BLASTX nr result
ID: Coptis24_contig00000761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000761
(1572 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ... 491 e-136
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 491 e-136
ref|NP_001141990.1| uncharacterized protein LOC100274140 [Zea ma... 468 e-129
ref|XP_002440164.1| hypothetical protein SORBIDRAFT_09g027090 [S... 449 e-124
ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa ... 447 e-123
>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
vinifera]
Length = 529
Score = 491 bits (1263), Expect = e-136
Identities = 254/474 (53%), Positives = 335/474 (70%), Gaps = 8/474 (1%)
Frame = -3
Query: 1495 MGWCPHCAKNLETVRGDEGFICCASCGKVVDSDMFTDEPTFIKGAGGQSQLSGRYIRSVE 1316
M WC +CA++ T R G++CC +CGKVVD D F+++P F+K A GQSQ+SG ++++V+
Sbjct: 1 MVWCTNCARDCRTERLLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSGNFVKTVQ 60
Query: 1315 SGNSESREKTLANGRDEISSLVQNLSMTGQEPIINAALSFYKLAVDRNFTRGRKRNLVTA 1136
S S SRE+TL + EI + + ++G + II AL+FY +A++RNFTRGR++ V A
Sbjct: 61 SDYSASRERTLNDAYAEIGHIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAA 120
Query: 1135 SCLYIACREDNRAYLLIDFSNQLCENVYVLGAVFLQLCQLLRLQNHPIMKKLVDPVLFIP 956
+CLYIACRE+ + +LLIDFS L NVYVLGAVFLQLC+LL L+ HPI++K VDP LFI
Sbjct: 121 ACLYIACRENKKPFLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFIH 180
Query: 955 RFTHSXXXXXXXXXXXXXXLGSKTRLFNDIERTARRILASMKRDWMQTGRKPSGLCGAAL 776
RF G + +TA RI+ASMKRDW+QTGRKPSGLCGAAL
Sbjct: 181 RFA----------------AGLPGETNMGVSKTALRIIASMKRDWLQTGRKPSGLCGAAL 224
Query: 775 YISAHSFGLECSKSDVESIVHVCEATLTKRLIEFENTESGNLTIEEFNLKADELEKEPRL 596
YISA S+GL+CSK+D+ IVH+CEATLTKRLIEFENTESG+LTIEEFN+KA+ELEKE
Sbjct: 225 YISALSYGLKCSKTDIVKIVHICEATLTKRLIEFENTESGSLTIEEFNMKAEELEKEYSS 284
Query: 595 IKSSE-------ARELLCKHNESETPHFANGLCKECYDEFVEFSGGLQGGSDPPAFQLAE 437
K S ELLC+H S P FA+GLC+ CY EF++ SGGL+GGS+PPAFQ AE
Sbjct: 285 TKQSNIGSTVPGKGELLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLEGGSEPPAFQRAE 344
Query: 436 RERLAKASAEKSKDSNLCEKEVEEGDPFSQPNPNVNVEKKLDSQRSEGVVNEHQTVEEGV 257
R+R+AKA+AE++ DSN + ++++G S P+ N KL +S G ++ +++EG
Sbjct: 345 RDRMAKAAAEENADSN--QIQLDKGS--SSPDVCGNESSKLAEPKSIGASDKQASIDEGA 400
Query: 256 CGQSIGHEDID-NTGDESESFSDIDDVEVNGYLHDEEEKRLKTKIWESLNWEYL 98
G +D + N GDESES SDIDDVEV+GYLH+E+EK+ K IWE++N EYL
Sbjct: 401 PSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYL 454
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 491 bits (1263), Expect = e-136
