BLASTX nr result

ID: Coptis24_contig00001024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001024
         (2021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632757.1| PREDICTED: auxin-repressed 12.5 kDa protein-...   100   2e-18
ref|XP_003528661.1| PREDICTED: uncharacterized protein LOC100820...    80   2e-12
ref|XP_002304241.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-10
gb|ACG37064.1| auxin-repressed protein [Zea mays] gi|414870259|t...    69   4e-09
ref|NP_001150341.1| LOC100283971 [Zea mays] gi|195638550|gb|ACG3...    69   5e-09

>ref|XP_003632757.1| PREDICTED: auxin-repressed 12.5 kDa protein-like [Vitis vinifera]
            gi|297742955|emb|CBI35822.3| unnamed protein product
            [Vitis vinifera]
          Length = 126

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 59/129 (45%), Positives = 73/129 (56%)
 Frame = -3

Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSLPAAKGIMVPISEDVPISRSITIVKPVINT 1681
            MG LD  WD+T+AGP PE G GK LRK+ SL AA+   +   ++V ++RSITI+K     
Sbjct: 1    MGFLDKLWDETVAGPPPETGLGK-LRKYKSLSAARSPPIINPDEVQVTRSITILK---TN 56

Query: 1680 NNLRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERAEPRSPTVY 1501
            ++ RNF                            D K  +RRK   EAFERAEPRSPTVY
Sbjct: 57   SSFRNFSPDSVSVPNSPAGSSAPESPFTPGTPTGDYKTDARRKAALEAFERAEPRSPTVY 116

Query: 1500 DWVVISALD 1474
            DW+VISALD
Sbjct: 117  DWIVISALD 125


>ref|XP_003528661.1| PREDICTED: uncharacterized protein LOC100820058 isoform 2 [Glycine
            max]
          Length = 122

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 51/129 (39%), Positives = 64/129 (49%)
 Frame = -3

Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSLPAAKGIMVPISEDVPISRSITIVKPVINT 1681
            MG L   WD+T+AGP PE G G KLRK++S      +   ++E VPISRSITIV+     
Sbjct: 3    MGFLHKLWDETLAGPAPETGLG-KLRKYNSFSGGSSVRSTVAEHVPISRSITIVRSQSGF 61

Query: 1680 NNLRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERAEPRSPTVY 1501
                                              D K+L+RRK  S   E AE RSPT+Y
Sbjct: 62   GTTTT--------TSAPSAPTTPRTPLTPEAPGGDFKKLTRRK--SSTVESAENRSPTIY 111

Query: 1500 DWVVISALD 1474
            DWV++SALD
Sbjct: 112  DWVIMSALD 120


>ref|XP_002304241.1| predicted protein [Populus trichocarpa] gi|222841673|gb|EEE79220.1|
            predicted protein [Populus trichocarpa]
          Length = 136

 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 51/137 (37%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
 Frame = -3

Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL-----PAAKGIMVPISEDVPISRSITIVK 1696
            MG L   WD+T+AGP P+ G G KLRK+DS      P          ED+ I+RSITIV+
Sbjct: 1    MGFLHKLWDETLAGPMPDSGLG-KLRKYDSFSVRSSPPVDAAAANSIEDMNITRSITIVR 59

Query: 1695 PVINTNNLRNF---XXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERA 1525
               ++  LRN                                D +R+  RK+  EA E  
Sbjct: 60   -TNSSKYLRNISVDPCSSPVSPATPSTPTTPLTPGITGTPRGDFRRIKARKSSDEALESG 118

Query: 1524 EPRSPTVYDWVVISALD 1474
            EPRS T+YDW+VI+ALD
Sbjct: 119  EPRSLTIYDWIVINALD 135


>gb|ACG37064.1| auxin-repressed protein [Zea mays] gi|414870259|tpg|DAA48816.1| TPA:
            auxin-repressed protein [Zea mays]
          Length = 131

 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
 Frame = -3

Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL----PAAKGIMVPISEDVP-ISRSITIVK 1696
            MGLLD  WD+T+AGP+P+ G G KLRK+ S      ++  I+ P     P ++RSITI +
Sbjct: 1    MGLLDQLWDETVAGPRPDSGLG-KLRKYSSFSPSSSSSSSILAPAPAPAPAVTRSITIAR 59

Query: 1695 PVINTNNLRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERA-EP 1519
            P     +L                                 +R  R+  +S+  E A  P
Sbjct: 60   P----PSLSVESYSSSSVPSSPASTPDSPLAAATPPKADVWRRFRRKTKVSDGPEPAVGP 115

Query: 1518 RSPTVYDWVVISALD 1474
            RSPTVYDWVVIS+LD
Sbjct: 116  RSPTVYDWVVISSLD 130


>ref|NP_001150341.1| LOC100283971 [Zea mays] gi|195638550|gb|ACG38743.1| auxin-repressed
            protein [Zea mays]
          Length = 132

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
 Frame = -3

Query: 1860 MGLLDNFWDDTIAGPKPEMGHGKKLRKFDSL-----PAAKGIMVPISEDVP-ISRSITIV 1699
            MGLLD  WD+T+AGP+P+ G G KLRK+ S       ++  I+ P     P ++RSITI 
Sbjct: 1    MGLLDQLWDETVAGPRPDSGLG-KLRKYSSFSPSSSSSSSSILAPAPAPAPAVTRSITIA 59

Query: 1698 KPVINTNNLRNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMKRLSRRKTMSEAFERA-E 1522
            +P     +L                                 +R  R+  +S+  E A  
Sbjct: 60   RP----PSLSVESYSSSSVPSSPASTPDSPLAAATPPKADGWRRFRRKTKVSDGPEPAVG 115

Query: 1521 PRSPTVYDWVVISALD 1474
            PRSPTVYDWVVIS+LD
Sbjct: 116  PRSPTVYDWVVISSLD 131


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