BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001061
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   167   1e-39
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   167   1e-39
ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   156   1e-36
ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   151   6e-35
ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   149   2e-34

>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
           vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
           ubiquitin-protein ligase RING1 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score =  167 bits (422), Expect = 1e-39
 Identities = 85/174 (48%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
 Frame = +1

Query: 1   AAKSAVQGLPDVKIDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELH 180
           A+KSA++GLP ++I   LL +DSSQCAVCKD FEL  +AK MPCKHIYH DCILPWLELH
Sbjct: 192 ASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELH 251

Query: 181 NSCPVCRYELPTDDPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRS 360
           NSCPVCRYELP                            TDDPDYE+R    + +    +
Sbjct: 252 NSCPVCRYELP----------------------------TDDPDYEHRTRGGQVNQTGGN 283

Query: 361 GLTVS---LGDSGGEDSAGGVAAMQEDLASPSPRTAERRFRISFPWPFSVFGAP 513
              V+      +    +AGG A   E+    +PRTA+R FRISFPWPF  FG+P
Sbjct: 284 AAAVAAAGAASNSASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSP 337


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  167 bits (422), Expect = 1e-39
 Identities = 85/174 (48%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
 Frame = +1

Query: 1   AAKSAVQGLPDVKIDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELH 180
           A+KSA++GLP ++I   LL +DSSQCAVCKD FEL  +AK MPCKHIYH DCILPWLELH
Sbjct: 194 ASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELH 253

Query: 181 NSCPVCRYELPTDDPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRS 360
           NSCPVCRYELP                            TDDPDYE+R    + +    +
Sbjct: 254 NSCPVCRYELP----------------------------TDDPDYEHRTRGGQVNQTGGN 285

Query: 361 GLTVS---LGDSGGEDSAGGVAAMQEDLASPSPRTAERRFRISFPWPFSVFGAP 513
              V+      +    +AGG A   E+    +PRTA+R FRISFPWPF  FG+P
Sbjct: 286 AAAVAAAGAASNSASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSP 339


>ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Cucumis sativus] gi|449439503|ref|XP_004137525.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Cucumis sativus]
           gi|449439505|ref|XP_004137526.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
           sativus] gi|449503086|ref|XP_004161827.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
           sativus] gi|449503089|ref|XP_004161828.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
           sativus] gi|449503091|ref|XP_004161829.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
           sativus]
          Length = 378

 Score =  156 bits (395), Expect = 1e-36
 Identities = 87/173 (50%), Positives = 104/173 (60%), Gaps = 3/173 (1%)
 Frame = +1

Query: 1   AAKSAVQGLPDVKIDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELH 180
           A+KSA++GLPD+KI + LL +DSSQCAVCKD FEL   AKLMPCKHIYH DCI+PWLELH
Sbjct: 199 ASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMPCKHIYHADCIIPWLELH 258

Query: 181 NSCPVCRYELPTDDPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRS 360
           NSCPVCRYELP                            TDDPDYE R     A  +++S
Sbjct: 259 NSCPVCRYELP----------------------------TDDPDYEQRTRGSSAPNRSQS 290

Query: 361 GLTVSLGDS--GGEDSAGGVAAMQEDLASPSPRTAERRF-RISFPWPFSVFGA 510
             +   GDS  GGE+  G      E+  S + +  ERR  RI+FPWPF  FG+
Sbjct: 291 E-SQPFGDSSTGGENVVGSDPNSDEN--SQTQQMGERRVRRIAFPWPFRGFGS 340


>ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Glycine max] gi|356531054|ref|XP_003534093.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Glycine max]
          Length = 376

 Score =  151 bits (381), Expect = 6e-35
 Identities = 85/179 (47%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
 Frame = +1

Query: 1   AAKSAVQGLPDVKIDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELH 180
           A+KSAV+GLPDV + + LL SDSSQCAVCKD FELG  AK +PCKHIYH DCILPWLELH
Sbjct: 179 ASKSAVEGLPDVSVTEELLASDSSQCAVCKDTFELGETAKQIPCKHIYHADCILPWLELH 238

Query: 181 NSCPVCRYELPTDDPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRS 360
           NSCPVCRYELP                            TDDPDYE R            
Sbjct: 239 NSCPVCRYELP----------------------------TDDPDYEQRARRGGGGGSGGD 270

Query: 361 GL----------TVSLGDSGGE-DSAGGVAAMQEDLASPSPRTAERRFRISFPWPFSVF 504
           G            ++LG +GG  DS+GG         S    +  RRFR+S PWPF  F
Sbjct: 271 GAGSGAAPQVNWNMALGPAGGSADSSGGG-------GSGGDSSQRRRFRVSLPWPFRQF 322


>ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 369

 Score =  149 bits (377), Expect = 2e-34
 Identities = 81/176 (46%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
 Frame = +1

Query: 1   AAKSAVQGLPDVKIDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELH 180
           A+KS V+GLPDV + + LL SDSSQCAVCKD FELG  AK +PCKHIYH DCILPWLELH
Sbjct: 178 ASKSVVEGLPDVSVTEELLASDSSQCAVCKDTFELGETAKQIPCKHIYHADCILPWLELH 237

Query: 181 NSCPVCRYELPTDDPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRS 360
           NSCPVCRYELP                            TDDPDYE R     +     +
Sbjct: 238 NSCPVCRYELP----------------------------TDDPDYEQRARRGGSGGGGAA 269

Query: 361 G--------LTVSLGDSGGEDSAGGVAAMQEDLASPSPRTAERRFRISFPWPFSVF 504
           G          ++LG  G  DS+G         +     +  RRFR+S PWPF  F
Sbjct: 270 GSGAAPQVNWNMALGSGGSADSSG---------SGGGDNSQRRRFRVSLPWPFRQF 316