BLASTX nr result

ID: Coptis24_contig00000819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000819
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523907.1| eukaryotic translation elongation factor, pu...   437   e-121
gb|AET97562.1| elongation factor [Ziziphus jujuba]                    436   e-120
dbj|BAB86847.1| elongation factor EF-2 [Pisum sativum]                434   e-120
ref|XP_002266780.1| PREDICTED: elongation factor 2-like isoform ...   433   e-119
ref|XP_003569442.1| PREDICTED: elongation factor 2-like [Brachyp...   432   e-119

>ref|XP_002523907.1| eukaryotic translation elongation factor, putative [Ricinus
           communis] gi|223536837|gb|EEF38476.1| eukaryotic
           translation elongation factor, putative [Ricinus
           communis]
          Length = 843

 Score =  437 bits (1124), Expect = e-121
 Identities = 211/220 (95%), Positives = 216/220 (98%)
 Frame = +1

Query: 1   VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED 180
           VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTF RVIENANVIMATYED
Sbjct: 135 VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYED 194

Query: 181 PLLGDVMVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT 360
           PLLGD  VYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT
Sbjct: 195 PLLGDCQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT 254

Query: 361 KKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLG 540
           KKWT+KNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPML+KLGVTMKSDEKEL+G
Sbjct: 255 KKWTSKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKELMG 314

Query: 541 KALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENL 660
           KALMKRVMQTWLPAS+ALLEMMI HLPSP+KAQRYRVENL
Sbjct: 315 KALMKRVMQTWLPASSALLEMMIFHLPSPAKAQRYRVENL 354


>gb|AET97562.1| elongation factor [Ziziphus jujuba]
          Length = 843

 Score =  436 bits (1120), Expect = e-120
 Identities = 210/220 (95%), Positives = 215/220 (97%)
 Frame = +1

Query: 1   VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED 180
           VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED
Sbjct: 135 VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED 194

Query: 181 PLLGDVMVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT 360
           PLLGDV VYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT
Sbjct: 195 PLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT 254

Query: 361 KKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLG 540
           KKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPML+KLG TMKS+EK+L+G
Sbjct: 255 KKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGCTMKSEEKDLMG 314

Query: 541 KALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENL 660
           KALMKRVMQTWLPAS ALLEMMI HLP PSKAQ+YRVENL
Sbjct: 315 KALMKRVMQTWLPASNALLEMMIFHLPPPSKAQKYRVENL 354


>dbj|BAB86847.1| elongation factor EF-2 [Pisum sativum]
          Length = 493

 Score =  434 bits (1117), Expect = e-120
 Identities = 211/220 (95%), Positives = 214/220 (97%)
 Frame = +1

Query: 1   VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED 180
           VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED
Sbjct: 68  VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED 127

Query: 181 PLLGDVMVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT 360
           PLLGDV VYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT
Sbjct: 128 PLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT 187

Query: 361 KKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLG 540
           KKWTTKNTGS +CKRGFVQFCYEPIKQIINTCMNDQKDKLWPML KLGVTMKSDEK+L+G
Sbjct: 188 KKWTTKNTGSASCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLTKLGVTMKSDEKDLMG 247

Query: 541 KALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENL 660
           K LMKRVMQTWLPASTALLEMMI HLPSPS AQRYRVENL
Sbjct: 248 KPLMKRVMQTWLPASTALLEMMIFHLPSPSTAQRYRVENL 287


>ref|XP_002266780.1| PREDICTED: elongation factor 2-like isoform 1 [Vitis vinifera]
           gi|359494453|ref|XP_003634783.1| PREDICTED: elongation
           factor 2-like isoform 2 [Vitis vinifera]
          Length = 843

 Score =  433 bits (1114), Expect = e-119
 Identities = 208/220 (94%), Positives = 215/220 (97%)
 Frame = +1

Query: 1   VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED 180
           VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTF RVIENANVIMATYED
Sbjct: 135 VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYED 194

Query: 181 PLLGDVMVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT 360
           PLLGDV VYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDP+T
Sbjct: 195 PLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPST 254

Query: 361 KKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLG 540
           +KWTTKNTG+P CKRGFVQFCYEPIKQIINTCMNDQKDKLWPML+KLGVTMKSDEK+L+G
Sbjct: 255 RKWTTKNTGAPNCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKDLMG 314

Query: 541 KALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENL 660
           KALMKRVMQTWLPASTALLEMMI HLPSPS AQ+YRVENL
Sbjct: 315 KALMKRVMQTWLPASTALLEMMIFHLPSPSTAQKYRVENL 354


>ref|XP_003569442.1| PREDICTED: elongation factor 2-like [Brachypodium distachyon]
          Length = 843

 Score =  432 bits (1111), Expect = e-119
 Identities = 208/220 (94%), Positives = 215/220 (97%)
 Frame = +1

Query: 1   VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYED 180
           VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQV+GEEAYQTF RVIENANVIMATYED
Sbjct: 135 VCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRVIENANVIMATYED 194

Query: 181 PLLGDVMVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPAT 360
            LLGDV VYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDP T
Sbjct: 195 ALLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPTT 254

Query: 361 KKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLG 540
           KKWT+KNTGSPTCKRGFVQFCY+PIKQIINTCMNDQKDKLWPML+KLGVTMK+DEKEL+G
Sbjct: 255 KKWTSKNTGSPTCKRGFVQFCYDPIKQIINTCMNDQKDKLWPMLQKLGVTMKTDEKELMG 314

Query: 541 KALMKRVMQTWLPASTALLEMMIHHLPSPSKAQRYRVENL 660
           KALMKRVMQTWLPASTALLEMMI HLPSPSKAQ+YRVENL
Sbjct: 315 KALMKRVMQTWLPASTALLEMMIFHLPSPSKAQKYRVENL 354


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