BLASTX nr result
ID: Coptis24_contig00000781
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000781 (1035 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|2... 249 6e-64 ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251... 247 3e-63 ref|XP_002527246.1| conserved hypothetical protein [Ricinus comm... 223 6e-56 ref|XP_002263900.1| PREDICTED: uncharacterized protein LOC100253... 217 3e-54 ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subs... 213 5e-53 >ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|222843547|gb|EEE81094.1| predicted protein [Populus trichocarpa] Length = 249 Score = 249 bits (637), Expect = 6e-64 Identities = 122/165 (73%), Positives = 142/165 (86%) Frame = -3 Query: 769 PNLSNSTRTLATIFALGITLSKLFSQAIKNLSLKICRSPTSEEVLALQKLQGNLVCAIGP 590 P L STRT+ATI L ++LS++F +I+ L PT ++++A++ LQ NLV ++GP Sbjct: 85 PQLIGSTRTVATILTLALSLSRIFVTSIQKFVLSHNLFPTPDQLVAIRALQSNLVHSVGP 144 Query: 589 LFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRD 410 FFAAL+DRP+G LNTPLTVVAAG++KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRD Sbjct: 145 FFFAALKDRPTGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRD 204 Query: 409 LCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSRGAY 275 LCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILN+SRG Y Sbjct: 205 LCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNSSRGMY 249 >ref|XP_002265251.1| PREDICTED: uncharacterized protein LOC100251416 [Vitis vinifera] gi|296089606|emb|CBI39425.3| unnamed protein product [Vitis vinifera] Length = 233 Score = 247 bits (631), Expect = 3e-63 Identities = 123/171 (71%), Positives = 146/171 (85%), Gaps = 3/171 (1%) Frame = -3 Query: 778 PFSPNLSNSTRTLATIFALGITLSKLFSQAIKNLSLKICR---SPTSEEVLALQKLQGNL 608 P +P ++STRT++ I A + +SK+F I+++ L + + +P EE+ A++ L+ ++ Sbjct: 64 PTTP-FTDSTRTVSAILASALAVSKVFIAKIQDIFLNLKQIDFTPNPEELAAIRDLRSSV 122 Query: 607 VCAIGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPWDRQP 428 VCA+GPLFFAA RDRPSG LNTPLTVVAAGM+KWLDIYSGVLMVRVLLSWFPNIPWDRQP Sbjct: 123 VCAVGPLFFAAARDRPSGYLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPWDRQP 182 Query: 427 LSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSRGAY 275 LSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSILNNSRG Y Sbjct: 183 LSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRGMY 233 >ref|XP_002527246.1| conserved hypothetical protein [Ricinus communis] gi|223533339|gb|EEF35090.1| conserved hypothetical protein [Ricinus communis] Length = 226 Score = 223 bits (568), Expect = 6e-56 Identities = 118/163 (72%), Positives = 130/163 (79%) Frame = -3 Query: 763 LSNSTRTLATIFALGITLSKLFSQAIKNLSLKICRSPTSEEVLALQKLQGNLVCAIGPLF 584 L++STRT+ TI AL +LS+LF I L LALQ NL ++GPLF Sbjct: 76 LTDSTRTVTTILALAFSLSRLFLNQISFLPK-----------LALQNTT-NLTHSVGPLF 123 Query: 583 FAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLC 404 FAA+RDRPSG LNTPLTVVAAG++KWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLC Sbjct: 124 FAAIRDRPSGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLC 183 Query: 403 DPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSRGAY 275 DPYLNLFRNIIPPIFDTLDVSPLLAFAVLG LGSIL++S Y Sbjct: 184 DPYLNLFRNIIPPIFDTLDVSPLLAFAVLGMLGSILSSSGAGY 226 >ref|XP_002263900.1| PREDICTED: uncharacterized protein LOC100253131 [Vitis vinifera] gi|296083067|emb|CBI22471.3| unnamed protein product [Vitis vinifera] Length = 195 Score = 217 bits (553), Expect = 3e-54 Identities = 106/148 (71%), Positives = 122/148 (82%) Frame = -3 Query: 718 ITLSKLFSQAIKNLSLKICRSPTSEEVLALQKLQGNLVCAIGPLFFAALRDRPSGSLNTP 539 + +S+LF ++ L P +EEV A++ L+ VCA PLFFAA+RDRP G LNTP Sbjct: 53 VEISRLFLTKLQQNFL-----PNAEEVAAIKSLRDTAVCAAAPLFFAAMRDRPRGYLNTP 107 Query: 538 LTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIF 359 LTVVAAGM+KWLDIYSGVLMVRV+LSWFPNIPW+RQPLSAIRDLCDPYLNLFRNIIPP+F Sbjct: 108 LTVVAAGMAKWLDIYSGVLMVRVMLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVF 167 Query: 358 DTLDVSPLLAFAVLGTLGSILNNSRGAY 275 D LD+SPLLAF+VLG LGSILNNS G Y Sbjct: 168 DALDLSPLLAFSVLGVLGSILNNSMGMY 195 >ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subsp. lyrata] gi|297313311|gb|EFH43734.1| YGGT family protein [Arabidopsis lyrata subsp. lyrata] Length = 210 Score = 213 bits (543), Expect = 5e-53 Identities = 130/239 (54%), Positives = 151/239 (63%), Gaps = 2/239 (0%) Frame = -3 Query: 994 LITTSTFILHNPNLTKPSFLNPNLSISRTNLSFPKNTHSFNPLNPLFKLHVXXXXXXXXX 815 ++T IL NP L P L P LS+ P P F L + Sbjct: 1 MVTLRASILANPRLPPP-ILRPRLSL---------------PRKPSFNLSLHNPRTIVSS 44 Query: 814 XXXXXXXXXTNNPFSP-NLSNSTRTLATIFALGITLSKLFSQAIKNLSLKICR-SPTSEE 641 + P S S+STR++ T+ L ++K I+ LS+ I SP Sbjct: 45 AVTSLSPVLSTKPPSQFPFSDSTRSITTLALLAGVVTK---SLIQKLSVAIVNISP---- 97 Query: 640 VLALQKLQGNLVCAIGPLFFAALRDRPSGSLNTPLTVVAAGMSKWLDIYSGVLMVRVLLS 461 ++Q ++ A PLFFA+LRDRP+G LNTPLTVVAAG+SKWLDIYSGVLMVRVLLS Sbjct: 98 -----QIQASIRTA-SPLFFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLS 151 Query: 460 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNNSR 284 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLGSILNNSR Sbjct: 152 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSR 210