BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001048
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44172.1| unknown [Medicago truncatula]                          156   8e-36
ref|NP_001060543.1| Os07g0662500 [Oryza sativa Japonica Group] g...   155   2e-35
gb|ABK96255.1| unknown [Populus trichocarpa x Populus deltoides]      155   2e-35
gb|ABK94326.1| unknown [Populus trichocarpa]                          155   2e-35
tpg|DAA64011.1| TPA: elongation factor 1-beta [Zea mays]              154   4e-35

>gb|AFK44172.1| unknown [Medicago truncatula]
          Length = 231

 Score =  156 bits (395), Expect = 8e-36
 Identities = 74/86 (86%), Positives = 81/86 (94%)
 Frame = -1

Query: 550 LLDVKPWDDETDMKKLEGAVRSVEMEGLTWGASKLAPVGYGIKKLQIMLTIVDDLVSIDN 371
           LLDVKPWDDETDMKKLE AVRSV+MEGL WGASKL PVGYGIKKLQIMLTIVDDLVS+D+
Sbjct: 146 LLDVKPWDDETDMKKLEEAVRSVQMEGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDD 205

Query: 370 LIEDRLTSEPANEYIQSCDIAAFNKI 293
           ++EDRLT+EP NEY+QSCDI AFNKI
Sbjct: 206 MVEDRLTAEPINEYVQSCDIVAFNKI 231



 Score =  110 bits (276), Expect = 5e-22
 Identities = 56/105 (53%), Positives = 69/105 (65%)
 Frame = -3

Query: 1067 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 888
            MA TF+N+ +  GLK+LD+YLL RSYITGYQASKDD+TVY A+ S PS EY NV+RW+ H
Sbjct: 1    MAVTFYNLKAESGLKKLDEYLLSRSYITGYQASKDDITVYSALPSVPSYEYGNVARWYKH 60

Query: 887  IDALLRIXXXXXXXXXXXXXGFPPIDDKVATPATTDSKAVVDEDE 753
            IDALLRI                  +D VATP  +D+KA   E +
Sbjct: 61   IDALLRISGVSGEGSGVTVESSLVAEDAVATPPVSDTKAAEAEGD 105


>ref|NP_001060543.1| Os07g0662500 [Oryza sativa Japonica Group]
           gi|90110019|sp|P29545.3|EF1B_ORYSJ RecName:
           Full=Elongation factor 1-beta; Short=EF-1-beta; AltName:
           Full=Elongation factor 1-beta'; Short=EF-1-beta';
           AltName: Full=Elongation factor 1B-alpha 2; AltName:
           Full=eEF-1B alpha 2 gi|38175744|dbj|BAC22427.2| putative
           translation elongation factor eEF-1 beta' chain [Oryza
           sativa Japonica Group] gi|113612079|dbj|BAF22457.1|
           Os07g0662500 [Oryza sativa Japonica Group]
           gi|125559496|gb|EAZ05032.1| hypothetical protein
           OsI_27215 [Oryza sativa Indica Group]
           gi|149391281|gb|ABR25658.1| elongation factor beta-1
           [Oryza sativa Indica Group] gi|215692676|dbj|BAG88096.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|215704364|dbj|BAG93798.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215768499|dbj|BAH00728.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 224

 Score =  155 bits (391), Expect = 2e-35
 Identities = 74/86 (86%), Positives = 80/86 (93%)
 Frame = -1

Query: 550 LLDVKPWDDETDMKKLEGAVRSVEMEGLTWGASKLAPVGYGIKKLQIMLTIVDDLVSIDN 371
           LLDVKPWDDETDMKKLE AVRSV+MEGLTWGASKL PVGYGIKKLQIMLTIVDDLVS+D+
Sbjct: 139 LLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDS 198

Query: 370 LIEDRLTSEPANEYIQSCDIAAFNKI 293
           LIE+ LT EP NE++QSCDI AFNKI
Sbjct: 199 LIEEHLTEEPINEFVQSCDIVAFNKI 224



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 26/65 (40%), Positives = 44/65 (67%)
 Frame = -3

Query: 1067 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 888
            MA TF ++++A GLK L+ +L  ++Y++G   SKDD+ V+ A+ S P +E+ N +RW+  
Sbjct: 1    MAVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDT 60

