BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001035
         (2511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2...   141   7e-31
ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2...   140   2e-30
ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|2...   139   5e-30
ref|NP_974770.1| RAB geranylgeranyl transferase beta subunit 1 [...   138   8e-30
ref|NP_568259.1| RAB geranylgeranyl transferase beta subunit 1 [...   138   8e-30

>ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
            vinifera] gi|147860391|emb|CAN82570.1| hypothetical
            protein VITISV_016117 [Vitis vinifera]
            gi|296090220|emb|CBI40039.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  141 bits (356), Expect = 7e-31
 Identities = 66/79 (83%), Positives = 73/79 (92%)
 Frame = -3

Query: 2203 LILIDRVHWIDKGKVAKFILDSQDKDNGGISDRPDDAVDVYHTYFGVAGLSLLEYSGLKA 2024
            LI+IDR HWIDK K+ KFILD QDK+NGGISDRPDDAVDV+HTYFGVAGL+ LEY GLKA
Sbjct: 239  LIMIDRAHWIDKEKLIKFILDCQDKENGGISDRPDDAVDVFHTYFGVAGLAHLEYPGLKA 298

Query: 2023 IDPAYSLPVDVVNRIFFSR 1967
            +DPAY+LPVDVVNRIFFSR
Sbjct: 299  VDPAYALPVDVVNRIFFSR 317



 Score =  115 bits (287), Expect = 7e-23
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = -1

Query: 2511 CQNLDGGFGCTPGGESHAGQIFCCVGALAITGSLHYIDKDLLGWWLCERQVQSGGL 2344
            C+NLDGGFGCTPG ESHAGQIFCCV ALA+TGSLH++DKDLLGWWLCERQV+SG L
Sbjct: 164  CKNLDGGFGCTPGAESHAGQIFCCVSALALTGSLHHVDKDLLGWWLCERQVKSGAL 219


>ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
            vinifera] gi|147821440|emb|CAN74579.1| hypothetical
            protein VITISV_024797 [Vitis vinifera]
            gi|296081232|emb|CBI17976.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  140 bits (352), Expect = 2e-30
 Identities = 64/79 (81%), Positives = 73/79 (92%)
 Frame = -3

Query: 2203 LILIDRVHWIDKGKVAKFILDSQDKDNGGISDRPDDAVDVYHTYFGVAGLSLLEYSGLKA 2024
            LI+IDR HWIDK K+ KFI+D QD++NGGISDRPDDAVDV+HTYFGVAGLSLLEY G+KA
Sbjct: 239  LIMIDRAHWIDKDKLIKFIIDCQDRENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGVKA 298

Query: 2023 IDPAYSLPVDVVNRIFFSR 1967
            +DPAY+LPV VVNRIFFSR
Sbjct: 299  VDPAYALPVHVVNRIFFSR 317



 Score =  119 bits (299), Expect = 3e-24
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -1

Query: 2511 CQNLDGGFGCTPGGESHAGQIFCCVGALAITGSLHYIDKDLLGWWLCERQVQSGGL 2344
            C+NLDGGFGCTPG ESHAGQIFCCVGALA+TGSLH++DKDLLGWWLCERQV+SGGL
Sbjct: 164  CKNLDGGFGCTPGAESHAGQIFCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGL 219


>ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|222857877|gb|EEE95424.1|
            predicted protein [Populus trichocarpa]
          Length = 313

 Score =  139 bits (349), Expect = 5e-30
 Identities = 65/79 (82%), Positives = 73/79 (92%)
 Frame = -3

Query: 2203 LILIDRVHWIDKGKVAKFILDSQDKDNGGISDRPDDAVDVYHTYFGVAGLSLLEYSGLKA 2024
            LI+IDRVHWI+K K+ KFIL+ QD +NGGISDRPDDAVDVYHTYFGVAGLSLLEY GLKA
Sbjct: 235  LIMIDRVHWINKDKLVKFILNCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKA 294