Identities = 254/474 (53%), Positives = 335/474 (70%), Gaps = 8/474 (1%)
Frame = -3
Query: 1495 MGWCPHCAKNLETVRGDEGFICCASCGKVVDSDMFTDEPTFIKGAGGQSQLSGRYIRSVE 1316
M WC +CA++ T R G++CC +CGKVVD D F+++P F+K A GQSQ+SG ++++V+
Sbjct: 1 MVWCTNCARDCRTERLLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSGNFVKTVQ 60
Query: 1315 SGNSESREKTLANGRDEISSLVQNLSMTGQEPIINAALSFYKLAVDRNFTRGRKRNLVTA 1136
S S SRE+TL + EI + + ++G + II AL+FY +A++RNFTRGR++ V A
Sbjct: 61 SDYSASRERTLNDAYAEIGHIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAA 120
Query: 1135 SCLYIACREDNRAYLLIDFSNQLCENVYVLGAVFLQLCQLLRLQNHPIMKKLVDPVLFIP 956
+CLYIACRE+ + +LLIDFS L NVYVLGAVFLQLC+LL L+ HPI++K VDP LFI
Sbjct: 121 ACLYIACRENKKPFLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFIH 180
Query: 955 RFTHSXXXXXXXXXXXXXXLGSKTRLFNDIERTARRILASMKRDWMQTGRKPSGLCGAAL 776
RF G + +TA RI+ASMKRDW+QTGRKPSGLCGAAL
Sbjct: 181 RFA----------------AGLPGETNMGVSKTALRIIASMKRDWLQTGRKPSGLCGAAL 224
Query: 775 YISAHSFGLECSKSDVESIVHVCEATLTKRLIEFENTESGNLTIEEFNLKADELEKEPRL 596
YISA S+GL+CSK+D+ IVH+CEATLTKRLIEFENTESG+LTIEEFN+KA+ELEKE
Sbjct: 225 YISALSYGLKCSKTDIVKIVHICEATLTKRLIEFENTESGSLTIEEFNMKAEELEKEYSS 284
Query: 595 IKSSE-------ARELLCKHNESETPHFANGLCKECYDEFVEFSGGLQGGSDPPAFQLAE 437
K S ELLC+H S P FA+GLC+ CY EF++ SGGL+GGS+PPAFQ AE
Sbjct: 285 TKQSNIGSTVPGKGELLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLEGGSEPPAFQRAE 344
Query: 436 RERLAKASAEKSKDSNLCEKEVEEGDPFSQPNPNVNVEKKLDSQRSEGVVNEHQTVEEGV 257
R+R+AKA+AE++ DSN + ++++G S P+ N KL +S G ++ +++EG
Sbjct: 345 RDRMAKAAAEENADSN--QIQLDKGS--SSPDVCGNESSKLAEPKSIGASDKQASIDEGA 400
Query: 256 CGQSIGHEDID-NTGDESESFSDIDDVEVNGYLHDEEEKRLKTKIWESLNWEYL 98
G +D + N GDESES SDIDDVEV+GYLH+E+EK+ K IWE++N EYL
Sbjct: 401 PSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYL 454
>ref|NP_001141990.1| uncharacterized protein LOC100274140 [Zea mays]
gi|194706710|gb|ACF87439.1| unknown [Zea mays]
gi|413946300|gb|AFW78949.1| hypothetical protein
ZEAMMB73_136276 [Zea mays]
Length = 580
Score = 468 bits (1204), Expect = e-129
Identities = 245/475 (51%), Positives = 325/475 (68%), Gaps = 9/475 (1%)
Frame = -3
Query: 1495 MGWCPHCAKNLETVRG-DEGFICCASCGKVVDSDMFTDEPTFIKGAGGQSQLSGRYIRSV 1319
M +C HCA +++ D+G+ICC +CGKV+D +++TDEPTF+K GQS+L+G + S+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTDEPTFVKDNKGQSRLAGSILESI 60
Query: 1318 ESGNSESREKTLANGRDEISSLVQNLSMTGQEPIINAALSFYKLAVDRNFTRGRKRNLVT 1139
ESG S SR++TL GRDEI +V NL ++G E I++ A FY+LA+DRNFTRGR+ V
Sbjct: 61 ESGYSMSRQRTLDKGRDEIRQIVNNLHISGGETIVSKAFRFYELALDRNFTRGRRTTHVA 120
