BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000784
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   399   e-109
ref|XP_002300622.1| chromatin remodeling complex subunit [Populu...   370   e-100
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   368   2e-99
ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   363   8e-98
ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   362   1e-97

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
            gi|297745602|emb|CBI40767.3| unnamed protein product
            [Vitis vinifera]
          Length = 492

 Score =  399 bits (1026), Expect = e-109
 Identities = 220/461 (47%), Positives = 281/461 (60%), Gaps = 22/461 (4%)
 Frame = +2

Query: 101  MATVSPIKEQV------------TPTPVLPTNKNKETANSSDSKL-----QDSSNDVITI 229
            MA  SPIK+ +            + + ++PT K++    +S S       + S  + I I
Sbjct: 1    MAAQSPIKDPIGASTETLTQQPDSSSSIIPTVKSEIPVAASASPSVGIVPRASEPETINI 60

Query: 230  PSHSRWFSWDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQV 409
            PS+SRWFSW+ VHECE R LPEFF+ R P KNP+VY Y RNSII  FR++PSRK+TFT V
Sbjct: 61   PSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSRKLTFTDV 120

Query: 410  RKVLVGDVGSTRRVFDFLEGWGLINYTGAVQKSHSKLDDKENKXXXXXXXXXXXX----K 577
            RK+LVGDVGS RRVFDFLE WGLINY+G+  K   K ++K+NK                +
Sbjct: 121  RKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKSGGASSHTGDAGGGAVE 180

Query: 578  KETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNMSE 757
                +R+CS CK++CSIACF  DK D TLCARC+VRG YR+G +++DFRRVEISE   + 
Sbjct: 181  SIPKRRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVNSSDFRRVEISEDTKAG 240

Query: 758  WTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFVKLPFAEQFISRPDSLAV-VE 934
            WTDKETL+LLEAV HYGDDWKKVAEHVGGR EKECV  F+KL F EQ++    S  V  +
Sbjct: 241  WTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKLSFGEQYLGHTSSGDVDNK 300

Query: 935  YQQTRTPSEAETGEDNSISSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXXX 1114
            + Q +  S+A  G++N  +SS +KK RLTP SD SNPIMAQ AFLSA+            
Sbjct: 301  FSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQAAFLSALVGVEVAEAAARA 360

Query: 1115 XXXXLSDTNLPTDQRRIERRSNSLPEKRDQYESASGANGSDDMNRLXXXXXXXXXXXXXX 1294
                LSD     D R+++    S        +    +NG+   N L              
Sbjct: 361  AVASLSD----VDPRKMKEGLGSFANGARIQDPNVESNGNTTSNVLEGAYVDAKSLLERE 416

Query: 1295 XXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQLQ 1417
                 R+I+ I  VQMK+++DKI  FEE EL +EKEW+QLQ
Sbjct: 417  ELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQ 457


>ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222842348|gb|EEE79895.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 500

 Score =  370 bits (951), Expect = e-100
 Identities = 208/461 (45%), Positives = 269/461 (58%), Gaps = 23/461 (4%)
 Frame = +2

Query: 101  MATVSPIKEQVTP-----TPVLPTNKNKETANSSDSKLQ----DSSNDVITIPSHSRWFS 253
            MA+VSP    + P     + V P  +   TA  S    Q     S  DV+ IPS+SRWFS
Sbjct: 1    MASVSPAPPSLHPKIPLSSTVKPEIQPPTTAAPSPRPPQPPPPSSEPDVVHIPSYSRWFS 60

Query: 254  WDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQVRKVLVGDV 433
            WD +HECE R LPEFF+ R P KNP VY Y RNSII  FRK+PS K+TFT++RK LVGDV
Sbjct: 61   WDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIRKTLVGDV 120

Query: 434  GSTRRVFDFLEGWGLINYTGAVQKSHSKLDDKENK-------------XXXXXXXXXXXX 574
            GS RRVFDFL+ WGLINY+  + K     D K++                          
Sbjct: 121  GSIRRVFDFLDAWGLINYS-PLNKQLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASN 179

Query: 575  KKETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNMS 754
             K+  KR CS CK++CSIACF  DK D TLCARC+VRG YR+G S++DFRRVEISE+  +
Sbjct: 180  TKDNCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEART 239

Query: 755  EWTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFVKLPFAEQFISRPDSLAV-V 931
            +WT+KETL LLEAV HY DDWKKVA+HVGGR+EK+C+  F+KLPF E F    D   V  
Sbjct: 240  DWTEKETLQLLEAVMHYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGDVDS 299

