BLASTX nr result

ID: Coptis24_contig00000911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000911
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19280.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248...    78   8e-13
emb|CAN68129.1| hypothetical protein VITISV_043707 [Vitis vinifera]    78   8e-13
gb|AFW68993.1| rab geranylgeranyl transferase like protein [Zea ...    77   1e-12
ref|XP_003563406.1| PREDICTED: uncharacterized protein LOC100838...    77   1e-12

>emb|CBI19280.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +2

Query: 20  ICSKLLKLNPEFYIGWNYRKLVFEHTL-HGETDREYVKSIVTEELELVKTALIKNTKSYG 196
           I +KLL+ NPE Y  WNYRKL  EH L H E+D + VKSI +EEL +V+ +L +N KSYG
Sbjct: 47  ISAKLLEANPESYTAWNYRKLAVEHNLSHSESDPDTVKSIFSEELRVVENSLKQNFKSYG 106

Query: 197 AWYH 208
           AW+H
Sbjct: 107 AWHH 110


>ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248920 [Vitis vinifera]
          Length = 704

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +2

Query: 20  ICSKLLKLNPEFYIGWNYRKLVFEHTL-HGETDREYVKSIVTEELELVKTALIKNTKSYG 196
           I +KLL+ NPE Y  WNYRKL  EH L H E+D + VKSI +EEL +V+ +L +N KSYG
Sbjct: 47  ISAKLLEANPESYTAWNYRKLAVEHNLSHSESDPDTVKSIFSEELRVVENSLKQNFKSYG 106

Query: 197 AWYH 208
           AW+H
Sbjct: 107 AWHH 110


>emb|CAN68129.1| hypothetical protein VITISV_043707 [Vitis vinifera]
          Length = 542

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +2

Query: 20  ICSKLLKLNPEFYIGWNYRKLVFEHTL-HGETDREYVKSIVTEELELVKTALIKNTKSYG 196
           I +KLL+ NPE Y  WNYRKL  EH L H E+D + VKSI +EEL +V+ +L +N KSYG
Sbjct: 47  ISAKLLEANPESYTAWNYRKLAVEHNLSHSESDPDTVKSIFSEELRVVENSLKQNFKSYG 106

Query: 197 AWYH 208
           AW+H
Sbjct: 107 AWHH 110


>gb|AFW68993.1| rab geranylgeranyl transferase like protein [Zea mays]
          Length = 693

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/60 (56%), Positives = 44/60 (73%)
 Frame = +2

Query: 29  KLLKLNPEFYIGWNYRKLVFEHTLHGETDREYVKSIVTEELELVKTALIKNTKSYGAWYH 208
           KLL++NPE Y  WNYRKL F+H +   +D E +KS V +EL +V+ AL +N KSYGAWYH
Sbjct: 50  KLLEINPEAYTAWNYRKLAFQHNVKELSDPEAIKSAVDDELRVVEVALRQNPKSYGAWYH 109


>ref|XP_003563406.1| PREDICTED: uncharacterized protein LOC100838450 [Brachypodium
           distachyon]
          Length = 696

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/60 (58%), Positives = 43/60 (71%)
 Frame = +2

Query: 29  KLLKLNPEFYIGWNYRKLVFEHTLHGETDREYVKSIVTEELELVKTALIKNTKSYGAWYH 208
           KLL++NPE Y  WNYRKL  +H L   TD E +KS V +EL +V+ AL +N KSYGAWYH
Sbjct: 50  KLLEINPEAYTAWNYRKLALQHNLRELTDPEAIKSSVDDELRVVEIALRQNPKSYGAWYH 109


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