Query: 1138 ASCLYIACREDNRAYLLIDFSNQLCENVYVLGAVFLQLCQLLRLQNHPIMKKLVDPVLFI 959
A+CLYIACR+ +AYLLIDFS+ L +VYVLGAVFLQLCQ+L+L HP+++KLVDP LFI
Sbjct: 121 AACLYIACRQSKKAYLLIDFSDHLQISVYVLGAVFLQLCQVLQLAEHPVVQKLVDPSLFI 180
Query: 958 PRFTHSXXXXXXXXXXXXXXLGSKTRLFNDIERTARRILASMKRDWMQTGRKPSGLCGAA 779
RFT R ND+ TA RI+ASMKRDWMQTGRKPSGLCGAA
Sbjct: 181 HRFTKLLLG----------------RRNNDVSDTALRIVASMKRDWMQTGRKPSGLCGAA 224
Query: 778 LYISAHSFGLECSKSDVESIVHVCEATLTKRLIEFENTESGNLTIEEFNLKADELEKEPR 599
LYI+A S G +K+D+ S+VHVCEATLTKRLIEFENT+SG+LTIEEF ADE +EP
Sbjct: 225 LYIAALSHGCNYTKADIVSVVHVCEATLTKRLIEFENTDSGSLTIEEFLATADESNEEPV 284
Query: 598 LIKSSEARELLCKHNESETPHFANGLCKECYDEFVEFSGGLQGGSDPPAFQLAERERL-- 425
S ++ E+LCKH + HFA+GLC++CY++F + SGGL+GGSDPPAFQ AE++RL
Sbjct: 285 SKHSPKSGEILCKHKDKGFEHFAHGLCEKCYNKFTKLSGGLEGGSDPPAFQRAEKKRLEA 344
Query: 424 ------AKASAEKSKDSNLCEKEVEEGDPFSQPNPNVNVEKKLDSQRSEGVVNEHQTVEE 263
A A+ E + + +LC+ + E + P ++ +K SEG++N+ ++
Sbjct: 345 AKRAEEAAAAKEAALEESLCDTQNSEVESAMTPRKGLSGDKS-SKMGSEGLINDSMPPKD 403
Query: 262 GVCGQSIGHEDIDNTGDESESFSDIDDVEVNGYLHDEEEKRLKTKIWESLNWEYL 98
G E+ + D ES SDIDD EV+GYLH+EEE + K IWE +N EYL
Sbjct: 404 ----PEEGGENCEGNAD-PESLSDIDDAEVDGYLHNEEETQYKKIIWEEMNKEYL 453
>ref|XP_002440164.1| hypothetical protein SORBIDRAFT_09g027090 [Sorghum bicolor]
gi|241945449|gb|EES18594.1| hypothetical protein
SORBIDRAFT_09g027090 [Sorghum bicolor]
Length = 579
Score = 449 bits (1156), Expect = e-124
Identities = 240/476 (50%), Positives = 323/476 (67%), Gaps = 10/476 (2%)
Frame = -3
Query: 1495 MGWCPHCAKNLETVRG-DEGFICCASCGKVVDSDMFTDEPTFIKGAGGQSQLSGRYIRSV 1319
M +C HCA +++ D+G+ICC +CGKV+D +++T+EPTF+KG G+S+L+G + S+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTEEPTFVKGNTGESRLAGSILASI 60
Query: 1318 ESGNSESREKTLANGRDEISSLVQNLSMTGQEPIINAALSFYKLAVDRNFTRGRKRNLVT 1139
ESG S S ++TL G+DEI +V NL+++G E I++ A FY+LAVDRNFTRGR+ V
Sbjct: 61 ESGYSISHQRTLDKGKDEIRQIVNNLNVSGGETIVSKAYRFYELAVDRNFTRGRRTTHVA 120
Query: 1138 ASCLYIACREDNRAYLLIDFSNQLCENVYVLGAVFLQLCQLLRLQNHPIMKKLVDPVLFI 959
A+CLYIACR+ +AYLLIDFS+ L +VYVLGAVFLQLCQ+L L +HP+++KLVDP LFI
Sbjct: 121 AACLYIACRQTKKAYLLIDFSDYLQISVYVLGAVFLQLCQVLLLADHPVVQKLVDPSLFI 180
Query: 958 PRFTHSXXXXXXXXXXXXXXLGSKTRLFNDIERTARRILASMKRDWMQTGRKPSGLCGAA 779
RFTH + N + TA RI+ASMKRDWMQTGRKPSGLCGAA
Sbjct: 181 HRFTHRLLG----------------KRDNAVSDTALRIVASMKRDWMQTGRKPSGLCGAA 224
Query: 778 LYISAHSFGLECSKSDVESIVHVCEATLTKRLIEFENTESGNLTIEEFNLKADELEKEPR 599
LYI+A S G +K+D+ S+VHVCEATLTKRLIEFENT+SG+LTIEEF ADE +EP
