BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000646
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum] ...   192   3e-47
ref|XP_004135353.1| PREDICTED: 60S ribosomal protein L3-like [Cu...   191   5e-47
ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis v...   190   9e-47
emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]   190   9e-47
gb|AFB33487.1| hypothetical protein 2_6618_01, partial [Abies al...   189   2e-46

>ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
           gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum
           lycopersicum]
          Length = 389

 Score =  192 bits (487), Expect = 3e-47
 Identities = 88/92 (95%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQES 97
           WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK  QES
Sbjct: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQES 295

Query: 96  HSAMTEFDRTEKDITPIGGFPHYGVVKEDYLL 1
           H+A+TEFDRTEKDITPIGGFPHYGVVKEDYLL
Sbjct: 296 HTALTEFDRTEKDITPIGGFPHYGVVKEDYLL 327


>ref|XP_004135353.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
           gi|449503293|ref|XP_004161930.1| PREDICTED: 60S
           ribosomal protein L3-like [Cucumis sativus]
          Length = 388

 Score =  191 bits (485), Expect = 5e-47
 Identities = 86/92 (93%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQES 97
           WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK  Q+S
Sbjct: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDS 295

Query: 96  HSAMTEFDRTEKDITPIGGFPHYGVVKEDYLL 1
           HSAMTEFDRTEKDITPIGGFPHYG+VKEDYL+
Sbjct: 296 HSAMTEFDRTEKDITPIGGFPHYGIVKEDYLM 327


>ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
           gi|297739519|emb|CBI29701.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score =  190 bits (483), Expect = 9e-47
 Identities = 86/92 (93%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQES 97
           WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK  QES
Sbjct: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQES 295

Query: 96  HSAMTEFDRTEKDITPIGGFPHYGVVKEDYLL 1
           HSAMTEFDRTEKDITP+GGFPHYGVVK+DYLL
Sbjct: 296 HSAMTEFDRTEKDITPMGGFPHYGVVKDDYLL 327


>emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
          Length = 389

 Score =  190 bits (483), Expect = 9e-47
 Identities = 86/92 (93%), Positives = 90/92 (97%)
 Frame = -2

Query: 276 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQES 97
           WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK  QES
Sbjct: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQES 295

Query: 96  HSAMTEFDRTEKDITPIGGFPHYGVVKEDYLL 1
           HSAMTEFDRTEKDITP+GGFPHYGVVK+DYLL
Sbjct: 296 HSAMTEFDRTEKDITPMGGFPHYGVVKDDYLL 327


>gb|AFB33487.1| hypothetical protein 2_6618_01, partial [Abies alba]
           gi|376337864|gb|AFB33488.1| hypothetical protein
           2_6618_01, partial [Abies alba]
           gi|376337866|gb|AFB33489.1| hypothetical protein
           2_6618_01, partial [Abies alba]
          Length = 141

 Score =  189 bits (480), Expect = 2e-46
 Identities = 83/92 (90%), Positives = 91/92 (98%)
 Frame = -2

Query: 276 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQES 97
           WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GKA QES
Sbjct: 32  WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKAGQES 91

Query: 96  HSAMTEFDRTEKDITPIGGFPHYGVVKEDYLL 1
           H+AMTEFDRTEKDITP+GGFPHYG+VK+DY++
Sbjct: 92  HNAMTEFDRTEKDITPMGGFPHYGIVKDDYIM 123