BLASTX nr result

ID: Coptis24_contig00001043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001043
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545854.1| PREDICTED: transmembrane protein 184A-like [...    60   3e-07
ref|XP_003543084.1| PREDICTED: transmembrane protein 184A-like [...    60   3e-07
gb|ACU19469.1| unknown [Glycine max]                                   59   4e-07
emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]    58   8e-07
gb|AAZ32885.1| unknown [Medicago sativa]                               57   2e-06

>ref|XP_003545854.1| PREDICTED: transmembrane protein 184A-like [Glycine max]
          Length = 296

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   NILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLKSEKKNE 117
           NILVC+EMVIFS++Q+YAY  APYSG V+  LK  KKNE
Sbjct: 258 NILVCLEMVIFSVLQQYAYHPAPYSGEVEKMLKQNKKNE 296


>ref|XP_003543084.1| PREDICTED: transmembrane protein 184A-like [Glycine max]
          Length = 296

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   NILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLKSEKKNE 117
           NILVC+EMVIFS++Q+YAY  APYSG V+  LK  KKNE
Sbjct: 258 NILVCLEMVIFSVLQQYAYHPAPYSGEVEKMLKQNKKNE 296


>gb|ACU19469.1| unknown [Glycine max]
          Length = 314

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   NILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLKSEKKNE 117
           NILVC+EMVIFS+ Q+YAY  APYSG V+  LK  KKNE
Sbjct: 258 NILVCLEMVIFSVFQQYAYHPAPYSGEVEKMLKQNKKNE 296


>emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]
          Length = 295

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 24/39 (61%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   NILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLKSEKKNE 117
           N+LVC+EMV+FS++Q+YAY  APYSG ++ KLK  KK E
Sbjct: 257 NVLVCVEMVVFSVLQQYAYHVAPYSGDMEAKLKLSKKRE 295


>gb|AAZ32885.1| unknown [Medicago sativa]
          Length = 197

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   NILVCIEMVIFSIIQRYAYSAAPYSGGVKPKLK-SEKKNE 117
           NILVCIEMV+FS++Q+YAY A+PYSG V+  LK + KKNE
Sbjct: 158 NILVCIEMVVFSVLQQYAYHASPYSGEVEKMLKPNNKKNE 197


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