BLASTX nr result

ID: Coptis24_contig00001013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001013
         (1781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002339508.1| predicted protein [Populus trichocarpa] gi|2...   645   0.0  
ref|XP_004146893.1| PREDICTED: glutamate dehydrogenase 2-like [C...   644   0.0  
ref|XP_002321781.1| predicted protein [Populus trichocarpa] gi|2...   647   0.0  
ref|XP_004143666.1| PREDICTED: glutamate dehydrogenase 2-like [C...   641   0.0  
gb|ABR45724.1| GDH2 [Actinidia chinensis]                             641   0.0  

>ref|XP_002339508.1| predicted protein [Populus trichocarpa] gi|222832584|gb|EEE71061.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  645 bits (1664), Expect(2) = 0.0
 Identities = 306/352 (86%), Positives = 336/352 (95%)
 Frame = -3

Query: 1527 MNALAATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDGSLVSYIGFRVQHDN 1348
            MNALAAT+RNFRHA+R+LGLDSK+EKSLLIPFREIKVECTIPKDDG+LVSY+GFRVQHDN
Sbjct: 1    MNALAATSRNFRHASRLLGLDSKVEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDN 60

Query: 1347 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAVVDIPYGGAKGGIGCSPRDLSTSELERL 1168
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAV DIPYGGAKGGIGC+P DLS SELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAVADIPYGGAKGGIGCNPGDLSKSELERL 120

Query: 1167 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAIVTGKPIDLGGSLG 988
            TRVFTQKIHDLIG+HTDVPAPDMGTNAQTMAWILDEYSKFHGHSPA+VTGKPIDLGGSLG
Sbjct: 121  TRVFTQKIHDLIGVHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 987  RDAATGRGVVFATEALLAEHGKSIPEMRFVIQGFGNVGSWAAKLIHEKGGKITAVSDMTG 808
            R+AATGRGVVFATEALLAEHGKSI ++ F IQGFGNVGSWAAKLIHE+GGK+ AVSD+TG
Sbjct: 181  REAATGRGVVFATEALLAEHGKSIKDLTFAIQGFGNVGSWAAKLIHERGGKVIAVSDITG 240

Query: 807  AVQNPNGLDIPALLKHKENNGALKDFDGGDAIDPNELLVQDCDVLIPCALGGVLNKDNAA 628
            AV+NPNG+DIP LL+HKE  G+LKDF G +++D NELL+  CDVLIPCALGGVLN++NAA
Sbjct: 241  AVKNPNGIDIPELLRHKETTGSLKDFQGAESMDANELLIHKCDVLIPCALGGVLNRENAA 300

Query: 627  DVKAKYIIEAANHPTDPEADEILSKRGVTILPDIYANAGGVTVSYFEWVQNI 472
            DVKAK+IIEAANHPTDPEADEIL+K+GV +LPDIYAN+GGVTVSYFEWVQNI
Sbjct: 301  DVKAKFIIEAANHPTDPEADEILAKKGVVVLPDIYANSGGVTVSYFEWVQNI 352



 Score =  116 bits (290), Expect(2) = 0.0
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = -2

Query: 403 WVQNIQGFMWEEDKVNNELQKYMRRAFGNIKAMCQSQDCSLRMGAFTLGVSRVARATLLR 224
           WVQNIQGFMW+E +VNN LQ YM RAF NIK+MCQ+ DC+LRMGAFTLGVSRVARATLLR
Sbjct: 348 WVQNIQGFMWDEQQVNNTLQNYMTRAFHNIKSMCQTHDCNLRMGAFTLGVSRVARATLLR 407

Query: 223 GWEA 212
           GWEA
Sbjct: 408 GWEA 411


>ref|XP_004146893.1| PREDICTED: glutamate dehydrogenase 2-like [Cucumis sativus]
            gi|449528457|ref|XP_004171221.1| PREDICTED: glutamate
            dehydrogenase 2-like [Cucumis sativus]
          Length = 411

 Score =  644 bits (1660), Expect(2) = 0.0
 Identities = 311/352 (88%), Positives = 329/352 (93%)
 Frame = -3

