BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001008
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putativ...    62   4e-08
ref|XP_002318665.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002866536.1| hypothetical protein ARALYDRAFT_496494 [Arab...    59   5e-07
ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   7e-07
ref|NP_974985.1| DEAD-box ATP-dependent RNA helicase 30 [Arabido...    57   1e-06

>ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547784|gb|EEF49276.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 540

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/39 (66%), Positives = 37/39 (94%)
 Frame = -2

Query: 117 KGDLNDISLPKANFGNLVPFKKDFYIESPSVRLMTEHDV 1
           +GDL++I+LPK +FGNLVPF+K+FYIE+PSV+ M+EH+V
Sbjct: 166 RGDLDNIALPKQDFGNLVPFEKNFYIENPSVQAMSEHEV 204


>ref|XP_002318665.1| predicted protein [Populus trichocarpa] gi|222859338|gb|EEE96885.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/39 (61%), Positives = 36/39 (92%)
 Frame = -2

Query: 117 KGDLNDISLPKANFGNLVPFKKDFYIESPSVRLMTEHDV 1
           KG+L++I+LPK +FGNLVPF+K+FY E+PS+R ++EH+V
Sbjct: 61  KGELDNIALPKQDFGNLVPFEKNFYFENPSIRALSEHEV 99


>ref|XP_002866536.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
           lyrata] gi|297312371|gb|EFH42795.1| hypothetical protein
           ARALYDRAFT_496494 [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = -2

Query: 117 KGDLNDISLPKANFGNLVPFKKDFYIESPSVRLMTEHDV 1
           K +L+ +SLPK NFGNLV F+K+FY+ESPSV+ MTE DV
Sbjct: 103 KRELDSVSLPKQNFGNLVHFEKNFYVESPSVQAMTEQDV 141


>ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
           sativus] gi|449522189|ref|XP_004168110.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
           sativus]
          Length = 622

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -2

Query: 117 KGDLNDISLPKANFGNLVPFKKDFYIESPSVRLMTEHDV 1
           +GDL++I LP  NFGNLVPF+K+FY E PSVR MTE +V
Sbjct: 142 RGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180


>ref|NP_974985.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
           gi|108861888|sp|Q8W4R3.2|RH30_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 30
           gi|110741550|dbj|BAE98724.1| ATP-dependent RNA
           helicase-like protein [Arabidopsis thaliana]
           gi|332010323|gb|AED97706.1| DEAD-box ATP-dependent RNA
           helicase 30 [Arabidopsis thaliana]
          Length = 591

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = -2

Query: 117 KGDLNDISLPKANFGNLVPFKKDFYIESPSVRLMTEHDV 1
           K +L+ +SLPK NFGNLV F+K+FY+ESP+V+ MTE DV
Sbjct: 106 KRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAMTEQDV 144