Query: 932  EYQQTRTPSEAETGEDNSISSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXX 1111
            +Y Q +   + E+G + + S S +KK RL+P  D SNPIMAQ AFLSA+           
Sbjct: 300  KYNQIKDCDDDESGRNGNGSPSTSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAAR 359

Query: 1112 XXXXXLSDTNLPTDQRRIERRSNSLPEKRDQYESASGANGSDDMNRLXXXXXXXXXXXXX 1291
                 L++      +  +E     +       +S   +NG  +++               
Sbjct: 360  AAVTTLTEVEYGGSKGSLE----FVSRVTKHLDSGVASNGDTNLSASVKACLDANSLLEK 415

Query: 1292 XXXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQL 1414
                  R+I+ I  VQMK++QDKI +FEE++LQ+EKEW+QL
Sbjct: 416  EESDVERAISRITEVQMKEIQDKILRFEELDLQMEKEWQQL 456


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score =  368 bits (944), Expect = 2e-99
 Identities = 207/444 (46%), Positives = 267/444 (60%), Gaps = 9/444 (2%)
 Frame = +2

Query: 113  SPIKEQVTPTPVLPTNKNKETANSSDSKLQDSSNDVITIPSHSRWFSWDKVHECERRSLP 292
            +P   +  P PV   +  K  A  SDSK    +N VI +PS+SRWFSWD + ECE R LP
Sbjct: 18   APPPPKQPPQPVAAASAVKPEAPLSDSKASAEAN-VIVVPSYSRWFSWDSIDECEVRHLP 76

Query: 293  EFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQVRKVLVGDVGSTRRVFDFLEGW 472
            EFFE     K+P+VY Y RNSI+K FR +P+RKITFT VRK LVGDVGS RRVFDFLE W
Sbjct: 77   EFFESAS--KSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSIRRVFDFLETW 134

Query: 473  GLINYTGAVQKSHS-KLDDKENKXXXXXXXXXXXXK--KETSKRFCSLCKTVCSIACFVS 643
            GLINY  +   +   K DDKE K               KE +KR CS CK VC+IACF  
Sbjct: 135  GLINYHPSSSLTKPLKWDDKETKSDSASNTTESSSAPAKENTKRLCSGCKVVCTIACFAC 194

Query: 644  DKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNMSEWTDKETLNLLEAVTHYGDDWKK 823
            DK D TLCARC+VRG YR+G +++DFRRVEISE+  ++W +KET NLLEA+THY DDWK+
Sbjct: 195  DKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDWKR 254

Query: 824  VAEHVGGRTEKECVARFVKLPFAEQFISRPDSLAVVEYQQTRTP------SEAETGEDNS 985
            V++HV GRTEKECVA F+KLPF +QF       AV     +  P      ++AE+  D  
Sbjct: 255  VSQHVPGRTEKECVAHFLKLPFVDQFQHYQQHPAVNGTDDSCNPLKRVTNADAESELDTV 314

Query: 986  ISSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQRRI 1165
             S+ P K+ RLTP +D SNPIMAQ AFLSA+                LS+    T   +I
Sbjct: 315  ASAEPNKRMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAALTTLSEVYKAT---KI 371

Query: 1166 ERRSNSLPEKRDQYESASGANGSDDMNRLXXXXXXXXXXXXXXXXXXXRSITDILGVQMK 1345
              R  S P      ++   +NG +  +                     ++I++I+ VQMK
Sbjct: 372  NYR--SFPRNTLLQDAGIMSNGGNTSDSFQGSRLHANIQLEKEELDVEKAISEIIEVQMK 429

Query: 1346 DLQDKIFQFEEIELQVEKEWEQLQ 1417
            ++QDK+ QFE+++L +EKE +QL+
Sbjct: 430  NIQDKLVQFEDLDLLMEKEGQQLE 453


>ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 493

 Score =  363 bits (931), Expect = 8e-98
 Identities = 212/479 (44%), Positives = 280/479 (58%), Gaps = 41/479 (8%)
 Frame = +2

Query: 101  MATVSPIKEQVT----------PTPVLPTNKNKETANSSDSKL----------------Q 202
            MA  SP+++  T          P+P L T   K     SDS                  Q
Sbjct: 1    MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQ 60

