BLASTX nr result
ID: Coptis24_contig00000937
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000937 (475 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264154.1| PREDICTED: chaperone protein dnaJ 20, chloro... 113 1e-23 ref|XP_003524933.1| PREDICTED: chaperone protein dnaJ 20, chloro... 108 6e-22 ref|XP_002518039.1| Chaperone protein dnaJ 20, chloroplast precu... 107 1e-21 ref|XP_002328862.1| predicted protein [Populus trichocarpa] gi|2... 105 3e-21 gb|ABK95188.1| unknown [Populus trichocarpa] 105 3e-21 >ref|XP_002264154.1| PREDICTED: chaperone protein dnaJ 20, chloroplastic [Vitis vinifera] gi|147777520|emb|CAN64811.1| hypothetical protein VITISV_024996 [Vitis vinifera] gi|298205225|emb|CBI17284.3| unnamed protein product [Vitis vinifera] Length = 216 Score = 113 bits (283), Expect = 1e-23 Identities = 60/121 (49%), Positives = 70/121 (57%) Frame = +1 Query: 106 SKYTRFRTKATVNDQVMVTESEARMSFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 285 ++Y +TKAT+ND+ + A MSFY Sbjct: 52 ARYASLKTKATINDEFLTEPEAAAMSFYELLGIPESGTLLEIKQAYK------------- 98 Query: 286 XQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSARKA 465 LARKYHPDVSPP R +EYT+RFI VQEAYETLSDP RRA+YD D+A GLHLAFSARK Sbjct: 99 -SLARKYHPDVSPPGRVKEYTRRFIWVQEAYETLSDPQRRALYDRDLAMGLHLAFSARKT 157 Query: 466 Y 468 Y Sbjct: 158 Y 158 >ref|XP_003524933.1| PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Glycine max] Length = 184 Score = 108 bits (269), Expect = 6e-22 Identities = 51/61 (83%), Positives = 56/61 (91%) Frame = +1 Query: 289 QLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSARKAY 468 QLARKYHPDVSPP R EEYTKRFI VQEAYETLSDPSRRAMYD DMARG++LAF+AR+ Y Sbjct: 71 QLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSRRAMYDKDMARGINLAFNARRRY 130 Query: 469 D 471 + Sbjct: 131 N 131 >ref|XP_002518039.1| Chaperone protein dnaJ 20, chloroplast precursor, putative [Ricinus communis] gi|223542635|gb|EEF44172.1| Chaperone protein dnaJ 20, chloroplast precursor, putative [Ricinus communis] Length = 201 Score = 107 bits (266), Expect = 1e-21 Identities = 63/137 (45%), Positives = 74/137 (54%) Frame = +1 Query: 58 THHPKSPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYXXXXXXXXXXXXXXXX 237 T P L V+ + F+TKA V+D++ + +SFY Sbjct: 30 TKSKPGPFLRLKPVTRFPMSSFKTKAAVSDRIATKD----LSFYELLGIPESGSLIDIKQ 85 Query: 238 XXXXXXXXXXXXXXXXXQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYD 417 QLARKYHPDVSPP+R EYT+RFI VQEAYETLSDP RRA YD Sbjct: 86 AYK--------------QLARKYHPDVSPPDRVHEYTQRFIQVQEAYETLSDPRRRATYD 131 Query: 418 HDMARGLHLAFSARKAY 468 DMARGLHLAFSAR+ Y Sbjct: 132 RDMARGLHLAFSARRRY 148 >ref|XP_002328862.1| predicted protein [Populus trichocarpa] gi|222839292|gb|EEE77629.1| predicted protein [Populus trichocarpa] Length = 196 Score = 105 bits (263), Expect = 3e-21 Identities = 63/132 (47%), Positives = 73/132 (55%) Frame = +1 Query: 73 SPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYXXXXXXXXXXXXXXXXXXXXX 252 +P L VS F+TKAT+N +V + MSFY Sbjct: 26 NPILRVKTVSRIPIGSFKTKATINAKVGAELGQ--MSFYELLGITESGTLPEIKQAYK-- 81 Query: 253 XXXXXXXXXXXXQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMAR 432 QLARKYHPDVSPP+R EEYT+RFI VQEAYETLSDP R +YD DMA+ Sbjct: 82 ------------QLARKYHPDVSPPDRVEEYTRRFIRVQEAYETLSDPRMREIYDRDMAK 129 Query: 433 GLHLAFSARKAY 468 GLHLAFSAR+ Y Sbjct: 130 GLHLAFSARRRY 141 >gb|ABK95188.1| unknown [Populus trichocarpa] Length = 196 Score = 105 bits (263), Expect = 3e-21 Identities = 63/132 (47%), Positives = 73/132 (55%) Frame = +1 Query: 73 SPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYXXXXXXXXXXXXXXXXXXXXX 252 +P L VS F+TKAT+N +V + MSFY Sbjct: 26 NPILRVKTVSRIPIGSFKTKATINAKVGAELGQ--MSFYELLGITESGTLPEIKQAYK-- 81 Query: 253 XXXXXXXXXXXXQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMAR 432 QLARKYHPDVSPP+R EEYT+RFI VQEAYETLSDP R +YD DMA+ Sbjct: 82 ------------QLARKYHPDVSPPDRVEEYTRRFIRVQEAYETLSDPRMREIYDRDMAK 129 Query: 433 GLHLAFSARKAY 468 GLHLAFSAR+ Y Sbjct: 130 GLHLAFSARRRY 141