BLASTX nr result

ID: Coptis24_contig00001054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001054
         (1535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236365.1| squalene synthase [Glycine max] gi|2463569|d...   534   e-173
gb|ACN69082.1| squalene synthase [Diospyros kaki]                     537   e-172
ref|XP_003537842.1| PREDICTED: squalene synthase-like [Glycine max]   533   e-172
gb|AFI33135.2| squalene synthase, partial [Eriobotrya japonica]       537   e-172
gb|ACU21003.1| unknown [Glycine max]                                  531   e-172

>ref|NP_001236365.1| squalene synthase [Glycine max] gi|2463569|dbj|BAA22559.1| squalene
           synthase [Glycine max]
          Length = 413

 Score =  534 bits (1375), Expect(2) = e-173
 Identities = 254/301 (84%), Positives = 280/301 (93%)
 Frame = +1

Query: 1   AAEEIPAQPHWAFCYSMLHKVSRSFAFVIQQLHPELRNAVCIFYLVLRALDTVEDDTSIA 180
           A ++IP +PHWAFCY+MLHKVSRSFA VIQQL  ELRNAVCIFYLVLRALDTVEDDTSI 
Sbjct: 27  AEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGIELRNAVCIFYLVLRALDTVEDDTSIE 86

Query: 181 SDVKVPILEAFHRHIYDPNWHFACGTKEYKILMDELHHVVTAFLELGKGYQEAIEEITKR 360
           +DVKVPIL AFHRHIYD +WHF+CGTKEYK+LMD+ HHV TAFLELGK YQEAIE+ITKR
Sbjct: 87  TDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNYQEAIEDITKR 146

Query: 361 MGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGLSKLFYASNLEDLIPDSLSNSMGLYLQ 540
           MGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGLSKLF+AS  EDL PD LSNSMGL+LQ
Sbjct: 147 MGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGSEDLAPDDLSNSMGLFLQ 206

Query: 541 KTNIIRDYLEDINEIPKSRMFWPREIWSKYIDKLEDFKYEENSVQAVQCLNDMVTNALLH 720
           KTNIIRDYLEDINEIPKSRMFWPR+IWS+Y++KLED KYEENSV+AVQCLNDMVTNAL+H
Sbjct: 207 KTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKLEDLKYEENSVKAVQCLNDMVTNALMH 266

Query: 721 VEDCLKYMSALRDPSIFRFCAIPQIMAVGTLALCYNNIAIFRGVVKMRRGLTAKLIDGTR 900
            EDCLKYM+ALRDP IFRFCAIPQIMA+GTLALCYNNI +FRGVVKMRRGLTAK+ID T+
Sbjct: 267 PEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTK 326

Query: 901 S 903
           +
Sbjct: 327 T 327



 Score =  102 bits (253), Expect(2) = e-173
 Identities = 46/69 (66%), Positives = 63/69 (91%)
 Frame = +2

Query: 971  LIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATETLSRIEAIQQTCRESGLLNQRRSFI 1150
            +ID T++M+DVYGAF+DF+S+L+ KV+KNDPNAT+TLSR+EAIQ+TCRESGLL++R+S+I
Sbjct: 321  VIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRLEAIQKTCRESGLLSKRKSYI 380

Query: 1151 VGDQPRYSS 1177
            V D+  Y S
Sbjct: 381  VNDESGYGS 389


>gb|ACN69082.1| squalene synthase [Diospyros kaki]
          Length = 415

 Score =  537 bits (1384), Expect(2) = e-172
 Identities = 254/301 (84%), Positives = 283/301 (94%)
 Frame = +1

Query: 1   AAEEIPAQPHWAFCYSMLHKVSRSFAFVIQQLHPELRNAVCIFYLVLRALDTVEDDTSIA 180
           A ++IP +PHWAFCY+MLHKVSRSF  VIQQL  ELRNAVCIFYLVLRALDTVEDDTSIA
Sbjct: 27  AEKQIPPEPHWAFCYTMLHKVSRSFGLVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIA 86

Query: 181 SDVKVPILEAFHRHIYDPNWHFACGTKEYKILMDELHHVVTAFLELGKGYQEAIEEITKR 360
           ++VKVPIL AFH HIYD +WHF+CGT+EYK+LMDE HHV TAFLELGKGYQEAIE+IT R
Sbjct: 87  TEVKVPILLAFHHHIYDRDWHFSCGTREYKVLMDEFHHVSTAFLELGKGYQEAIEDITMR 146

Query: 361 MGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGLSKLFYASNLEDLIPDSLSNSMGLYLQ 540
           MGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGLSKLF+AS LEDL PDSLSNSMGL+LQ
Sbjct: 147 MGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGLEDLAPDSLSNSMGLFLQ 206

Query: 541 KTNIIRDYLEDINEIPKSRMFWPREIWSKYIDKLEDFKYEENSVQAVQCLNDMVTNALLH 720
           KTNIIRDYLEDINEIPKSRMFWPR+IWSKY++KLED KYE+NSV++VQCLNDMVTNAL+H
Sbjct: 207 KTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEKNSVKSVQCLNDMVTNALIH 266

