BLASTX nr result

ID: Coptis24_contig00000781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000781
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|2...   249   6e-64
ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251...   247   3e-63
ref|XP_002527246.1| conserved hypothetical protein [Ricinus comm...   223   6e-56
ref|XP_002263900.1| PREDICTED: uncharacterized protein LOC100253...   217   3e-54
ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subs...   213   5e-53

>ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|222843547|gb|EEE81094.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  249 bits (637), Expect = 6e-64
 Identities = 122/165 (73%), Positives = 142/165 (86%)
 Frame = -3

Query: 769 PNLSNSTRTLATIFALGITLSKLFSQAIKNLSLKICRSPTSEEVLALQKLQGNLVCAIGP 590
           P L  STRT+ATI  L ++LS++F  +I+   L     PT ++++A++ LQ NLV ++GP
Sbjct: 85  PQLIGSTRTVATILTLALSLSRIFVTSIQKFVLSHNLFPTPDQLVAIRALQSNLVHSVGP 144

Query: 589 LFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRD 410
            FFAAL+DRP+G LNTPLTVVAAG++KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRD
Sbjct: 145 FFFAALKDRPTGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRD 204

Query: 409 LCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSRGAY 275
           LCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILN+SRG Y
Sbjct: 205 LCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNSSRGMY 249


>ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251416 [Vitis vinifera]
           gi|296089606|emb|CBI39425.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  247 bits (631), Expect = 3e-63
 Identities = 123/171 (71%), Positives = 146/171 (85%), Gaps = 3/171 (1%)
 Frame = -3

Query: 778 PFSPNLSNSTRTLATIFALGITLSKLFSQAIKNLSLKICR---SPTSEEVLALQKLQGNL 608
           P +P  ++STRT++ I A  + +SK+F   I+++ L + +   +P  EE+ A++ L+ ++
Sbjct: 64  PTTP-FTDSTRTVSAILASALAVSKVFIAKIQDIFLNLKQIDFTPNPEELAAIRDLRSSV 122

Query: 607 VCAIGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPWDRQP 428
           VCA+GPLFFAA RDRPSG LNTPLTVVAAGM+KWLDIYSGVLMVRVLLSWFPNIPWDRQP
Sbjct: 123 VCAVGPLFFAAARDRPSGYLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPWDRQP 182

Query: 427 LSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSRGAY 275
           LSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSILNNSRG Y
Sbjct: 183 LSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRGMY 233


>ref|XP_002527246.1| conserved hypothetical protein [Ricinus communis]
           gi|223533339|gb|EEF35090.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  223 bits (568), Expect = 6e-56
 Identities = 118/163 (72%), Positives = 130/163 (79%)
 Frame = -3

Query: 763 LSNSTRTLATIFALGITLSKLFSQAIKNLSLKICRSPTSEEVLALQKLQGNLVCAIGPLF 584
           L++STRT+ TI AL  +LS+LF   I  L             LALQ    NL  ++GPLF
Sbjct: 76  LTDSTRTVTTILALAFSLSRLFLNQISFLPK-----------LALQNTT-NLTHSVGPLF 123

Query: 583 FAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLC 404
           FAA+RDRPSG LNTPLTVVAAG++KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLC
Sbjct: 124 FAAIRDRPSGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLC 183

Query: 403 DPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSRGAY 275
           DPYLNLFRNIIPPIFDTLDVSPLLAFAVLG LGSIL++S   Y
Sbjct: 184 DPYLNLFRNIIPPIFDTLDVSPLLAFAVLGMLGSILSSSGAGY 226


>ref|XP_002263900.1| PREDICTED: uncharacterized protein LOC100253131 [Vitis vinifera]
           gi|296083067|emb|CBI22471.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score =  217 bits (553), Expect = 3e-54
 Identities = 106/148 (71%), Positives = 122/148 (82%)
 Frame = -3

Query: 718 ITLSKLFSQAIKNLSLKICRSPTSEEVLALQKLQGNLVCAIGPLFFAALRDRPSGSLNTP 539
           + +S+LF   ++   L     P +EEV A++ L+   VCA  PLFFAA+RDRP G LNTP
Sbjct: 53  VEISRLFLTKLQQNFL-----PNAEEVAAIKSLRDTAVCAAAPLFFAAMRDRPRGYLNTP 107

Query: 538 LTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIF 359
           LTVVAAGM+KWLDIYSGVLMVRV+LSWFPNIPW+RQPLSAIRDLCDPYLNLFRNIIPP+F
Sbjct: 108 LTVVAAGMAKWLDIYSGVLMVRVMLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVF 167

Query: 358 DTLDVSPLLAFAVLGTLGSILNNSRGAY 275
           D LD+SPLLAF+VLG LGSILNNS G Y
Sbjct: 168 DALDLSPLLAFSVLGVLGSILNNSMGMY 195


>ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313311|gb|EFH43734.1| YGGT family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 210

 Score =  213 bits (543), Expect = 5e-53
 Identities = 130/239 (54%), Positives = 151/239 (63%), Gaps = 2/239 (0%)
 Frame = -3

Query: 994 LITTSTFILHNPNLTKPSFLNPNLSISRTNLSFPKNTHSFNPLNPLFKLHVXXXXXXXXX 815
           ++T    IL NP L  P  L P LS+               P  P F L +         
Sbjct: 1   MVTLRASILANPRLPPP-ILRPRLSL---------------PRKPSFNLSLHNPRTIVSS 44

Query: 814 XXXXXXXXXTNNPFSP-NLSNSTRTLATIFALGITLSKLFSQAIKNLSLKICR-SPTSEE 641
                    +  P S    S+STR++ T+  L   ++K     I+ LS+ I   SP    
Sbjct: 45  AVTSLSPVLSTKPPSQFPFSDSTRSITTLALLAGVVTK---SLIQKLSVAIVNISP---- 97

Query: 640 VLALQKLQGNLVCAIGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLS 461
                ++Q ++  A  PLFFA+LRDRP+G LNTPLTVVAAG+SKWLDIYSGVLMVRVLLS
Sbjct: 98  -----QIQASIRTA-SPLFFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLS 151

Query: 460 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSR 284
           WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSILNNSR
Sbjct: 152 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSR 210


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