 1081



 Score =  139 bits (349), Expect(3) = e-117
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = -3

Query: 1157 IRSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 978
            + SFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH
Sbjct: 800  LSSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPH 859

Query: 977  TWVRSSKA 954
            TWVRSSKA
Sbjct: 860  TWVRSSKA 867



 Score = 46.2 bits (108), Expect(3) = e-117
 Identities = 21/26 (80%), Positives = 21/26 (80%), Gaps = 4/26 (15%)
 Frame = -2

Query: 879 HLW----KAPTPNGLSRCSHFLADPS 814
           H W    KAPTPNGLSRCSHFLADPS
Sbjct: 859 HTWVRSSKAPTPNGLSRCSHFLADPS 884



 Score =  325 bits (834), Expect(2) = 1e-94
 Identities = 164/191 (85%), Positives = 164/191 (85%)
 Frame = -3

Query: 3128 PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRTVRVTAAVYRGFHSKLIT 2949
            PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRTVRVTAAVYRGFHSKLIT
Sbjct: 517  PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRTVRVTAAVYRGFHSKLIT 576

Query: 2948 LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGEHPFSRSYGVILPSS 2769
            LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGEHPFSRSYGVILPSS
Sbjct: 577  LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGEHPFSRSYGVILPSS 636

Query: 2768 FDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFEVFSWKFQPC*L*QQSRL*TDSRLWQG 2589
            FDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFE                         G
Sbjct: 637  FDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFE-------------------------G 671

Query: 2588 SKLCSLATPTL 2556
              LCSLATPTL
Sbjct: 672  GTLCSLATPTL 682



 Score = 50.8 bits (120), Expect(2) = 1e-94
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = -2

Query: 3243 EWSFRIGRCVSPPPTYPTHSIKVVT 3169
            +WSFRIGR VS PPTYPTHSIKVVT
Sbjct: 492  KWSFRIGRSVSSPPTYPTHSIKVVT 516



 Score =  147 bits (372), Expect = 2e-32
 Identities = 78/113 (69%), Positives = 83/113 (73%)
 Frame = -1

Query: 3619 NRTLGTFFNPRM**VDIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFR 3440
            NRT+     P    +DIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFR
Sbjct: 410  NRTVSRRSKPNS--LDIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFR 467

Query: 3439 LCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*EASAPDKLPTSQCPAPPP 3281
            LCSTSRSHSQAGLYHYAHEQNLSL        ++   S+P   PT       P
Sbjct: 468  LCSTSRSHSQAGLYHYAHEQNLSLKWSFRIGRSV---SSPPTYPTHSIKVVTP 517



 Score =  135 bits (339), Expect = 1e-28
 Identities = 82/140 (58%), Positives = 83/140 (59%)
 Frame = -1

Query: 1702 RSSNSLQQTGMVQ*SKQLRHFRVPIGRQPXXXXXXXXXXXXXXXXXRKPSTGRRSCFSQD 1523
            R S      G V+ SKQLRHFRVPIGRQP                 RKPSTGRRSCFSQD
Sbjct: 693  RQSRRATGPGRVRKSKQLRHFRVPIGRQPFRGFLRDRLTLRRLTERRKPSTGRRSCFSQD 752

Query: 1522 FSLLMSAFSLLISPGVVTKNLPRLTERPATDT*KSSFQGLVASVNHLSPDTFSVPWS*TS 1343
             SLLMSAFSLLISPGVVTKNLPRLTERP                              TS
Sbjct: 753  LSLLMSAFSLLISPGVVTKNLPRLTERP------------------------------TS 782

Query: 1342 ELLRFLQRMAASKPTSWLSS 1283
            ELLRFLQRMAASKPTSWLSS
Sbjct: 783  ELLRFLQRMAASKPTSWLSS 802



 Score =  111 bits (278), Expect = 1e-21
 Identities = 61/96 (63%), Positives = 62/96 (64%)
 Frame = -3

Query: 3929 RLVRDRFTPRGAYTSRLSKFCSKTSYENLYREGFPAAQQFFHTNLAARRCYWHNNRYTIG 3750
            RLVRDRFTPRGAYTSRLSKFCSKTS+ENLYREGFP                         
Sbjct: 360  RLVRDRFTPRGAYTSRLSKFCSKTSFENLYREGFP------------------------- 394

Query: 3749 WPNPVLSY*GWLLAVLPLTPTVDRNRTVSRRSKPNS 3642
                     GWLLAVLPLTPTVDRNRTVSRRSKPNS
Sbjct: 395  ---------GWLLAVLPLTPTVDRNRTVSRRSKPNS 421


>ref|XP_003608262.1| hypothetical protein MTR_4g091430 [Medicago truncatula]
            gi|355509317|gb|AES90459.1| hypothetical protein
            MTR_4g091430 [Medicago truncatula]
          Length = 167

 Score =  218 bits (556), Expect(2) = 3e-66
 Identities = 104/109 (95%), Positives = 105/109 (96%)
 Frame = -3