Query: 721 VEDCLKYMSALRDPSIFRFCAIPQIMAVGTLALCYNNIAIFRGVVKMRRGLTAKLIDGTR 900
           V+DCLKYMSALRDP+IFRFCAIPQIMA+GTLALCYNNI +FRGVVKMRRGLTAK+ID T+
Sbjct: 267 VDDCLKYMSALRDPAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDQTK 326

Query: 901 S 903
           +
Sbjct: 327 T 327



 Score = 97.1 bits (240), Expect(2) = e-172
 Identities = 45/69 (65%), Positives = 62/69 (89%)
 Frame = +2

Query: 971  LIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATETLSRIEAIQQTCRESGLLNQRRSFI 1150
            +ID T+++SDVYGAF+DFS +LKSKVEKNDPN+T+TLSRIEAIQ+TCRESG L++R+S+I
Sbjct: 321  VIDQTKTISDVYGAFFDFSCMLKSKVEKNDPNSTKTLSRIEAIQKTCRESGTLSKRKSYI 380

Query: 1151 VGDQPRYSS 1177
            +  +  ++S
Sbjct: 381  LRSKRTHNS 389


>ref|XP_003537842.1| PREDICTED: squalene synthase-like [Glycine max]
          Length = 413

 Score =  533 bits (1374), Expect(2) = e-172
 Identities = 254/299 (84%), Positives = 277/299 (92%)
 Frame = +1

Query: 1   AAEEIPAQPHWAFCYSMLHKVSRSFAFVIQQLHPELRNAVCIFYLVLRALDTVEDDTSIA 180
           A ++IP +PHWAFCY+MLHKVSRSFA VIQQL  ELRNAVCIFYLVLRALDTVEDDTSI 
Sbjct: 27  AEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIE 86

Query: 181 SDVKVPILEAFHRHIYDPNWHFACGTKEYKILMDELHHVVTAFLELGKGYQEAIEEITKR 360
           +DVKVPIL AFHRHIYD +WHF+CGTKEYK+LMD+ HHV TAFLELGK YQEAIE+ITKR
Sbjct: 87  TDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNYQEAIEDITKR 146

Query: 361 MGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGLSKLFYASNLEDLIPDSLSNSMGLYLQ 540
           MGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGLSKLF+AS  EDL PD LSNSMGL+LQ
Sbjct: 147 MGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGSEDLAPDDLSNSMGLFLQ 206

Query: 541 KTNIIRDYLEDINEIPKSRMFWPREIWSKYIDKLEDFKYEENSVQAVQCLNDMVTNALLH 720
           KTNIIRDYLEDINEIPKSRMFWPR+IWSKY++KLED KYEENSV+AVQCLNDMVTNAL+H
Sbjct: 207 KTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSVKAVQCLNDMVTNALMH 266

Query: 721 VEDCLKYMSALRDPSIFRFCAIPQIMAVGTLALCYNNIAIFRGVVKMRRGLTAKLIDGT 897
            EDCL YM+ALRDP IFRFCAIPQIMA+GTLALCYNNI +FRGVVKMRRGLTAK+ID T
Sbjct: 267 AEDCLTYMAALRDPPIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRT 325



 Score =  100 bits (248), Expect(2) = e-172
 Identities = 46/69 (66%), Positives = 62/69 (89%)
 Frame = +2

Query: 971  LIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATETLSRIEAIQQTCRESGLLNQRRSFI 1150
            +ID T +M+DVYGAF+DF+S+L+SKV+KNDPNAT+ LSR+EAIQ+TCRESGLL++R+S+I
Sbjct: 321  VIDRTTTMADVYGAFFDFASMLESKVDKNDPNATKALSRLEAIQKTCRESGLLSKRKSYI 380

Query: 1151 VGDQPRYSS 1177
            V D+  Y S
Sbjct: 381  VKDESGYGS 389


>gb|AFI33135.2| squalene synthase, partial [Eriobotrya japonica]
          Length = 387

 Score =  537 bits (1384), Expect(2) = e-172
 Identities = 255/301 (84%), Positives = 282/301 (93%)
 Frame = +1

Query: 1   AAEEIPAQPHWAFCYSMLHKVSRSFAFVIQQLHPELRNAVCIFYLVLRALDTVEDDTSIA 180
           A ++IPA+PHWAFCY+ML KVSRSFA VIQQL  ELRNAVCIFYLVLRALDTVEDDTSIA
Sbjct: 2   AEKQIPAEPHWAFCYTMLQKVSRSFALVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIA 61

Query: 181 SDVKVPILEAFHRHIYDPNWHFACGTKEYKILMDELHHVVTAFLELGKGYQEAIEEITKR 360
           +DVKVPIL AFHRHIYDP WHFACGT  YK+LMDE HHV TAFLELGKGYQEAIE+ITKR
Sbjct: 62  TDVKVPILLAFHRHIYDPEWHFACGTNNYKVLMDEFHHVSTAFLELGKGYQEAIEDITKR 121

