BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001038
         (1583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279592.2| PREDICTED: GPN-loop GTPase 1 homolog [Vitis ...   469   e-130
emb|CBI22859.3| unnamed protein product [Vitis vinifera]              469   e-130
emb|CAN71805.1| hypothetical protein VITISV_029075 [Vitis vinifera]   469   e-130
ref|XP_004152812.1| PREDICTED: GPN-loop GTPase 1 homolog [Cucumi...   452   e-124
ref|NP_001049925.1| Os03g0312600 [Oryza sativa Japonica Group] g...   447   e-123

>ref|XP_002279592.2| PREDICTED: GPN-loop GTPase 1 homolog [Vitis vinifera]
          Length = 435

 Score =  469 bits (1207), Expect = e-130
 Identities = 250/365 (68%), Positives = 279/365 (76%), Gaps = 12/365 (3%)
 Frame = -2

Query: 1444 MDIDPDTYNSTVKEP---VVMQMDLPESSNTQSKDKEGDLATSMENLQMGEASK------ 1292
            MDID D  N  +K P     MQMD  ES++ + K+KE D++ S+E L + E+S       
Sbjct: 1    MDIDSDFRNLNLKSPEDDAPMQMDAAESAHIKGKEKE-DISESLEKLHIEESSSGSAGSS 59

Query: 1291 ---FXXXXXXXXXVGMAGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIR 1121
               F         VGMAG GKTTFLHRLVCHTQASNIRGYV+NLDPAV+TLPFG+NIDIR
Sbjct: 60   SISFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDIR 119

Query: 1120 DTVRYKEVMKEFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFT 941
            DTVRYKEVMK+FNLGPNGGILTSLNLFATKFDEV+S+IEKRADQLDYVLVDTPGQIEIFT
Sbjct: 120  DTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIFT 179

Query: 940  WSASGSIITEAFASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKT 761
            WSASG+IITEAFASTFPTV+ YVVDTPRSASPVTFMSNMLYACSILYKTRLP++L FNK 
Sbjct: 180  WSASGAIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKV 239

Query: 760  DVAQHQFALEWMEDFEVFHAALEXXXXXXXXXXXXXXLVLDEFYKNLHXXXXXXXXXXGM 581
            DVAQHQFALEWMEDFEVFHAAL+              LVLDEFYKNL           GM
Sbjct: 240  DVAQHQFALEWMEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAGM 299

Query: 580  DAFFKAIESSSDEYMETYKADLDXXXXXXXXXXXXXXXENMEKLRKDMEKSNGETVVLST 401
            + FFKAIE+S++EYM +YKADLD               ENM++LRKDMEKS GET+VLST
Sbjct: 300  EEFFKAIEASAEEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLST 359

Query: 400  GLKDK 386
            GLKDK
Sbjct: 360  GLKDK 364


>emb|CBI22859.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  469 bits (1207), Expect = e-130
 Identities = 250/365 (68%), Positives = 279/365 (76%), Gaps = 12/365 (3%)
 Frame = -2

Query: 1444 MDIDPDTYNSTVKEP---VVMQMDLPESSNTQSKDKEGDLATSMENLQMGEASK------ 1292
            MDID D  N  +K P     MQMD  ES++ + K+KE D++ S+E L + E+S       
Sbjct: 1    MDIDSDFRNLNLKSPEDDAPMQMDAAESAHIKGKEKE-DISESLEKLHIEESSSGSAGSS 59

Query: 1291 ---FXXXXXXXXXVGMAGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIR 1121
               F         VGMAG GKTTFLHRLVCHTQASNIRGYV+NLDPAV+TLPFG+NIDIR
Sbjct: 60   SISFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDIR 119

Query: 1120 DTVRYKEVMKEFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFT 941
            DTVRYKEVMK+FNLGPNGGILTSLNLFATKFDEV+S+IEKRADQLDYVLVDTPGQIEIFT
Sbjct: 120  DTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIFT 179

Query: 940  WSASGSIITEAFASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKT 761
            WSASG+IITEAFASTFPTV+ YVVDTPRSASPVTFMSNMLYACSILYKTRLP++L FNK 
Sbjct: 180  WSASGAIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKV 239

