BLASTX nr result

ID: Coptis24_contig00000884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000884
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform...   198   4e-49
ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis ...   197   1e-48
gb|AAT68777.1| QM-like protein [Camellia sinensis]                    197   1e-48
sp|Q9SPB3.1|RL10_VITRI RecName: Full=60S ribosomal protein L10; ...   197   1e-48
sp|Q9M5M7.1|RL10_EUPES RecName: Full=60S ribosomal protein L10 g...   196   1e-48

>ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform 2 [Vitis vinifera]
           gi|225425354|ref|XP_002275270.1| PREDICTED: 60S
           ribosomal protein L10 isoform 1 [Vitis vinifera]
          Length = 224

 Score =  198 bits (503), Expect = 4e-49
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = -3

Query: 276 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 97
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 96  SSEALEAARIACNKYMTKFAGKDAFHLRVRVH 1
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVH
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVH 92


>ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis vinifera]
           gi|297745742|emb|CBI15798.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = -3

Query: 276 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 97
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 96  SSEALEAARIACNKYMTKFAGKDAFHLRVRVH 1
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVH
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVH 92


>gb|AAT68777.1| QM-like protein [Camellia sinensis]
          Length = 216

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = -3

Query: 276 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 97
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 96  SSEALEAARIACNKYMTKFAGKDAFHLRVRVH 1
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVH
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVH 92


>sp|Q9SPB3.1|RL10_VITRI RecName: Full=60S ribosomal protein L10; AltName: Full=QM protein
           homolog gi|5917743|gb|AAD56018.1|AF180758_1 60S
           ribosomal protein L10 [Vitis riparia]
          Length = 220

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = -3

Query: 276 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 97
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 96  SSEALEAARIACNKYMTKFAGKDAFHLRVRVH 1
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVH
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVH 92


>sp|Q9M5M7.1|RL10_EUPES RecName: Full=60S ribosomal protein L10
           gi|6984130|gb|AAF34765.1|AF227620_1 60S ribosomal
           protein L10 [Euphorbia esula]
          Length = 220

 Score =  196 bits (499), Expect = 1e-48
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = -3

Query: 276 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 97
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 96  SSEALEAARIACNKYMTKFAGKDAFHLRVRVH 1
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVH
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVH 92


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