BLASTX nr result

ID: Coptis24_contig00001017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001017
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39615.3| unnamed protein product [Vitis vinifera]              318   2e-86
ref|XP_002277385.1| PREDICTED: thiosulfate sulfurtransferase/rho...   318   3e-86
ref|XP_003535318.1| PREDICTED: uncharacterized protein LOC100799...   322   6e-86
ref|XP_002330075.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
gb|AFK38443.1| unknown [Lotus japonicus]                              317   5e-84

>emb|CBI39615.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  318 bits (815), Expect(2) = 2e-86
 Identities = 156/239 (65%), Positives = 184/239 (76%)
 Frame = +2

Query: 203  PSRKLRILCLHGFRQNASNFKGRTASLAKKLKDIVELVFIDAPNELPFIYQPRPAETLDC 382
            PSRKLRILCLHGFRQNAS FKGRTASL KKLK I ELVF+DAP+ELPFIYQP   E    
Sbjct: 369  PSRKLRILCLHGFRQNASGFKGRTASLVKKLKSIAELVFVDAPHELPFIYQPCLQEPNSK 428

Query: 383  SVGLRLQPSPPPLENCKKKFAWLVAAKCNSLRGADWAMADEPFDPLQYQQQTDGFEVSLS 562
             +    Q SPPP  NC+KKFAWLV+   +    ++W  AD  FDPLQYQQQTDGF+VSL+
Sbjct: 429  DLSSLSQQSPPPA-NCRKKFAWLVSPDFSGASESNWKKADGQFDPLQYQQQTDGFDVSLA 487

Query: 563  YLNDIFTQMGPFDGVLGFSQGAAMVASLSVERGKLDGKIDFRFAILCSGFALHLEQLEPG 742
            YL  +F+Q GPFDG++GFSQGAAM A++S  RG+  G++DFRF ILCSGFAL+L     G
Sbjct: 488  YLKTVFSQAGPFDGIMGFSQGAAMAAAVSARRGRPGGEMDFRFVILCSGFALNLPDSVGG 547

Query: 743  SIDCPSLHIFGNSQGKDRQIACQASTDLANLFKQSCSVTVRHESGHIIPTQPPYIDRIK 919
            SI+CPSLHIFGN QG DRQIA QAS DLA  F++ CSV + H+SGH+IPT+ PYID I+
Sbjct: 548  SINCPSLHIFGNEQGNDRQIANQASRDLAASFEEGCSVIIEHDSGHMIPTRSPYIDEIR 606



 Score = 29.3 bits (64), Expect(2) = 2e-86
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 3   KVGATYVCELCQKDNIKNGPVHLDKNSRYQTESTLSEVSDGVEVAPVTLQERITISSQVA 182
           K  A YVCELCQK     G + L +N   Q       ++  +++  V   +  T+S Q+ 
Sbjct: 310 KKDALYVCELCQKHGKGYGSIPLIENDESQV------ITQPIKLKTVP-SDDTTLSPQIH 362

Query: 183 CRPG 194
            R G
Sbjct: 363 SRHG 366


>ref|XP_002277385.1| PREDICTED: thiosulfate sulfurtransferase/rhodanese-like
            domain-containing protein 2-like [Vitis vinifera]
          Length = 611

 Score =  318 bits (815), Expect(2) = 3e-86
 Identities = 156/239 (65%), Positives = 184/239 (76%)
 Frame = +2

Query: 203  PSRKLRILCLHGFRQNASNFKGRTASLAKKLKDIVELVFIDAPNELPFIYQPRPAETLDC 382
            PSRKLRILCLHGFRQNAS FKGRTASL KKLK I ELVF+DAP+ELPFIYQP   E    
Sbjct: 367  PSRKLRILCLHGFRQNASGFKGRTASLVKKLKSIAELVFVDAPHELPFIYQPCLQEPNSK 426

Query: 383  SVGLRLQPSPPPLENCKKKFAWLVAAKCNSLRGADWAMADEPFDPLQYQQQTDGFEVSLS 562
             +    Q SPPP  NC+KKFAWLV+   +    ++W  AD  FDPLQYQQQTDGF+VSL+
Sbjct: 427  DLSSLSQQSPPPA-NCRKKFAWLVSPDFSGASESNWKKADGQFDPLQYQQQTDGFDVSLA 485

