BLASTX nr result
ID: Coptis24_contig00001024
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00001024 (2021 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632757.1| PREDICTED: auxin-repressed 12.5 kDa protein-... 100 2e-18 ref|XP_003528661.1| PREDICTED: uncharacterized protein LOC100820... 80 2e-12 ref|XP_002304241.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-10 gb|ACG37064.1| auxin-repressed protein [Zea mays] gi|414870259|t... 69 4e-09 ref|NP_001150341.1| LOC100283971 [Zea mays] gi|195638550|gb|ACG3... 69 5e-09 >ref|XP_003632757.1| PREDICTED: auxin-repressed 12.5 kDa protein-like [Vitis vinifera] gi|297742955|emb|CBI35822.3| unnamed protein product [Vitis vinifera] Length = 126 Score = 99.8 bits (247), Expect = 2e-18 Identities = 59/129 (45%), Positives = 73/129 (56%) Frame = -3 Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSLPAAKGIMVPISEDVPISRSITIVKPVINT 1681 MG LD WD+T+AGP PE G GK LRK+ SL AA+ + ++V ++RSITI+K Sbjct: 1 MGFLDKLWDETVAGPPPETGLGK-LRKYKSLSAARSPPIINPDEVQVTRSITILK---TN 56 Query: 1680 NNLRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERAEPRSPTVY 1501 ++ RNF D K +RRK EAFERAEPRSPTVY Sbjct: 57 SSFRNFSPDSVSVPNSPAGSSAPESPFTPGTPTGDYKTDARRKAALEAFERAEPRSPTVY 116 Query: 1500 DWVVISALD 1474 DW+VISALD Sbjct: 117 DWIVISALD 125 >ref|XP_003528661.1| PREDICTED: uncharacterized protein LOC100820058 isoform 2 [Glycine max] Length = 122 Score = 80.1 bits (196), Expect = 2e-12 Identities = 51/129 (39%), Positives = 64/129 (49%) Frame = -3 Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSLPAAKGIMVPISEDVPISRSITIVKPVINT 1681 MG L WD+T+AGP PE G G KLRK++S + ++E VPISRSITIV+ Sbjct: 3 MGFLHKLWDETLAGPAPETGLG-KLRKYNSFSGGSSVRSTVAEHVPISRSITIVRSQSGF 61 Query: 1680 NNLRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERAEPRSPTVY 1501 D K+L+RRK S E AE RSPT+Y Sbjct: 62 GTTTT--------TSAPSAPTTPRTPLTPEAPGGDFKKLTRRK--SSTVESAENRSPTIY 111 Query: 1500 DWVVISALD 1474 DWV++SALD Sbjct: 112 DWVIMSALD 120 >ref|XP_002304241.1| predicted protein [Populus trichocarpa] gi|222841673|gb|EEE79220.1| predicted protein [Populus trichocarpa] Length = 136 Score = 74.3 bits (181), Expect = 1e-10 Identities = 51/137 (37%), Positives = 66/137 (48%), Gaps = 8/137 (5%) Frame = -3 Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL-----PAAKGIMVPISEDVPISRSITIVK 1696 MG L WD+T+AGP P+ G G KLRK+DS P ED+ I+RSITIV+ Sbjct: 1 MGFLHKLWDETLAGPMPDSGLG-KLRKYDSFSVRSSPPVDAAAANSIEDMNITRSITIVR 59 Query: 1695 PVINTNNLRNF---XXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERA 1525 ++ LRN D +R+ RK+ EA E Sbjct: 60 -TNSSKYLRNISVDPCSSPVSPATPSTPTTPLTPGITGTPRGDFRRIKARKSSDEALESG 118 Query: 1524 EPRSPTVYDWVVISALD 1474 EPRS T+YDW+VI+ALD Sbjct: 119 EPRSLTIYDWIVINALD 135 >gb|ACG37064.1| auxin-repressed protein [Zea mays] gi|414870259|tpg|DAA48816.1| TPA: auxin-repressed protein [Zea mays] Length = 131 Score = 69.3 bits (168), Expect = 4e-09 Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 6/135 (4%) Frame = -3 Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL----PAAKGIMVPISEDVP-ISRSITIVK 1696 MGLLD WD+T+AGP+P+ G G KLRK+ S ++ I+ P P ++RSITI + Sbjct: 1 MGLLDQLWDETVAGPRPDSGLG-KLRKYSSFSPSSSSSSSILAPAPAPAPAVTRSITIAR 59 Query: 1695 PVINTNNLRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERA-EP 1519 P +L +R R+ +S+ E A P Sbjct: 60 P----PSLSVESYSSSSVPSSPASTPDSPLAAATPPKADVWRRFRRKTKVSDGPEPAVGP 115 Query: 1518 RSPTVYDWVVISALD 1474 RSPTVYDWVVIS+LD Sbjct: 116 RSPTVYDWVVISSLD 130 >ref|NP_001150341.1| LOC100283971 [Zea mays] gi|195638550|gb|ACG38743.1| auxin-repressed protein [Zea mays] Length = 132 Score = 68.9 bits (167), Expect = 5e-09 Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 7/136 (5%) Frame = -3 Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL-----PAAKGIMVPISEDVP-ISRSITIV 1699 MGLLD WD+T+AGP+P+ G G KLRK+ S ++ I+ P P ++RSITI Sbjct: 1 MGLLDQLWDETVAGPRPDSGLG-KLRKYSSFSPSSSSSSSSILAPAPAPAPAVTRSITIA 59 Query: 1698 KPVINTNNLRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERA-E 1522 +P +L +R R+ +S+ E A Sbjct: 60 RP----PSLSVESYSSSSVPSSPASTPDSPLAAATPPKADGWRRFRRKTKVSDGPEPAVG 115 Query: 1521 PRSPTVYDWVVISALD 1474 PRSPTVYDWVVIS+LD Sbjct: 116 PRSPTVYDWVVISSLD 131