Query: 887  IDALL 873
            + A L
Sbjct: 61   VAAAL 65


>gb|ABK96255.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 230

 Score =  155 bits (391), Expect = 2e-35
 Identities = 75/86 (87%), Positives = 79/86 (91%)
 Frame = -1

Query: 550 LLDVKPWDDETDMKKLEGAVRSVEMEGLTWGASKLAPVGYGIKKLQIMLTIVDDLVSIDN 371
           LLDVKPWDDETDMKKLE AVRSVEMEGL WGASKL PVGYGIKKL IMLTIVDDLVS+D 
Sbjct: 145 LLDVKPWDDETDMKKLEEAVRSVEMEGLLWGASKLVPVGYGIKKLTIMLTIVDDLVSVDT 204

Query: 370 LIEDRLTSEPANEYIQSCDIAAFNKI 293
           LIE+RLT+EP NEY+QSCDI AFNKI
Sbjct: 205 LIEERLTTEPINEYVQSCDIVAFNKI 230



 Score =  114 bits (284), Expect = 6e-23
 Identities = 57/106 (53%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
 Frame = -3

Query: 1067 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 888
            MA TF+++ SA GLK+LDD+LL RSYI+GYQASKDD+ VY A+SS PS+E+VNV RW+ H
Sbjct: 1    MAVTFYDLTSAAGLKKLDDFLLSRSYISGYQASKDDLAVYSALSSAPSAEHVNVYRWYTH 60

Query: 887  IDALLRIXXXXXXXXXXXXXGFPPI-DDKVATPATTDSKAVVDEDE 753
            IDALLRI             G  PI ++ +ATP + ++KA  D+D+
Sbjct: 61   IDALLRISGVEAEGCGVVVKGSAPITEEAIATPPSAETKAAEDDDD 106


>gb|ABK94326.1| unknown [Populus trichocarpa]
          Length = 230

 Score =  155 bits (391), Expect = 2e-35
 Identities = 75/86 (87%), Positives = 79/86 (91%)
 Frame = -1

Query: 550 LLDVKPWDDETDMKKLEGAVRSVEMEGLTWGASKLAPVGYGIKKLQIMLTIVDDLVSIDN 371
           LLDVKPWDDETDMKKLE AVRSVEMEGL WGASKL PVGYGIKKL IMLTIVDDLVS+D 
Sbjct: 145 LLDVKPWDDETDMKKLEEAVRSVEMEGLLWGASKLVPVGYGIKKLTIMLTIVDDLVSVDT 204

Query: 370 LIEDRLTSEPANEYIQSCDIAAFNKI 293
           LIE+RLT+EP NEY+QSCDI AFNKI
Sbjct: 205 LIEERLTTEPINEYVQSCDIVAFNKI 230



 Score =  115 bits (289), Expect = 2e-23
 Identities = 58/106 (54%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = -3

Query: 1067 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 888
            MA TF+++ SA GLK+LDD+LL RSYI+GYQASKDD+TVY A+SS PS+E+VNV RW+ H
Sbjct: 1    MAVTFYDLTSAAGLKKLDDFLLSRSYISGYQASKDDLTVYSALSSAPSAEHVNVYRWYTH 60

Query: 887  IDALLRIXXXXXXXXXXXXXGFPPI-DDKVATPATTDSKAVVDEDE 753
            IDALLRI             G  PI ++ +ATP + ++KA  D+D+
Sbjct: 61   IDALLRISGVEAEGCGVVVKGSAPITEEAIATPPSAETKAAEDDDD 106


>tpg|DAA64011.1| TPA: elongation factor 1-beta [Zea mays]
          Length = 286

 Score =  154 bits (389), Expect = 4e-35
 Identities = 74/86 (86%), Positives = 78/86 (90%)
 Frame = -1

Query: 550 LLDVKPWDDETDMKKLEGAVRSVEMEGLTWGASKLAPVGYGIKKLQIMLTIVDDLVSIDN 371
           L+DVKPWDDETDMKKLE AVRSV+MEGLTWGASKL PVGYGIKK+ IMLTIVDDLVSID 
Sbjct: 201 LMDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKMTIMLTIVDDLVSIDT 260

Query: 370 LIEDRLTSEPANEYIQSCDIAAFNKI 293
           LIED LT EP NEY+QSCDI AFNKI
Sbjct: 261 LIEDHLTQEPINEYVQSCDIVAFNKI 286