Query: 563  YLNDIFTQMGPFDGVLGFSQGAAMVASLSVERGKLDGKIDFRFAILCSGFALHLEQLEPG 742
            YL  +F+Q GPFDG++GFSQGAAM A++S  RG+  G++DFRF ILCSGFAL+L     G
Sbjct: 486  YLKTVFSQAGPFDGIMGFSQGAAMAAAVSARRGRPGGEMDFRFVILCSGFALNLPDSVGG 545

Query: 743  SIDCPSLHIFGNSQGKDRQIACQASTDLANLFKQSCSVTVRHESGHIIPTQPPYIDRIK 919
            SI+CPSLHIFGN QG DRQIA QAS DLA  F++ CSV + H+SGH+IPT+ PYID I+
Sbjct: 546  SINCPSLHIFGNEQGNDRQIANQASRDLAASFEEGCSVIIEHDSGHMIPTRSPYIDEIR 604



 Score = 28.5 bits (62), Expect(2) = 3e-86
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 12  ATYVCELCQKDNIKNGPVHLDKNSRYQTESTLSEVSDGVEVAPVTLQERITISSQVACRP 191
           A YVCELCQK     G + L +N   Q       ++  +++  V   +  T+S Q+  R 
Sbjct: 311 ALYVCELCQKHGKGYGSIPLIENDESQV------ITQPIKLKTVP-SDDTTLSPQIHSRH 363

Query: 192 G 194
           G
Sbjct: 364 G 364


>ref|XP_003535318.1| PREDICTED: uncharacterized protein LOC100799148 [Glycine max]
          Length = 633

 Score =  322 bits (824), Expect(2) = 6e-86
 Identities = 154/239 (64%), Positives = 189/239 (79%), Gaps = 1/239 (0%)
 Frame = +2

Query: 206  SRKLRILCLHGFRQNASNFKGRTASLAKKLKDIVELVFIDAPNELPFIYQ-PRPAETLDC 382
            SRKLRILCLHGFRQNAS+FKGRTASLAKKLK + E VFIDAP+ELPFIYQ P P   ++C
Sbjct: 389  SRKLRILCLHGFRQNASSFKGRTASLAKKLKKMTEFVFIDAPHELPFIYQTPMPELNVNC 448

Query: 383  SVGLRLQPSPPPLENCKKKFAWLVAAKCNSLRGADWAMADEPFDPLQYQQQTDGFEVSLS 562
            +      P PPPL+NCKKKFAW VA   +    ADW +AD PFDPLQYQQQT+G+++S+S
Sbjct: 449  ASSSPPSP-PPPLDNCKKKFAWFVAPNFDGSSAADWKVADGPFDPLQYQQQTNGYDISVS 507

Query: 563  YLNDIFTQMGPFDGVLGFSQGAAMVASLSVERGKLDGKIDFRFAILCSGFALHLEQLEPG 742
            +L ++F+Q GPFDG+LGFSQGAAM A +S ++ KL G++DF+F +LCSGFAL ++++E G
Sbjct: 508  HLKNVFSQEGPFDGILGFSQGAAMTALISAQQEKLKGEMDFKFVVLCSGFALRMKEMECG 567

Query: 743  SIDCPSLHIFGNSQGKDRQIACQASTDLANLFKQSCSVTVRHESGHIIPTQPPYIDRIK 919
             I CPSLHIFGN  GKDRQIA QAS +LA+L+   CS  V H+ GHIIPT+ PYID IK
Sbjct: 568  PIKCPSLHIFGNEHGKDRQIANQASKELASLYDSDCSAIVEHDCGHIIPTRSPYIDEIK 626



 Score = 23.9 bits (50), Expect(2) = 6e-86
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 18  YVCELCQKDNIKNGPVHLDKNSRYQT 95
           YVCELCQK         L +N   +T
Sbjct: 334 YVCELCQKQGKAVRSTQLIENGESKT 359


>ref|XP_002330075.1| predicted protein [Populus trichocarpa] gi|222871500|gb|EEF08631.1|
            predicted protein [Populus trichocarpa]
          Length = 590

 Score =  320 bits (819), Expect(2) = 3e-85
 Identities = 160/262 (61%), Positives = 190/262 (72%), Gaps = 2/262 (0%)
 Frame = +2

