BLASTX nr result

ID: Coptis24_contig00001012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001012
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326882.1| predicted protein [Populus trichocarpa] gi|2...   205   4e-51
ref|XP_002281736.2| PREDICTED: dynamin-related protein 1E isofor...   203   1e-50
ref|XP_003631492.1| PREDICTED: dynamin-related protein 1E [Vitis...   203   1e-50
ref|XP_002281722.1| PREDICTED: dynamin-related protein 1E isofor...   203   1e-50
ref|XP_003633899.1| PREDICTED: dynamin-related protein 1E [Vitis...   198   4e-49

>ref|XP_002326882.1| predicted protein [Populus trichocarpa] gi|222835197|gb|EEE73632.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  205 bits (521), Expect = 4e-51
 Identities = 109/154 (70%), Positives = 119/154 (77%), Gaps = 6/154 (3%)
 Frame = +3

Query: 3   ESSYLTVDFFRKLPQEVENKPGNPAAP------TVDRFSEGHFRRIGLNVSSYVAMVSET 164
           ESSYLTVDFFR+LPQEVENK GNPA P      TVDR+SE HFRRIG NVSSYV MVSET
Sbjct: 487 ESSYLTVDFFRRLPQEVENKGGNPATPANLASSTVDRYSEMHFRRIGSNVSSYVGMVSET 546

Query: 165 LRNNIPKSVVYCQVREAKXXXXXXXXXXXXXXXXXXXXSLLDIFYTQIGRKEGKQLGQML 344
           LRN IPK+VV+CQV+EAK                    SLL+ FYTQIG+KEGKQL Q+L
Sbjct: 547 LRNTIPKAVVHCQVKEAKQ-------------------SLLNYFYTQIGKKEGKQLSQLL 587

Query: 345 DEDPALMERRLQCAKRLELYKSARDEIDSVSWAR 446
           DEDPALMERR QCAKRLELYK+ARDE+DSVSWAR
Sbjct: 588 DEDPALMERRQQCAKRLELYKAARDEVDSVSWAR 621


>ref|XP_002281736.2| PREDICTED: dynamin-related protein 1E isoform 2 [Vitis vinifera]
          Length = 596

 Score =  203 bits (516), Expect = 1e-50
 Identities = 107/148 (72%), Positives = 117/148 (79%)
 Frame = +3

Query: 3   ESSYLTVDFFRKLPQEVENKPGNPAAPTVDRFSEGHFRRIGLNVSSYVAMVSETLRNNIP 182
           ESSYLTVDFFRKLPQEVE K GNP+A   DR+ EGHFRRIG NVS YVAMVSETL+N+IP
Sbjct: 469 ESSYLTVDFFRKLPQEVE-KGGNPSASAADRYGEGHFRRIGSNVSQYVAMVSETLKNSIP 527

Query: 183 KSVVYCQVREAKXXXXXXXXXXXXXXXXXXXXSLLDIFYTQIGRKEGKQLGQMLDEDPAL 362
           K+VV+CQVREAK                    SLLD FYTQ+G+KEGKQL Q+LDEDPAL
Sbjct: 528 KAVVHCQVREAKR-------------------SLLDHFYTQVGKKEGKQLSQLLDEDPAL 568

Query: 363 MERRLQCAKRLELYKSARDEIDSVSWAR 446
           MERR QCAKRLELYKSARDEIDSVSW+R
Sbjct: 569 MERRQQCAKRLELYKSARDEIDSVSWSR 596


>ref|XP_003631492.1| PREDICTED: dynamin-related protein 1E [Vitis vinifera]
          Length = 607

 Score =  203 bits (516), Expect = 1e-50
 Identities = 107/148 (72%), Positives = 117/148 (79%)
 Frame = +3

