BLASTX nr result

ID: Coptis24_contig00000937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000937
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264154.1| PREDICTED: chaperone protein dnaJ 20, chloro...   113   1e-23
ref|XP_003524933.1| PREDICTED: chaperone protein dnaJ 20, chloro...   108   6e-22
ref|XP_002518039.1| Chaperone protein dnaJ 20, chloroplast precu...   107   1e-21
ref|XP_002328862.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
gb|ABK95188.1| unknown [Populus trichocarpa]                          105   3e-21

>ref|XP_002264154.1| PREDICTED: chaperone protein dnaJ 20, chloroplastic [Vitis
           vinifera] gi|147777520|emb|CAN64811.1| hypothetical
           protein VITISV_024996 [Vitis vinifera]
           gi|298205225|emb|CBI17284.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/121 (49%), Positives = 70/121 (57%)
 Frame = +1

Query: 106 SKYTRFRTKATVNDQVMVTESEARMSFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 285
           ++Y   +TKAT+ND+ +     A MSFY                                
Sbjct: 52  ARYASLKTKATINDEFLTEPEAAAMSFYELLGIPESGTLLEIKQAYK------------- 98

Query: 286 XQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSARKA 465
             LARKYHPDVSPP R +EYT+RFI VQEAYETLSDP RRA+YD D+A GLHLAFSARK 
Sbjct: 99  -SLARKYHPDVSPPGRVKEYTRRFIWVQEAYETLSDPQRRALYDRDLAMGLHLAFSARKT 157

Query: 466 Y 468
           Y
Sbjct: 158 Y 158


>ref|XP_003524933.1| PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Glycine
           max]
          Length = 184

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/61 (83%), Positives = 56/61 (91%)
 Frame = +1

Query: 289 QLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSARKAY 468
           QLARKYHPDVSPP R EEYTKRFI VQEAYETLSDPSRRAMYD DMARG++LAF+AR+ Y
Sbjct: 71  QLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSRRAMYDKDMARGINLAFNARRRY 130

Query: 469 D 471
           +
Sbjct: 131 N 131


>ref|XP_002518039.1| Chaperone protein dnaJ 20, chloroplast precursor, putative [Ricinus
           communis] gi|223542635|gb|EEF44172.1| Chaperone protein
           dnaJ 20, chloroplast precursor, putative [Ricinus
           communis]
          Length = 201

 Score =  107 bits (266), Expect = 1e-21
 Identities = 63/137 (45%), Positives = 74/137 (54%)
 Frame = +1

Query: 58  THHPKSPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYXXXXXXXXXXXXXXXX 237
           T     P L    V+    + F+TKA V+D++   +    +SFY                
Sbjct: 30  TKSKPGPFLRLKPVTRFPMSSFKTKAAVSDRIATKD----LSFYELLGIPESGSLIDIKQ 85

Query: 238 XXXXXXXXXXXXXXXXXQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYD 417
                            QLARKYHPDVSPP+R  EYT+RFI VQEAYETLSDP RRA YD
Sbjct: 86  AYK--------------QLARKYHPDVSPPDRVHEYTQRFIQVQEAYETLSDPRRRATYD 131

Query: 418 HDMARGLHLAFSARKAY 468
            DMARGLHLAFSAR+ Y
Sbjct: 132 RDMARGLHLAFSARRRY 148


>ref|XP_002328862.1| predicted protein [Populus trichocarpa] gi|222839292|gb|EEE77629.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  105 bits (263), Expect = 3e-21
 Identities = 63/132 (47%), Positives = 73/132 (55%)
 Frame = +1

Query: 73  SPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYXXXXXXXXXXXXXXXXXXXXX 252
           +P L    VS      F+TKAT+N +V     +  MSFY                     
Sbjct: 26  NPILRVKTVSRIPIGSFKTKATINAKVGAELGQ--MSFYELLGITESGTLPEIKQAYK-- 81

Query: 253 XXXXXXXXXXXXQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMAR 432
                       QLARKYHPDVSPP+R EEYT+RFI VQEAYETLSDP  R +YD DMA+
Sbjct: 82  ------------QLARKYHPDVSPPDRVEEYTRRFIRVQEAYETLSDPRMREIYDRDMAK 129

Query: 433 GLHLAFSARKAY 468
           GLHLAFSAR+ Y
Sbjct: 130 GLHLAFSARRRY 141


>gb|ABK95188.1| unknown [Populus trichocarpa]
          Length = 196

 Score =  105 bits (263), Expect = 3e-21
 Identities = 63/132 (47%), Positives = 73/132 (55%)
 Frame = +1

Query: 73  SPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYXXXXXXXXXXXXXXXXXXXXX 252
           +P L    VS      F+TKAT+N +V     +  MSFY                     
Sbjct: 26  NPILRVKTVSRIPIGSFKTKATINAKVGAELGQ--MSFYELLGITESGTLPEIKQAYK-- 81

Query: 253 XXXXXXXXXXXXQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMAR 432
                       QLARKYHPDVSPP+R EEYT+RFI VQEAYETLSDP  R +YD DMA+
Sbjct: 82  ------------QLARKYHPDVSPPDRVEEYTRRFIRVQEAYETLSDPRMREIYDRDMAK 129

Query: 433 GLHLAFSARKAY 468
           GLHLAFSAR+ Y
Sbjct: 130 GLHLAFSARRRY 141


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