Query: 3128 PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRTVRVTAAVYRGFHSKLIT 2949
            PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLR VRVT AVYRGFHSKLIT
Sbjct: 44   PLVLRIFTENSISPGPCRRQRGSRYTIRAGRYLCDKEFRYLRKVRVTIAVYRGFHSKLIT 103

Query: 2948 LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGEHPF 2802
            LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIG+  F
Sbjct: 104  LLLPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQKIGDLSF 152



 Score = 63.5 bits (153), Expect(2) = 3e-66
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -2

Query: 3279 MIGAAVRHP*TKEWSFRIGRCVSPPPTYPTHSIKVVT 3169
            +   AV+HP TKEWSFRIGR V+ PPTYPTHSIKVVT
Sbjct: 7    LANVAVKHPYTKEWSFRIGRSVTSPPTYPTHSIKVVT 43


>ref|ZP_01227369.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1]
            gi|90336396|gb|EAS50137.1| conserved hypothetical protein
            [Aurantimonas manganoxydans SI85-9A1]
          Length = 152

 Score =  158 bits (400), Expect(2) = 2e-42
 Identities = 81/105 (77%), Positives = 87/105 (82%)
 Frame = -3

Query: 3692 PTVDRNRTVSRRSKPNSRTT*IGEQPNPWDLLQPQDVMSRHRGAKRLRR*ELLGVISLLS 3513
            PT DR+RTVSRRS+P+SRT  IGEQPNPWDLLQPQD MSRHRGAK+ RR  LLGVISLLS
Sbjct: 44   PTADRDRTVSRRSEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLLS 103

Query: 3512 PAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRSRAE 3378
            PAYL SVER PFH G PDHY RLSSL D SVSQSG L+PL S  +
Sbjct: 104  PAYLLSVERWPFHAGPPDHYDRLSSLLDLSVSQSGGLMPLHSTTD 148



 Score = 43.9 bits (102), Expect(2) = 2e-42
 Identities = 25/46 (54%), Positives = 28/46 (60%)
 Frame = -2

Query: 3819 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSSPFNTNGR 3682
            +AV+P   S PAL LA Q VH R  QP PLVLG  P +SP  T  R
Sbjct: 3    SAVIPTVHSYPALRLAPQQVHQRYVQPGPLVLGSDPVNSPAPTADR 48


>ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabacum]
           gi|57014030|ref|YP_173501.1| hypothetical protein
           NitaMp164 [Nicotiana tabacum]
           gi|56806536|dbj|BAD83437.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
           gi|56806666|dbj|BAD83567.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 138

 Score =  173 bits (439), Expect(2) = 5e-42
 Identities = 83/93 (89%), Positives = 87/93 (93%)
 Frame = -1

Query: 280 RSSLAC*QDVFFFKAPIRSRSPLLTGSRLISLPLATQMFQFAKFEKSKERRLATELGYGF 101
           R+  +C   +FFFK PIRSRSPLLTGSRLISLPLAT+MFQFAKFEKSKERRLATELGYGF
Sbjct: 13  RNEASC---LFFFKPPIRSRSPLLTGSRLISLPLATKMFQFAKFEKSKERRLATELGYGF 69

Query: 100 PIGDPWITDGISPWPFASESVLPSQCPGIHPMH 2
           PIGDPWITDGISPWPFASESVLPSQCPGIHPMH
Sbjct: 70  PIGDPWITDGISPWPFASESVLPSQCPGIHPMH 102



 Score = 27.3 bits (59), Expect(2) = 5e-42
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -3

Query: 422 MKPGEK*VNTLLRSK 378
           MKPGEK VNTLLR++
Sbjct: 1   MKPGEKEVNTLLRNE 15


>ref|ZP_05069441.1| cell wall-associated hydrolase [Candidatus Pelagibacter sp. HTCC7211]
            gi|207083014|gb|EDZ60440.1| cell wall-associated
            hydrolase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 149

 Score =  158 bits (400), Expect(2) = 2e-41
 Identities = 82/103 (79%), Positives = 87/103 (84%)
 Frame = -3

Query: 3695 TPTVDRNRTVSRRSKPNSRTT*IGEQPNPWDLLQPQDVMSRHRGAKRLRR*ELLGVISLL 3516
            T   DR+RTVSRRS+P+SRTT IGEQPNPWDLLQPQDVMSRHRGAK  RR ELLG ISLL
Sbjct: 43   TRIADRDRTVSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKHCRRYELLGSISLL 102

Query: 3515 SPAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRS 3387
            SPAYL SVER PFH+  PDHY RLSSL D SVSQSGRL+PL S
Sbjct: 103  SPAYLLSVERWPFHSEPPDHYDRLSSLLDLSVSQSGRLMPLHS 145



 Score = 40.4 bits (93), Expect(2) = 2e-41
 Identities = 22/39 (56%), Positives = 25/39 (64%)
 Frame = -2

Query: 3819 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSS 3703
            +AV+   LS PAL LA QPVH    QP PLVLG  P +S
Sbjct: 3    SAVISSILSYPALQLALQPVHQWYVQPGPLVLGSTPLNS 41