Query: 1527 MNALAATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDGSLVSYIGFRVQHDN 1348
            MNAL ATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDGSLVSY+GFRVQHDN
Sbjct: 1    MNALQATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDN 60

Query: 1347 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAVVDIPYGGAKGGIGCSPRDLSTSELERL 1168
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWK+AV DIPYGGAKGGIGC+PR+LS SELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPRELSNSELERL 120

Query: 1167 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAIVTGKPIDLGGSLG 988
            TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPA+VTGKPIDLGGSLG
Sbjct: 121  TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 987  RDAATGRGVVFATEALLAEHGKSIPEMRFVIQGFGNVGSWAAKLIHEKGGKITAVSDMTG 808
            R+AATGRGVVFATEALLAEHGK I  M F IQGFGNVG WA+KLIHEKGGK+ AVSD+TG
Sbjct: 181  REAATGRGVVFATEALLAEHGKQIKNMTFAIQGFGNVGYWASKLIHEKGGKVVAVSDITG 240

Query: 807  AVQNPNGLDIPALLKHKENNGALKDFDGGDAIDPNELLVQDCDVLIPCALGGVLNKDNAA 628
            AV NPNG+DI  L KHKE+ G+L +F G D +DPNELLV DCDVLIPCALGGVLN++NA 
Sbjct: 241  AVTNPNGIDIQELYKHKESTGSLVNFQGADDMDPNELLVHDCDVLIPCALGGVLNRENAG 300

Query: 627  DVKAKYIIEAANHPTDPEADEILSKRGVTILPDIYANAGGVTVSYFEWVQNI 472
             VKAK+IIEAANHPTDPEADEILSK+GV ILPDIYANAGGVTVSYFEWVQNI
Sbjct: 301  SVKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANAGGVTVSYFEWVQNI 352



 Score =  117 bits (292), Expect(2) = 0.0
 Identities = 53/64 (82%), Positives = 59/64 (92%)
 Frame = -2

Query: 403 WVQNIQGFMWEEDKVNNELQKYMRRAFGNIKAMCQSQDCSLRMGAFTLGVSRVARATLLR 224
           WVQNIQGFMW+EDKVN ELQ+YM RAF NIK MC++ DC+LRMGAFTLGV+RVARATLLR
Sbjct: 348 WVQNIQGFMWDEDKVNTELQRYMTRAFHNIKNMCKTHDCNLRMGAFTLGVNRVARATLLR 407

Query: 223 GWEA 212
           GWEA
Sbjct: 408 GWEA 411


>ref|XP_002321781.1| predicted protein [Populus trichocarpa] gi|222868777|gb|EEF05908.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  647 bits (1668), Expect(2) = 0.0
 Identities = 307/352 (87%), Positives = 337/352 (95%)
 Frame = -3

Query: 1527 MNALAATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDGSLVSYIGFRVQHDN 1348
            MNALAATNRNFRHAARILGLDSK+EKSLLIPFREIKVECTIPKDDG+L SYIGFRVQHDN
Sbjct: 1    MNALAATNRNFRHAARILGLDSKVEKSLLIPFREIKVECTIPKDDGTLASYIGFRVQHDN 60

Query: 1347 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAVVDIPYGGAKGGIGCSPRDLSTSELERL 1168
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAV DIPYGGAKGGIGC+P DLS SELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAVADIPYGGAKGGIGCNPGDLSKSELERL 120

Query: 1167 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAIVTGKPIDLGGSLG 988
            TRVFTQKIHDLIG+HTDVPAPDMGTNAQTMAWILDEYSKFHGHSPA+VTGKPIDLGGSLG
Sbjct: 121  TRVFTQKIHDLIGVHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 987  RDAATGRGVVFATEALLAEHGKSIPEMRFVIQGFGNVGSWAAKLIHEKGGKITAVSDMTG 808
            R+AATGRGVVFATEALLAEHGKSI  + F +QGFGNVGSWAAK+IHE+GGK+ AVSD++G
Sbjct: 181  REAATGRGVVFATEALLAEHGKSIKGLTFAVQGFGNVGSWAAKIIHERGGKVIAVSDISG 240

