BLASTX nr result
ID: Coptis24_contig00000556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00000556
(249 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucu... 161 4e-38
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 161 4e-38
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 161 4e-38
gb|ABD61727.1| polyubiquitin [Lupinus albus] 161 4e-38
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 161 4e-38
>ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
Length = 126
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 19 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 78
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 79 IQDKEGIPPDQQRLIFAGKQLE 100
Score = 64.7 bits (156), Expect = 7e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGG 94
AGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 95 AGKQLEDGRTLADYNIQKESTLHLVLRLRGG 125
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 97 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 156
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 157 IQDKEGIPPDQQRLIFAGKQLE 178
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 173 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 232
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 233 IQDKEGIPPDQQRLIFAGKQLE 254
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 249 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 308
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 309 IQDKEGIPPDQQRLIFAGKQLE 330
Score = 77.8 bits (190), Expect = 8e-13
Identities = 51/102 (50%), Positives = 51/102 (50%), Gaps = 51/102 (50%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE-------------------------- 196
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTFRVKSRRLKFCLLALLDSATTIES 60
Query: 197 -------------------------GIPPDQQRLIFAGKQLE 247
GIPPDQQRLIFAGKQLE
Sbjct: 61 SLALRSKKSSERREREKESALSRARGIPPDQQRLIFAGKQLE 102
Score = 64.7 bits (156), Expect = 7e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGG 94
AGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 325 AGKQLEDGRTLADYNIQKESTLHLVLRLRGG 355
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1|
Ubiquitin [Medicago truncatula]
Length = 533
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 46 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 105
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 106 IQDKEGIPPDQQRLIFAGKQLE 127
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 122 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 182 IQDKEGIPPDQQRLIFAGKQLE 203
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 198 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 257
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 258 IQDKEGIPPDQQRLIFAGKQLE 279
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 426 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 485
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 486 IQDKEGIPPDQQRLIFAGKQLE 507
Score = 160 bits (405), Expect = 1e-37
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 350 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 409
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 410 IQDKEGIPPDQQRLIFAGKQLE 431
Score = 159 bits (401), Expect = 3e-37
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 274 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 333
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
I DKEGIPPDQQRLIFAGKQLE
Sbjct: 334 ILDKEGIPPDQQRLIFAGKQLE 355
Score = 101 bits (252), Expect = 5e-20
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +2
Query: 95 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 247
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 51
Score = 64.7 bits (156), Expect = 7e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGG 94
AGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 502 AGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
>gb|ABD61727.1| polyubiquitin [Lupinus albus]
Length = 132
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 4 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 63
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 64 IQDKEGIPPDQQRLIFAGKQLE 85
Score = 105 bits (261), Expect = 5e-21
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 160
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT
Sbjct: 80 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 132
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 6 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 65
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 66 IQDKEGIPPDQQRLIFAGKQLE 87
Score = 161 bits (408), Expect = 4e-38
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK
Sbjct: 82 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 141
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 142 IQDKEGIPPDQQRLIFAGKQLE 163
Score = 160 bits (404), Expect = 1e-37
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK 181
AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK K
Sbjct: 158 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTK 217
Query: 182 IQDKEGIPPDQQRLIFAGKQLE 247
IQDKEGIPPDQQRLIFAGKQLE
Sbjct: 218 IQDKEGIPPDQQRLIFAGKQLE 239
Score = 64.7 bits (156), Expect = 7e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 2 AGKQLEDGRTLADYNIQKESTLHLVLRLRGG 94
AGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 234 AGKQLEDGRTLADYNIQKESTLHLVLRLRGG 264