BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000562
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   200   6e-49
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   190   6e-46
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   189   8e-46
gb|EEC69671.1| hypothetical protein OsI_39104 [Oryza sativa Indi...   188   2e-45
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818...   187   3e-45

>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  200 bits (508), Expect = 6e-49
 Identities = 92/116 (79%), Positives = 107/116 (92%)
 Frame = +1

Query: 145 MDPDGKKFGRGPRELTGAVDLINHYKLWAHHEFFCKKSLHLSVSDTHYLHSVVGDTEIRK 324
           MDP+ KKFG GPRELTGAVDLI+H+KL  HHEFFCK+SL LS+SDTHYLH+VVGD+EIRK
Sbjct: 1   MDPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRK 60

Query: 325 GEGMELDQLVQSSMYSRDTNAHIQPFDLDTLREAFQLRETTPVDLPSAEKGTPTIA 492
           G+GM+LDQL+Q++ YSRD+NA IQPFDLD LREAFQL+ETTP+DLP AEKGTPTIA
Sbjct: 61  GDGMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIA 116


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  190 bits (482), Expect = 6e-46
 Identities = 87/116 (75%), Positives = 105/116 (90%)
 Frame = +1

Query: 145 MDPDGKKFGRGPRELTGAVDLINHYKLWAHHEFFCKKSLHLSVSDTHYLHSVVGDTEIRK 324
           MDP+GKKFG GPRELTGAVDLI+H+KL  H+EFFCK+SL +S++DTHYLH+VVGDTEIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 325 GEGMELDQLVQSSMYSRDTNAHIQPFDLDTLREAFQLRETTPVDLPSAEKGTPTIA 492
           G+GM+L+QL+Q++   RDTNA IQPFDLD L+EAFQLRET P+DLP+AEKG PTIA
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIA 116


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  189 bits (481), Expect = 8e-46
 Identities = 90/115 (78%), Positives = 102/115 (88%)
 Frame = +1

Query: 145 MDPDGKKFGRGPRELTGAVDLINHYKLWAHHEFFCKKSLHLSVSDTHYLHSVVGDTEIRK 324
           M+ + KKFGRGPRELTGAVDLI+HYKL  HH+FFCKKSL LS+SDTHYLH+VVGDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 325 GEGMELDQLVQSSMYSRDTNAHIQPFDLDTLREAFQLRETTPVDLPSAEKGTPTI 489
           GEGM+L+QL+Q++ Y R+TNA IQPFD D L EAFQLRET PVDLPSAEKG PTI
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTI 115


>gb|EEC69671.1| hypothetical protein OsI_39104 [Oryza sativa Indica Group]
          Length = 220

 Score =  188 bits (478), Expect = 2e-45
 Identities = 91/116 (78%), Positives = 104/116 (89%)
 Frame = +1

Query: 145 MDPDGKKFGRGPRELTGAVDLINHYKLWAHHEFFCKKSLHLSVSDTHYLHSVVGDTEIRK 324
           MD D KKFG+GPRELTGAVDLI+HYKL AHH+FFCKK L L++SDTHYLH+VVGDTEIRK
Sbjct: 1   MDSDDKKFGKGPRELTGAVDLISHYKLLAHHDFFCKKPLPLAISDTHYLHNVVGDTEIRK 60

Query: 325 GEGMELDQLVQSSMYSRDTNAHIQPFDLDTLREAFQLRETTPVDLPSAEKGTPTIA 492
           GEGMELDQLVQ++ Y RD  A+IQPFD++TL +AFQLRET PVDLPSAEKG PTI+
Sbjct: 61  GEGMELDQLVQNA-YLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEKGIPTIS 115


>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
          Length = 222

 Score =  187 bits (476), Expect = 3e-45
 Identities = 87/116 (75%), Positives = 105/116 (90%)
 Frame = +1

Query: 145 MDPDGKKFGRGPRELTGAVDLINHYKLWAHHEFFCKKSLHLSVSDTHYLHSVVGDTEIRK 324
           MDP+GKKFG GPRELTGAVDLI+H+KL  H+EFFCK+ L +S++DTHYLH+VVGDTEIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60

Query: 325 GEGMELDQLVQSSMYSRDTNAHIQPFDLDTLREAFQLRETTPVDLPSAEKGTPTIA 492
           G+GM+LDQL+Q++ + RDTNA IQPFDLD L+EAFQLRET P+DLP+AEKG PTIA
Sbjct: 61  GDGMQLDQLIQNTSF-RDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIA 115