Query: 807  AVQNPNGLDIPALLKHKENNGALKDFDGGDAIDPNELLVQDCDVLIPCALGGVLNKDNAA 628
            AV+NPNG+DIP L++HKE+ G+LK+F GGD++D NELLV +CDVLIPCALGGVLN++NAA
Sbjct: 241  AVKNPNGIDIPELIRHKESTGSLKNFQGGDSMDANELLVHECDVLIPCALGGVLNRENAA 300

Query: 627  DVKAKYIIEAANHPTDPEADEILSKRGVTILPDIYANAGGVTVSYFEWVQNI 472
            DVKAK+IIEAANHPTDPEADEIL+K+GV +LPDIYAN+GGVTVSYFEWVQNI
Sbjct: 301  DVKAKFIIEAANHPTDPEADEILAKKGVVVLPDIYANSGGVTVSYFEWVQNI 352



 Score =  113 bits (282), Expect(2) = 0.0
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = -2

Query: 403 WVQNIQGFMWEEDKVNNELQKYMRRAFGNIKAMCQSQDCSLRMGAFTLGVSRVARATLLR 224
           WVQNIQGFMW+E++VN  LQ YM RAF NIK MCQ+ DC+LRMGAFTLGV+RVARATLLR
Sbjct: 348 WVQNIQGFMWDEEQVNKTLQNYMTRAFHNIKVMCQTHDCNLRMGAFTLGVNRVARATLLR 407

Query: 223 GWEA 212
           GWEA
Sbjct: 408 GWEA 411


>ref|XP_004143666.1| PREDICTED: glutamate dehydrogenase 2-like [Cucumis sativus]
            gi|449488611|ref|XP_004158111.1| PREDICTED: LOW QUALITY
            PROTEIN: glutamate dehydrogenase 2-like [Cucumis sativus]
          Length = 411

 Score =  641 bits (1654), Expect(2) = 0.0
 Identities = 305/352 (86%), Positives = 332/352 (94%)
 Frame = -3

Query: 1527 MNALAATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDGSLVSYIGFRVQHDN 1348
            MNALAATNRNFRHAARILGLDSK+EKSLLIPFREIKVECTIPKDDGSLVSY+GFRVQHDN
Sbjct: 1    MNALAATNRNFRHAARILGLDSKIEKSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDN 60

Query: 1347 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAVVDIPYGGAKGGIGCSPRDLSTSELERL 1168
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWK+AV DIPYGGAKGGIGC+PR+LS SELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCTPRELSMSELERL 120

Query: 1167 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAIVTGKPIDLGGSLG 988
            TRVFTQKIHDLIGIHTD+PAPDMGTNAQTMAWILDEYSKFHGHSPA+VTGKP+DLGGSLG
Sbjct: 121  TRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPLDLGGSLG 180

Query: 987  RDAATGRGVVFATEALLAEHGKSIPEMRFVIQGFGNVGSWAAKLIHEKGGKITAVSDMTG 808
            RDAATGRGVVFATEALLAEHG  I ++ FVIQGFGNVGSWAA+LIHE+GGK+ AVSD+TG
Sbjct: 181  RDAATGRGVVFATEALLAEHGMKIKDLTFVIQGFGNVGSWAARLIHERGGKVVAVSDITG 240

Query: 807  AVQNPNGLDIPALLKHKENNGALKDFDGGDAIDPNELLVQDCDVLIPCALGGVLNKDNAA 628
            AV NPNG+D+P L+ HKE   +L +F G D +DPNELLV +CDVLIPCALGGVLN++NAA
Sbjct: 241  AVTNPNGIDVPELIIHKEKTNSLVNFQGADGMDPNELLVHECDVLIPCALGGVLNRENAA 300

Query: 627  DVKAKYIIEAANHPTDPEADEILSKRGVTILPDIYANAGGVTVSYFEWVQNI 472
             V+AK+I+EAANHPTDPEADEILSK+GV ILPDIYANAGGVTVSYFEWVQNI
Sbjct: 301  GVRAKFIVEAANHPTDPEADEILSKKGVLILPDIYANAGGVTVSYFEWVQNI 352