Query: 2023 IDPAYSLPVDVVNRIFFSR 1967
            IDPA++LPVDVVNRIFF +
Sbjct: 295  IDPAHALPVDVVNRIFFQK 313



 Score =  121 bits (304), Expect = 8e-25
 Identities = 51/56 (91%), Positives = 56/56 (100%)
 Frame = -1

Query: 2511 CQNLDGGFGCTPGGESHAGQIFCCVGALAITGSLHYIDKDLLGWWLCERQVQSGGL 2344
            C+N+DGGFGCTPGGESHAGQIFCCVGALAITGSLH++DKDLLGWWLCERQV+SGGL
Sbjct: 160  CKNVDGGFGCTPGGESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGL 215


>ref|NP_974770.1| RAB geranylgeranyl transferase beta subunit 1 [Arabidopsis thaliana]
            gi|332004392|gb|AED91775.1| RAB geranylgeranyl
            transferase beta subunit 1 [Arabidopsis thaliana]
          Length = 320

 Score =  138 bits (347), Expect = 8e-30
 Identities = 63/79 (79%), Positives = 72/79 (91%)
 Frame = -3

Query: 2203 LILIDRVHWIDKGKVAKFILDSQDKDNGGISDRPDDAVDVYHTYFGVAGLSLLEYSGLKA 2024
            LI+IDRVHWIDK K+ KFILD QD DNGGISDRP+DAVD++HTYFGVAGLSLLEY G+K 
Sbjct: 242  LIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGVKV 301

Query: 2023 IDPAYSLPVDVVNRIFFSR 1967
            IDPAY+LPVDVVNRI F++
Sbjct: 302  IDPAYALPVDVVNRIIFTK 320



 Score =  115 bits (289), Expect = 4e-23
 Identities = 48/56 (85%), Positives = 54/56 (96%)
 Frame = -1

Query: 2511 CQNLDGGFGCTPGGESHAGQIFCCVGALAITGSLHYIDKDLLGWWLCERQVQSGGL 2344
            C+NLDGGFGCTPG ESHAGQIFCCVGALAITGSLH++DKD LGWWLCERQ+++GGL
Sbjct: 167  CKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGL 222


>ref|NP_568259.1| RAB geranylgeranyl transferase beta subunit 1 [Arabidopsis thaliana]
            gi|28466947|gb|AAO44082.1| At5g12210 [Arabidopsis
            thaliana] gi|28466951|gb|AAO44084.1| At4g26580
            [Arabidopsis thaliana] gi|110743899|dbj|BAE99784.1| Rab
            geranylgeranyltransferase, beta subunit [Arabidopsis
            thaliana] gi|332004391|gb|AED91774.1| RAB geranylgeranyl
            transferase beta subunit 1 [Arabidopsis thaliana]
          Length = 321

 Score =  138 bits (347), Expect = 8e-30
 Identities = 63/79 (79%), Positives = 72/79 (91%)
 Frame = -3

Query: 2203 LILIDRVHWIDKGKVAKFILDSQDKDNGGISDRPDDAVDVYHTYFGVAGLSLLEYSGLKA 2024
            LI+IDRVHWIDK K+ KFILD QD DNGGISDRP+DAVD++HTYFGVAGLSLLEY G+K 
Sbjct: 243  LIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGVKV 302

Query: 2023 IDPAYSLPVDVVNRIFFSR 1967
            IDPAY+LPVDVVNRI F++
Sbjct: 303  IDPAYALPVDVVNRIIFTK 321



 Score =  115 bits (289), Expect = 4e-23
 Identities = 48/56 (85%), Positives = 54/56 (96%)
 Frame = -1

Query: 2511 CQNLDGGFGCTPGGESHAGQIFCCVGALAITGSLHYIDKDLLGWWLCERQVQSGGL 2344
            C+NLDGGFGCTPG ESHAGQIFCCVGALAITGSLH++DKD LGWWLCERQ+++GGL
Sbjct: 168  CKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGL 223