Query: 361 MGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGLSKLFYASNLEDLIPDSLSNSMGLYLQ 540
           MGAGMAKFI+KEVET+D+YDEYCHYVAGLVGLGLSKLF+A+  EDL  DSLSNSMGL+LQ
Sbjct: 122 MGAGMAKFIMKEVETIDDYDEYCHYVAGLVGLGLSKLFHAAGKEDLASDSLSNSMGLFLQ 181

Query: 541 KTNIIRDYLEDINEIPKSRMFWPREIWSKYIDKLEDFKYEENSVQAVQCLNDMVTNALLH 720
           KTNIIRDYLEDINEIPKSRMFWPR+IWSKY++KLED KYEENS +AVQCLNDMVTNAL+H
Sbjct: 182 KTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSEKAVQCLNDMVTNALIH 241

Query: 721 VEDCLKYMSALRDPSIFRFCAIPQIMAVGTLALCYNNIAIFRGVVKMRRGLTAKLIDGTR 900
           +EDCLKYM+ALRDP+IF+FCAIPQIMA+GTLALCYNNI +FRGVVKMRRGLTA++ID T+
Sbjct: 242 MEDCLKYMAALRDPAIFKFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAEVIDRTK 301

Query: 901 S 903
           S
Sbjct: 302 S 302



 Score = 95.9 bits (237), Expect(2) = e-172
 Identities = 43/69 (62%), Positives = 59/69 (85%)
 Frame = +2

Query: 971  LIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATETLSRIEAIQQTCRESGLLNQRRSFI 1150
            +ID T+SM DVYGAF+DFSSIL SKV+KNDPNAT++LSR+EA+Q+ CR+SG L++R+S+I
Sbjct: 296  VIDRTKSMDDVYGAFFDFSSILNSKVDKNDPNATKSLSRVEAVQKLCRDSGALSKRKSYI 355

Query: 1151 VGDQPRYSS 1177
               +  Y+S
Sbjct: 356  ANREQSYNS 364


>gb|ACU21003.1| unknown [Glycine max]
          Length = 413

 Score =  531 bits (1367), Expect(2) = e-172
 Identities = 253/301 (84%), Positives = 279/301 (92%)
 Frame = +1

Query: 1   AAEEIPAQPHWAFCYSMLHKVSRSFAFVIQQLHPELRNAVCIFYLVLRALDTVEDDTSIA 180
           A ++IP +PHWAF Y+MLHKVSRSFA VIQQL  ELRNAVCIFYLVLRALDTVEDDTSI 
Sbjct: 27  AEKQIPPEPHWAFRYTMLHKVSRSFALVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIE 86

Query: 181 SDVKVPILEAFHRHIYDPNWHFACGTKEYKILMDELHHVVTAFLELGKGYQEAIEEITKR 360
           +DVKVPIL AFHRHIYD +WHF+CGTKEYK+LMD+ HHV TAFLELGK YQEAIE+ITKR
Sbjct: 87  TDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQFHHVSTAFLELGKNYQEAIEDITKR 146

Query: 361 MGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGLSKLFYASNLEDLIPDSLSNSMGLYLQ 540
           MGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGLSKLF+AS  EDL PD LSNSMGL+LQ
Sbjct: 147 MGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGSEDLAPDDLSNSMGLFLQ 206

Query: 541 KTNIIRDYLEDINEIPKSRMFWPREIWSKYIDKLEDFKYEENSVQAVQCLNDMVTNALLH 720
           KTNIIRDYLEDINEIPKSRMFWPR+IWS+Y++KLED KYEENSV+AVQCLNDMVTNAL+H
Sbjct: 207 KTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKLEDLKYEENSVKAVQCLNDMVTNALMH 266

Query: 721 VEDCLKYMSALRDPSIFRFCAIPQIMAVGTLALCYNNIAIFRGVVKMRRGLTAKLIDGTR 900
            EDCLKYM+ALRDP IFRFCAIPQIMA+GTLALCYNNI +FRGVVKMRRGLTAK+ID T+
Sbjct: 267 AEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKVIDRTK 326

Query: 901 S 903
           +
Sbjct: 327 T 327



 Score =  102 bits (253), Expect(2) = e-172
 Identities = 46/69 (66%), Positives = 63/69 (91%)
 Frame = +2

Query: 971  LIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATETLSRIEAIQQTCRESGLLNQRRSFI 1150
            +ID T++M+DVYGAF+DF+S+L+ KV+KNDPNAT+TLSR+EAIQ+TCRESGLL++R+S+I
Sbjct: 321  VIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRLEAIQKTCRESGLLSKRKSYI 380

Query: 1151 VGDQPRYSS 1177
            V D+  Y S
Sbjct: 381  VNDESGYGS 389


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