Query: 760  DVAQHQFALEWMEDFEVFHAALEXXXXXXXXXXXXXXLVLDEFYKNLHXXXXXXXXXXGM 581
            DVAQHQFALEWMEDFEVFHAAL+              LVLDEFYKNL           GM
Sbjct: 240  DVAQHQFALEWMEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAGM 299

Query: 580  DAFFKAIESSSDEYMETYKADLDXXXXXXXXXXXXXXXENMEKLRKDMEKSNGETVVLST 401
            + FFKAIE+S++EYM +YKADLD               ENM++LRKDMEKS GET+VLST
Sbjct: 300  EEFFKAIEASAEEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLST 359

Query: 400  GLKDK 386
            GLKDK
Sbjct: 360  GLKDK 364


>emb|CAN71805.1| hypothetical protein VITISV_029075 [Vitis vinifera]
          Length = 414

 Score =  469 bits (1207), Expect = e-130
 Identities = 250/365 (68%), Positives = 279/365 (76%), Gaps = 12/365 (3%)
 Frame = -2

Query: 1444 MDIDPDTYNSTVKEP---VVMQMDLPESSNTQSKDKEGDLATSMENLQMGEASK------ 1292
            MDID D  N  +K P     MQMD  ES++ + K+KE D++ S+E L + E+S       
Sbjct: 1    MDIDSDFRNLNLKSPEDDAPMQMDAAESAHIKGKEKE-DISESLEKLHIEESSSGSAGSS 59

Query: 1291 ---FXXXXXXXXXVGMAGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIR 1121
               F         VGMAG GKTTFLHRLVCHTQASNIRGYV+NLDPAV+TLPFG+NIDIR
Sbjct: 60   SISFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDIR 119

Query: 1120 DTVRYKEVMKEFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFT 941
            DTVRYKEVMK+FNLGPNGGILTSLNLFATKFDEV+S+IEKRADQLDYVLVDTPGQIEIFT
Sbjct: 120  DTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIFT 179

Query: 940  WSASGSIITEAFASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKT 761
            WSASG+IITEAFASTFPTV+ YVVDTPRSASPVTFMSNMLYACSILYKTRLP++L FNK 
Sbjct: 180  WSASGAIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKV 239

Query: 760  DVAQHQFALEWMEDFEVFHAALEXXXXXXXXXXXXXXLVLDEFYKNLHXXXXXXXXXXGM 581
            DVAQHQFALEWMEDFEVFHAAL+              LVLDEFYKNL           GM
Sbjct: 240  DVAQHQFALEWMEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAGM 299

Query: 580  DAFFKAIESSSDEYMETYKADLDXXXXXXXXXXXXXXXENMEKLRKDMEKSNGETVVLST 401
            + FFKAIE+S++EYM +YKADLD               ENM++LRKDMEKS GET+VLST
Sbjct: 300  EEFFKAIEASAEEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLST 359

Query: 400  GLKDK 386
            GLKDK
Sbjct: 360  GLKDK 364


>ref|XP_004152812.1| PREDICTED: GPN-loop GTPase 1 homolog [Cucumis sativus]
            gi|449525563|ref|XP_004169786.1| PREDICTED: GPN-loop
            GTPase 1 homolog [Cucumis sativus]
          Length = 410

 Score =  452 bits (1162), Expect = e-124
 Identities = 242/360 (67%), Positives = 272/360 (75%), Gaps = 8/360 (2%)
 Frame = -2

Query: 1444 MDIDPDTYNSTVKEPVVMQMDLPESSNTQSKDKEGDLATSMENLQMGEASK--------F 1289
            MD+D D  +    +     M+  E SN + K KE +LA S++NL + E+S+        F
Sbjct: 1    MDVDSDASHKPTDDAECRPME-SEDSNDKGKAKE-ELADSIKNLNIEESSRHAGSLATNF 58

Query: 1288 XXXXXXXXXVGMAGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIRDTVR 1109
                     +GMAG GKTTFLHRLVCHT ASNIRGYV+NLDPAVMTLPFG+NIDIRDTVR
Sbjct: 59   RRKPVIIIVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTVR 118

Query: 1108 YKEVMKEFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSAS 929
            YKEVMK+FNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSAS
Sbjct: 119  YKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSAS 178