Query: 3   ESSYLTVDFFRKLPQEVENKPGNPAAPTVDRFSEGHFRRIGLNVSSYVAMVSETLRNNIP 182
           ESSYLTVDFFRKLPQEVE K GNP+A   DR+ EGHFRRIG NVS YVAMVSETL+N+IP
Sbjct: 480 ESSYLTVDFFRKLPQEVE-KGGNPSASAADRYGEGHFRRIGSNVSQYVAMVSETLKNSIP 538

Query: 183 KSVVYCQVREAKXXXXXXXXXXXXXXXXXXXXSLLDIFYTQIGRKEGKQLGQMLDEDPAL 362
           K+VV+CQVREAK                    SLLD FYTQ+G+KEGKQL Q+LDEDPAL
Sbjct: 539 KAVVHCQVREAKR-------------------SLLDHFYTQVGKKEGKQLSQLLDEDPAL 579

Query: 363 MERRLQCAKRLELYKSARDEIDSVSWAR 446
           MERR QCAKRLELYKSARDEIDSVSW+R
Sbjct: 580 MERRQQCAKRLELYKSARDEIDSVSWSR 607


>ref|XP_002281722.1| PREDICTED: dynamin-related protein 1E isoform 1 [Vitis vinifera]
           gi|297742146|emb|CBI33933.3| unnamed protein product
           [Vitis vinifera]
          Length = 613

 Score =  203 bits (516), Expect = 1e-50
 Identities = 107/148 (72%), Positives = 117/148 (79%)
 Frame = +3

Query: 3   ESSYLTVDFFRKLPQEVENKPGNPAAPTVDRFSEGHFRRIGLNVSSYVAMVSETLRNNIP 182
           ESSYLTVDFFRKLPQEVE K GNP+A   DR+ EGHFRRIG NVS YVAMVSETL+N+IP
Sbjct: 486 ESSYLTVDFFRKLPQEVE-KGGNPSASAADRYGEGHFRRIGSNVSQYVAMVSETLKNSIP 544

Query: 183 KSVVYCQVREAKXXXXXXXXXXXXXXXXXXXXSLLDIFYTQIGRKEGKQLGQMLDEDPAL 362
           K+VV+CQVREAK                    SLLD FYTQ+G+KEGKQL Q+LDEDPAL
Sbjct: 545 KAVVHCQVREAKR-------------------SLLDHFYTQVGKKEGKQLSQLLDEDPAL 585

Query: 363 MERRLQCAKRLELYKSARDEIDSVSWAR 446
           MERR QCAKRLELYKSARDEIDSVSW+R
Sbjct: 586 MERRQQCAKRLELYKSARDEIDSVSWSR 613


>ref|XP_003633899.1| PREDICTED: dynamin-related protein 1E [Vitis vinifera]
          Length = 613

 Score =  198 bits (504), Expect = 4e-49
 Identities = 106/152 (69%), Positives = 117/152 (76%), Gaps = 4/152 (2%)
 Frame = +3

Query: 3   ESSYLTVDFFRKLPQEVEN----KPGNPAAPTVDRFSEGHFRRIGLNVSSYVAMVSETLR 170
           E+SYLTV+FFRKLPQEVE       GNPAA TVDR++EGHFRRI  NVSSYV MVS+TLR
Sbjct: 481 EASYLTVEFFRKLPQEVEKVGNPAGGNPAASTVDRYTEGHFRRIASNVSSYVNMVSDTLR 540

Query: 171 NNIPKSVVYCQVREAKXXXXXXXXXXXXXXXXXXXXSLLDIFYTQIGRKEGKQLGQMLDE 350
           N IPK+VV+CQVREAK                    SLL++FYTQIG+KEGKQL QMLDE
Sbjct: 541 NTIPKAVVHCQVREAKQ-------------------SLLNLFYTQIGKKEGKQLSQMLDE 581

Query: 351 DPALMERRLQCAKRLELYKSARDEIDSVSWAR 446
           DPALMERR QCAKRLELYK+ARDEIDSVSW R
Sbjct: 582 DPALMERRQQCAKRLELYKAARDEIDSVSWVR 613


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