Query: 140  CHLAGAYHYLISSRLQTG*GMPSRKLRILCLHGFRQNASNFKGRTASLAKKLKDIVELVF 319
            C L   +  +I S +      P RKLRILCLHGFRQNAS FKGRTASLAKKLK+I ELVF
Sbjct: 323  CELCQKHGKVIESNVAENGARPPRKLRILCLHGFRQNASGFKGRTASLAKKLKNIAELVF 382

Query: 320  IDAPNELPFIYQPRPAETLDCS--VGLRLQPSPPPLENCKKKFAWLVAAKCNSLRGADWA 493
            +DAP+ELPFIYQ   +E L+CS       Q   PP E C+ KFAWL+A  C      DW 
Sbjct: 383  VDAPHELPFIYQSCVSE-LECSDESSFSSQQILPPTETCRGKFAWLIAPDCKGRSATDWK 441

Query: 494  MADEPFDPLQYQQQTDGFEVSLSYLNDIFTQMGPFDGVLGFSQGAAMVASLSVERGKLDG 673
             AD PFDPLQY QQT+GF+VSLSYL  +F++ GPFDG+LGFSQGAAM A L  ++G+L G
Sbjct: 442  KADSPFDPLQYLQQTEGFDVSLSYLKTVFSRDGPFDGILGFSQGAAMAALLCAQKGRLKG 501

Query: 674  KIDFRFAILCSGFALHLEQLEPGSIDCPSLHIFGNSQGKDRQIACQASTDLANLFKQSCS 853
             IDFRFAILCSGFAL   ++E GSI+CPSLH+FG   GKDRQIA + S +LA+LF+  CS
Sbjct: 502  DIDFRFAILCSGFALPFVEIESGSINCPSLHVFGCVPGKDRQIANKTSRELASLFEDGCS 561

Query: 854  VTVRHESGHIIPTQPPYIDRIK 919
            V + H+ GHIIPT+ PYID IK
Sbjct: 562  VIIEHDFGHIIPTRTPYIDEIK 583



 Score = 23.5 bits (49), Expect(2) = 3e-85
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 3   KVGATYVCELCQK 41
           K  A Y CELCQK
Sbjct: 316 KEEAVYACELCQK 328


>gb|AFK38443.1| unknown [Lotus japonicus]
          Length = 422

 Score =  317 bits (811), Expect = 5e-84
 Identities = 153/239 (64%), Positives = 188/239 (78%), Gaps = 1/239 (0%)
 Frame = +2

Query: 206 SRKLRILCLHGFRQNASNFKGRTASLAKKLKDIVELVFIDAPNELPFIYQ-PRPAETLDC 382
           SRKLRILCLHGFRQNAS+FKGRTASLAKKLK + E +FIDAP+EL FIYQ P P   ++C
Sbjct: 178 SRKLRILCLHGFRQNASSFKGRTASLAKKLKKMSEFIFIDAPHELSFIYQTPTPVPDMNC 237

Query: 383 SVGLRLQPSPPPLENCKKKFAWLVAAKCNSLRGADWAMADEPFDPLQYQQQTDGFEVSLS 562
           +    L PSPPP ++C KKFAW VA   +   G DW +AD PFDPLQYQQ+T G+++SLS
Sbjct: 238 A-SPSLPPSPPPSQSCNKKFAWFVAQNFDRSSGVDWKVADGPFDPLQYQQRTAGYDISLS 296

Query: 563 YLNDIFTQMGPFDGVLGFSQGAAMVASLSVERGKLDGKIDFRFAILCSGFALHLEQLEPG 742
           +L  +F+Q GPFDG+LGFSQGAAM A +S ++ KL G++DF+F +LCSGFAL ++++E G
Sbjct: 297 HLKKVFSQEGPFDGILGFSQGAAMAALVSAQQEKLRGEMDFKFVVLCSGFALQVKEMEFG 356

Query: 743 SIDCPSLHIFGNSQGKDRQIACQASTDLANLFKQSCSVTVRHESGHIIPTQPPYIDRIK 919
            I CP LHIFGN QGKDRQIA QAS +LA+L+  SCSV V H+ GHIIPT+ PYID IK
Sbjct: 357 PIKCPCLHIFGNEQGKDRQIANQASKELASLYDDSCSVIVEHDCGHIIPTRSPYIDEIK 415


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