Query: 928  GSIITEAFASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKTDVAQ 749
            G+IITEAFASTFPTV+AYVVDTPRS++PVTFMSNMLYACSILYKTRLP++L FNKTDVA+
Sbjct: 179  GAIITEAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDVAK 238

Query: 748  HQFALEWMEDFEVFHAALEXXXXXXXXXXXXXXLVLDEFYKNLHXXXXXXXXXXGMDAFF 569
            H+FALEWMEDFE F AA+               LVLDEFYKNL           GMD+FF
Sbjct: 239  HEFALEWMEDFEAFQAAVSSDSSYTSTLSQSLSLVLDEFYKNLKSVGVSAVSGAGMDSFF 298

Query: 568  KAIESSSDEYMETYKADLDXXXXXXXXXXXXXXXENMEKLRKDMEKSNGETVVLSTGLKD 389
            KAIESS++EYME YKA+LD               ENMEKLR+DME S G+TVVLSTGLKD
Sbjct: 299  KAIESSAEEYMENYKAELDKRVAEKQRLEEERRRENMEKLRRDMESSKGQTVVLSTGLKD 358


>ref|NP_001049925.1| Os03g0312600 [Oryza sativa Japonica Group]
            gi|108707797|gb|ABF95592.1| XPA-binding protein 1,
            putative, expressed [Oryza sativa Japonica Group]
            gi|108707798|gb|ABF95593.1| XPA-binding protein 1,
            putative, expressed [Oryza sativa Japonica Group]
            gi|108707799|gb|ABF95594.1| XPA-binding protein 1,
            putative, expressed [Oryza sativa Japonica Group]
            gi|113548396|dbj|BAF11839.1| Os03g0312600 [Oryza sativa
            Japonica Group] gi|215706974|dbj|BAG93434.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 396

 Score =  447 bits (1151), Expect = e-123
 Identities = 238/360 (66%), Positives = 273/360 (75%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1444 MDIDPDTYNSTVKEPVVMQMDLPESSNTQSKDKEGDLATSMENLQMG-EASKFXXXXXXX 1268
            MD+D D   +   +P   QMDL + ++ + K K  +LA S+ +L +G E + F       
Sbjct: 1    MDVDSDP--AAAGKPT--QMDLEDQTDAKGKGKSEELADSIGSLSIGPERTNFKKKPVII 56

Query: 1267 XXVGMAGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIRDTVRYKEVMKE 1088
              +GMAG GKTTF+HRLVCHTQASN+RGYV+NLDPAVMTLPFG+NIDIRDTVRYKEVMKE
Sbjct: 57   IVIGMAGTGKTTFMHRLVCHTQASNMRGYVLNLDPAVMTLPFGANIDIRDTVRYKEVMKE 116

Query: 1087 FNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGSIITEA 908
            + LGPNGGILTSLNLF+TKFDEVISVIE+RADQLDYVLVDTPGQIEIFTWSASG+IITEA
Sbjct: 117  YGLGPNGGILTSLNLFSTKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEA 176

Query: 907  FASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKTDVAQHQFALEW 728
            FASTFPTVVAYVVDTPRS SPVTFMSNMLYACSILYKTRLPMILTFNK DVA+H+FALEW
Sbjct: 177  FASTFPTVVAYVVDTPRSTSPVTFMSNMLYACSILYKTRLPMILTFNKVDVAKHEFALEW 236

Query: 727  MEDFEVFHAALEXXXXXXXXXXXXXXLVLDEFYKNLHXXXXXXXXXXGMDAFFKAIESSS 548
            MEDFE F  AL+              LVLDEFYKNL           G+++FF+AIE+S+
Sbjct: 237  MEDFEAFQTALDSDSSYSSTFTRSLSLVLDEFYKNLRSVGVSAVSGAGVNSFFEAIEASA 296

Query: 547  DEYMETYKADLDXXXXXXXXXXXXXXXENMEKLRKDMEKSNGETVVLSTGLKDKEVITMM 368
             EYME Y+ADLD               ENME+L++DME S G+TVVLSTGLKDK   T M
Sbjct: 297  KEYMENYRADLDKRIAEKERLEAERRKENMERLQRDMENSKGQTVVLSTGLKDKNRATDM 356