 Score =  118 bits (296), Expect(2) = 0.0
 Identities = 54/64 (84%), Positives = 60/64 (93%)
 Frame = -2

Query: 403 WVQNIQGFMWEEDKVNNELQKYMRRAFGNIKAMCQSQDCSLRMGAFTLGVSRVARATLLR 224
           WVQNIQGFMW+E+KVN ELQ+YM RAF NIK+MC+S DCSLRMGAFTLGV+RVARATLLR
Sbjct: 348 WVQNIQGFMWDEEKVNKELQRYMTRAFYNIKSMCKSHDCSLRMGAFTLGVNRVARATLLR 407

Query: 223 GWEA 212
           GWEA
Sbjct: 408 GWEA 411


>gb|ABR45724.1| GDH2 [Actinidia chinensis]
          Length = 411

 Score =  641 bits (1654), Expect(2) = 0.0
 Identities = 305/352 (86%), Positives = 337/352 (95%)
 Frame = -3

Query: 1527 MNALAATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDGSLVSYIGFRVQHDN 1348
            MNALAATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDG+LVSY+GFRVQHDN
Sbjct: 1    MNALAATNRNFRHAARILGLDSKLEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDN 60

Query: 1347 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKSAVVDIPYGGAKGGIGCSPRDLSTSELERL 1168
            +RGPMKGGIRYHPEVDPDEVNALAQLMTWK+AV DIPYGGAKGGIGC+P+DLS SE ERL
Sbjct: 61   SRGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCTPKDLSKSEWERL 120

Query: 1167 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAIVTGKPIDLGGSLG 988
            TRVFTQKIHDLIG++ DVPAPDMGTNAQTMAWILDEYSKFHG+SPAIVTGKPIDLGGSLG
Sbjct: 121  TRVFTQKIHDLIGVNMDVPAPDMGTNAQTMAWILDEYSKFHGYSPAIVTGKPIDLGGSLG 180

Query: 987  RDAATGRGVVFATEALLAEHGKSIPEMRFVIQGFGNVGSWAAKLIHEKGGKITAVSDMTG 808
            R+AATGRGVV+ATEALLAEHGKSI ++ FVIQGFGNVGSWAA+LIHE+GGK+ AVSD+TG
Sbjct: 181  REAATGRGVVYATEALLAEHGKSIKDLTFVIQGFGNVGSWAARLIHERGGKVVAVSDITG 240

Query: 807  AVQNPNGLDIPALLKHKENNGALKDFDGGDAIDPNELLVQDCDVLIPCALGGVLNKDNAA 628
            AV+NPNG+DI +LL HKE  G+L +FDGGDA+DPNELL++DCDVLIPCALGGVLN++NA 
Sbjct: 241  AVKNPNGIDIQSLLNHKEATGSLNNFDGGDAMDPNELLIEDCDVLIPCALGGVLNRENAG 300

Query: 627  DVKAKYIIEAANHPTDPEADEILSKRGVTILPDIYANAGGVTVSYFEWVQNI 472
             V+AK+IIEAANHPTDPEADEILSK+GV +LPDIYAN+GGVTVSYFEWVQNI
Sbjct: 301  KVRAKFIIEAANHPTDPEADEILSKKGVIVLPDIYANSGGVTVSYFEWVQNI 352



 Score =  116 bits (290), Expect(2) = 0.0
 Identities = 52/64 (81%), Positives = 59/64 (92%)
 Frame = -2

Query: 403 WVQNIQGFMWEEDKVNNELQKYMRRAFGNIKAMCQSQDCSLRMGAFTLGVSRVARATLLR 224
           WVQNIQGFMW+E+KVN EL +YM RAFGNIK MCQ+ +CSLRMGAFTLGV+RVARAT+LR
Sbjct: 348 WVQNIQGFMWDEEKVNKELHRYMTRAFGNIKNMCQTHNCSLRMGAFTLGVNRVARATVLR 407

Query: 223 GWEA 212
           GWEA
Sbjct: 408 GWEA 411


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