BLASTX nr result

ID: Coptis24_contig00000550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000550
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...   225   2e-56
gb|ABK95529.1| unknown [Populus trichocarpa]                          225   2e-56
ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   221   3e-55
emb|CBI31616.3| unnamed protein product [Vitis vinifera]              219   1e-54
emb|CBI16056.3| unnamed protein product [Vitis vinifera]              219   1e-54

>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  225 bits (573), Expect = 2e-56
 Identities = 109/137 (79%), Positives = 123/137 (89%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   FKDLAQPPESFVDKPPASETAPPSSGTSKGAYVPPSQRAGADRS-GQDMRRRNDENSVRV 177
           +KDLAQPPE+F+DKPPA+ETA  ++G +KGAYVPPS RAGA+R+ G DMRRRN+ENSVRV
Sbjct: 158 YKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERTVGSDMRRRNEENSVRV 217

Query: 178 TNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGY 357
           TNLSEDTREPDL +LF TFG VSRVY+A DQKTG+SRGFGFVNFV K DAE+AI KLNGY
Sbjct: 218 TNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGY 277

Query: 358 GYDNLILRVEWAAPRTN 408
           GYDNLILRVEWA PRTN
Sbjct: 278 GYDNLILRVEWATPRTN 294



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +2

Query: 1256 GSKPDEGKIAGDLLSNLGKGGGAVLMVCRTCGKRGDHWTAQCP 1384
            G+K DE KIAGD L+ LGKGG AVLMVCRTCGK+GDHWT++CP
Sbjct: 116  GAKADETKIAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCP 157


>gb|ABK95529.1| unknown [Populus trichocarpa]
          Length = 194

 Score =  225 bits (573), Expect = 2e-56
 Identities = 109/137 (79%), Positives = 123/137 (89%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   FKDLAQPPESFVDKPPASETAPPSSGTSKGAYVPPSQRAGADRS-GQDMRRRNDENSVRV 177
           +KDLAQPPE+F+DKPPA+ETA  ++G +KGAYVPPS RAGA+R+ G DMRRRN+ENSVRV
Sbjct: 58  YKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERTVGSDMRRRNEENSVRV 117

Query: 178 TNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGY 357
           TNLSEDTREPDL +LF TFG VSRVY+A DQKTG+SRGFGFVNFV K DAE+AI KLNGY
Sbjct: 118 TNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGY 177

Query: 358 GYDNLILRVEWAAPRTN 408
           GYDNLILRVEWA PRTN
Sbjct: 178 GYDNLILRVEWATPRTN 194



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +2

Query: 1256 GSKPDEGKIAGDLLSNLGKGGGAVLMVCRTCGKRGDHWTAQCP 1384
            G+K DE KIAGD L+ LGKGG AVLMVCRTCGK+GDHWT++CP
Sbjct: 16   GAKADETKIAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCP 57


>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score =  221 bits (563), Expect = 3e-55
 Identities = 108/137 (78%), Positives = 122/137 (89%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   FKDLAQPPESFVDKPPASETAPPSSGTSKGAYVPPSQRAGADRS-GQDMRRRNDENSVRV 177
           +KDLAQPPE+F+DKP A+ETA  +SG +KGAYVPPS RAGA+R+ G DMRRRN+ENSVRV
Sbjct: 157 YKDLAQPPETFIDKPAATETAMAASGATKGAYVPPSMRAGAERTTGSDMRRRNEENSVRV 216

Query: 178 TNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGY 357
           TNLSEDTREPDL +LF TFG VSRVY+A DQKTG+SRGFGFVNFV K DAE+AI KLNGY
Sbjct: 217 TNLSEDTREPDLLELFRTFGHVSRVYVAIDQKTGVSRGFGFVNFVSKEDAERAINKLNGY 276

Query: 358 GYDNLILRVEWAAPRTN 408
           GYDNLILRVEWA PR+N
Sbjct: 277 GYDNLILRVEWATPRSN 293



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = +2

Query: 1256 GSKPDEGKIAGDLLSNLGKGGGAVLMVCRTCGKRGDHWTAQCP 1384
            G+K DE K+AGD L+ LGKGG AVLMVCRTCGK+GDHWT++CP
Sbjct: 115  GTKADEAKMAGDNLAQLGKGG-AVLMVCRTCGKKGDHWTSRCP 156


>emb|CBI31616.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  219 bits (559), Expect = 1e-54
 Identities = 105/136 (77%), Positives = 117/136 (86%)
 Frame = +1

Query: 1   FKDLAQPPESFVDKPPASETAPPSSGTSKGAYVPPSQRAGADRSGQDMRRRNDENSVRVT 180
           +KDLA   ++FVDKPPA+ET   ++GT K AYVPP  R GA+R G DMRRRN+ENSVRVT
Sbjct: 58  YKDLAAQTDAFVDKPPAAETTVATTGTGKAAYVPPGMRPGAERVGSDMRRRNEENSVRVT 117

Query: 181 NLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGYG 360
           NLSEDTREPDL +LF TFGPVSRVY+A DQKTGMSRGFGFVNFV+K DAE+AI KLNGYG
Sbjct: 118 NLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAERAINKLNGYG 177

Query: 361 YDNLILRVEWAAPRTN 408
           YDNLILRVEWA PRTN
Sbjct: 178 YDNLILRVEWATPRTN 193



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = +2

Query: 1256 GSKPDEGKIAGDLLSNLGKGGGAVLMVCRTCGKRGDHWTAQCP 1384
            G+K +E KIAGD L+ LGKGG AVLMVCRTCGK+GDHWT++CP
Sbjct: 16   GTKAEETKIAGDSLAQLGKGG-AVLMVCRTCGKKGDHWTSRCP 57


>emb|CBI16056.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  219 bits (559), Expect = 1e-54
 Identities = 105/136 (77%), Positives = 117/136 (86%)
 Frame = +1

Query: 1   FKDLAQPPESFVDKPPASETAPPSSGTSKGAYVPPSQRAGADRSGQDMRRRNDENSVRVT 180
           +KDLA P E F+DKP ASE    +SG SKG YVPP  RAGA+R+G +MRRRN+ENSVRVT
Sbjct: 58  YKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPGMRAGAERTGTEMRRRNEENSVRVT 117

Query: 181 NLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKGDAEKAIAKLNGYG 360
           NLSEDTREPDL +LF TFGPVSRVY+A DQKTGMSRGFGFVNFV+K DAE+AI KLNGYG
Sbjct: 118 NLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVNFVNKEDAERAINKLNGYG 177

Query: 361 YDNLILRVEWAAPRTN 408
           YDNLILRVEWA PR+N
Sbjct: 178 YDNLILRVEWATPRSN 193



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 32/43 (74%), Positives = 38/43 (88%)
 Frame = +2

Query: 1256 GSKPDEGKIAGDLLSNLGKGGGAVLMVCRTCGKRGDHWTAQCP 1384
            GSK +E K+AGD L+ LGKGG AVLMVCRTCGK+GDHWT++CP
Sbjct: 16   GSKAEESKVAGDSLAQLGKGG-AVLMVCRTCGKKGDHWTSRCP 57