Sbjct: 225 LYIAALSHGKNYTKADIVSVVHVCEATLTKRLIEFENTDSGSLTIEEFLATADEYNEEPV 284
Query: 598 LIKSSEARELLCKH-NESETPHFANGLCKECYDEFVEFSGGLQGGSDPPAFQLAERERLA 422
S ++ E+LCKH N+ HFA+GLC++CY++F + SGGL+GG+DPPAFQ AE++RL
Sbjct: 285 PKHSPKSGEILCKHKNKKGFEHFAHGLCEKCYNKFTKLSGGLEGGADPPAFQRAEKKRLE 344
Query: 421 KAS--------AEKSKDSNLCEKEVEEGDPFSQPNPNVNVEKKLDSQRSEGVVNEHQTVE 266
A E + + +LC + E + P ++ K + S ++N+ +
Sbjct: 345 AAKRAEEAATVKEAALEESLCNTQNSEVESTITPRKGLSGHKS-STVGSGELINDSVPPK 403
Query: 265 EGVCGQSIGHEDIDNTGDESESFSDIDDVEVNGYLHDEEEKRLKTKIWESLNWEYL 98
+ G E+ + D SES SDIDD EV+ YLH+EEEK+ K IWE +N EYL
Sbjct: 404 D----PEEGGENCEGNAD-SESLSDIDDAEVDWYLHNEEEKQYKKIIWEEMNKEYL 454
>ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like
[Brachypodium distachyon]
Length = 580
Score = 447 bits (1150), Expect = e-123
Identities = 242/474 (51%), Positives = 317/474 (66%), Gaps = 8/474 (1%)
Frame = -3
Query: 1495 MGWCPHCAKNLETVRG-DEGFICCASCGKVVDSDMFTDEPTFIKGAGGQSQLSGRYIRSV 1319
M +C HCA ++ D+G+ICC +CGKV+D D++ EPTF+K GQSQ +G I S+
Sbjct: 1 MFYCTHCADYCPYIKDPDKGYICCGTCGKVLDQDIYNAEPTFVKDGLGQSQRAGNVISSI 60
Query: 1318 ESGNSESREKTLANGRDEISSLVQNLSMTGQEPIINAALSFYKLAVDRNFTRGRKRNLVT 1139
ESG+S S E+TL GRDEI +V +L + G + II+ A FY LAVD NFTRGR+ V
Sbjct: 61 ESGSSLSHERTLMKGRDEIWQIVTSLHVGGGDTIIDMAHKFYTLAVDHNFTRGRRTTQVA 120
Query: 1138 ASCLYIACREDNRAYLLIDFSNQLCENVYVLGAVFLQLCQLLRLQNHPIMKKLVDPVLFI 959
A+CLYIACR+ +AYLLIDFS+ L +VYVLGAVFLQLCQ+L L HPI++KL+DP LFI
Sbjct: 121 AACLYIACRQSKKAYLLIDFSDYLKISVYVLGAVFLQLCQVLLLAEHPIVQKLIDPSLFI 180
Query: 958 PRFTHSXXXXXXXXXXXXXXLGSKTRLFNDIERTARRILASMKRDWMQTGRKPSGLCGAA 779
RFT + N + TA RI+ASMKRDWMQTGRKPSGLCGAA
Sbjct: 181 HRFTERLLG----------------KRDNAVSDTALRIVASMKRDWMQTGRKPSGLCGAA 224
Query: 778 LYISAHSFGLECSKSDVESIVHVCEATLTKRLIEFENTESGNLTIEEFNLKADELEKEPR 599
LYI+A S G +KSD+ +VH+CEATLTKRLIEFENT+SG+LTIE+F KAD E++P
Sbjct: 225 LYIAALSHGYNYTKSDIVGVVHICEATLTKRLIEFENTDSGSLTIEDFLAKAD--EEQPV 282
Query: 598 LIKSSEARELLCKHNESETPHFANGLCKECYDEFVEFSGGLQGGSDPPAFQLAERERLAK 419
S ++ E+LCKH + +T HFA+GLC++CY++F++ SGGL+GG+DPPAFQ AER+RL
Sbjct: 283 SKPSRKSGEVLCKHKDKDTEHFAHGLCEKCYNKFIKMSGGLEGGADPPAFQRAERQRL-- 340
Query: 418 ASAEKSKDSNLCEKEVEEGDPFSQPNPNVNVEKKLDSQRSEGVVNEHQTV-EEGVCGQSI 242
A K + KE G+ + N +VE + S + + ++ T+ E +I
Sbjct: 341 -EAAKKSEEAAALKEAALGESNCEIQ-NSDVEDNIISLKKGPIGDKSSTIPSEQNANDNI 398
Query: 241 GHEDIDNTGDES------ESFSDIDDVEVNGYLHDEEEKRLKTKIWESLNWEYL 98
+D + G+ S ESFSDIDDVEV+GYLH+EEE K IWE +N EY+
Sbjct: 399 ASKDPEVGGENSKPDADPESFSDIDDVEVDGYLHNEEETHYKKIIWEEMNKEYI 452