Query: 203  DSSNDVITIPSHSRWFSWDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHP 382
             +S D I +PS+SRWFSW+ +HECE R LPEFF+ R P KNP+VY Y+RNSI+K FR+ P
Sbjct: 61   STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 120

Query: 383  SRKITFTQVRKVLVGDVGSTRRVFDFLEGWGLINYTGAVQKSHSKLDDKENKXXXXXXXX 562
            S+KITFT +RK LV DVGS RRVFDFLE WGLINY+ +      K DD+++K        
Sbjct: 121  SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 180

Query: 563  XXXX--------KKETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNND 718
                         K+ SKR CS CK++CSIACF  DK D TLCARC+VRG YR+G S++D
Sbjct: 181  GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 240

Query: 719  FRRVEISEQNMSEWTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFVKLPFAEQ 898
            FRRVEI++   ++WTDKETL+LLEA+THYGDDWKKVA+HVGGRTE+ECVA+FVKLP  EQ
Sbjct: 241  FRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQ 300

Query: 899  FISRPDSLAV-----VEYQQTRTPSEAETGEDNSISSSPAKKTRLTPFSDTSNPIMAQVA 1063
            F   PDS  +     V+ + +   +   TG+    +S P K+ RL+P +D SNPIMAQ A
Sbjct: 301  FHGYPDSEHIDNNCTVKDEASANLTLESTGKIG--TSIPNKRIRLSPLADASNPIMAQAA 358

Query: 1064 FLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQRRIERRSNSLPEKRDQYESASGA--NGSD 1237
            FLS++                LS+ +   D         ++P  R+  E  + A  +G  
Sbjct: 359  FLSSLVGVEVAEAAAQAAVIKLSEMDFGGD------GEIAIPVARNIGEQGNDAASHGGS 412

Query: 1238 DMNRLXXXXXXXXXXXXXXXXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQL 1414
             ++R                    ++I+ I+ VQMK++ DK+  FEE ELQ+EK ++QL
Sbjct: 413  CLSR-------------GSTMDMEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVFKQL 458


>ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 555

 Score =  362 bits (929), Expect = 1e-97
 Identities = 212/479 (44%), Positives = 278/479 (58%), Gaps = 41/479 (8%)
 Frame = +2

Query: 101  MATVSPIKEQVT----------PTPVLPTNKNKETANSSDSKL----------------Q 202
            MA  SP+++  T          P+P L T   K     SDS                  Q
Sbjct: 63   MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQ 122

Query: 203  DSSNDVITIPSHSRWFSWDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHP 382
             +S D I +PS+SRWFSW+ +HECE R LPEFF+ R P KNP+VY Y+RNSI+K FR+ P
Sbjct: 123  STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 182

Query: 383  SRKITFTQVRKVLVGDVGSTRRVFDFLEGWGLINYTGAVQKSHSKLDDKENKXXXXXXXX 562
            S+KITFT +RK LV DVGS RRVFDFLE WGLINY+ +      K DD+++K        
Sbjct: 183  SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 242

Query: 563  XXXX--------KKETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNND 718
                         K+ SKR CS CK++CSIACF  DK D TLCARC+VRG YR+G S++D
Sbjct: 243  GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 302

Query: 719  FRRVEISEQNMSEWTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFVKLPFAEQ 898
            FRRVEI++   ++WTDKETL+LLEA+THYGDDWKKVA+HVGGRTE+ECVA+FVKLP  EQ
Sbjct: 303  FRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQ 362

Query: 899  FISRPDSLAVVEYQQTRTPSEA-----ETGEDNSISSSPAKKTRLTPFSDTSNPIMAQVA 1063
            F   PDS  +      +  + A      TG+    +S P K+ RL+P +D SNPIMAQ A
Sbjct: 363  FHGYPDSEHIDNNCTVKDEASANLMLESTGKIG--TSIPNKRIRLSPLADASNPIMAQAA 420

Query: 1064 FLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQRRIERRSNSLPEKRDQYESASGA--NGSD 1237
            FLS++                LS+ +   D         ++P  R+  E  + A  +G  
Sbjct: 421  FLSSLVGVEVAEAAAQAAVIKLSEMDFGGD------GEIAIPVARNIGEQGNDAASHGGS 474

Query: 1238 DMNRLXXXXXXXXXXXXXXXXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQL 1414
             ++R                    ++I+ I+ VQMK++ DK+  FEE ELQ+EK ++QL
Sbjct: 475  CLSR-------------GSTMDMEKAISHIVDVQMKEIVDKLNGFEEGELQMEKVFKQL 520