BLASTX nr result

ID: Coptis24_contig00000441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000441
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306076.1| predicted protein [Populus trichocarpa] gi|2...   178   3e-42
ref|XP_003539026.1| PREDICTED: plastid division protein PDV2-lik...   177   3e-42
ref|XP_003541094.1| PREDICTED: plastid division protein PDV2-lik...   177   4e-42
gb|ACU22747.1| unknown [Glycine max]                                  176   1e-41
ref|XP_002519107.1| non-symbiotic hemoglobin, putative [Ricinus ...   172   2e-40

>ref|XP_002306076.1| predicted protein [Populus trichocarpa] gi|222849040|gb|EEE86587.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  178 bits (451), Expect = 3e-42
 Identities = 111/248 (44%), Positives = 143/248 (57%), Gaps = 6/248 (2%)
 Frame = -2

Query: 978 SLTPAGAEEEDETTSLFSIRDXXXXXXXXXXXXXXXXXXQRYEREATLAEIDHSRKILLK 799
           SL+ A   E+DET  L  IRD                  Q YE+E  L+EI+HSRKILL 
Sbjct: 71  SLSEAEEGEDDETERLLLIRDAFESLESQLSNLQALQQQQHYEKEVALSEIEHSRKILLD 130

Query: 798 KIKEYKGGDLEVIHEVSAFASETVEXXXXXXXXXXXXXXXXXXXLDNGYSSSFPSKHNLS 619
           K+KEY+G DLEVI E SAFA ETVE                   L++ Y   FPS  N S
Sbjct: 131 KLKEYRGEDLEVIKEASAFAGETVEHNNDLLLPPYPSRHPQSLVLNSRYLYHFPSTRN-S 189

Query: 618 RNVVNGLLPINKESKLEKEQAQTPARNAFAGFRFFLSVAAKTVVTLVGVVSILSLAGFEP 439
             ++ G    + +   E  QAQT ++N+  G   F+S AAKTV+TLVGV+S+LSLAGF P
Sbjct: 190 NGIIAGEAKRHLDEP-EGNQAQTASKNSRKGLGHFISAAAKTVITLVGVISVLSLAGFGP 248

Query: 438 RV-RRTTGFK----FKIPSFEE-KANTQCPPGKVLVMENGEPRCLVKERVEIPFEPLVAT 277
            + ++    K    F+ P+ EE K   QCPPG++LV+E+GE RC+VK RV +PF  LV  
Sbjct: 249 SIGKKGAPLKVLGLFQQPALEERKEAVQCPPGRILVLEDGEARCVVKGRVAVPFNSLVGK 308

Query: 276 PDVSYGFG 253
           PDV+YG G
Sbjct: 309 PDVNYGSG 316


>ref|XP_003539026.1| PREDICTED: plastid division protein PDV2-like [Glycine max]
          Length = 490

 Score =  177 bits (450), Expect = 3e-42
 Identities = 114/272 (41%), Positives = 155/272 (56%), Gaps = 17/272 (6%)
 Frame = -2

Query: 1017 KITNSISDKATTKSLTPAGAEEEDE--TTSLFSIRDXXXXXXXXXXXXXXXXXXQRYERE 844
            KI+N I  +AT    +P   +++D+  T  L +I D                  QRYERE
Sbjct: 19   KISNCIQ-RATANGPSPHADDDDDDEATERLLNICDALEALETQLSSLQVLQQQQRYERE 77

Query: 843  ATLAEIDHSRKILLKKIKEYKGGDLEVIHEVSAFASETVEXXXXXXXXXXXXXXXXXXXL 664
              LAEI+ SRK+L+ K+KEYKG +LEVI E S FASETVE                   +
Sbjct: 78   IALAEIESSRKMLIDKLKEYKGKELEVIQEASTFASETVEPNNDLLLPPYPSRPPYSVSM 137

Query: 663  DNGYSSSFPSKHNLSRNVVNGLLPINKESK--LEKEQ--AQTPARNAFAGFRFFLSVAAK 496
            D  Y S  PS +   RN +  L P+ + +K   EKEQ   +  A+N+  G  FF++ AAK
Sbjct: 138  DKEYLSQIPSVNKSGRNGLITLDPMIEANKNLSEKEQNHVENGAKNSRKGLGFFITSAAK 197

Query: 495  TVVTLVGVVSILSLAGFEPRVR---RTTGFKFKIPSFE--------EKANTQCPPGKVLV 349
             ++T+VGVVSILSL+GF P++       G++ ++ + E        E+ N QCPPG++LV
Sbjct: 198  AMLTVVGVVSILSLSGFGPKLGVRFSVQGWRHRVENEERSTTKNGGERPNIQCPPGRILV 257

Query: 348  MENGEPRCLVKERVEIPFEPLVATPDVSYGFG 253
             ENGE RCLVKERVEIPF  + ATPD++YG G
Sbjct: 258  WENGEARCLVKERVEIPFSAVAATPDINYGCG 289


>ref|XP_003541094.1| PREDICTED: plastid division protein PDV2-like [Glycine max]
          Length = 287

 Score =  177 bits (449), Expect = 4e-42
 Identities = 111/274 (40%), Positives = 154/274 (56%), Gaps = 19/274 (6%)
 Frame = -2

Query: 1017 KITNSISDKATTKSLTPAGAEEEDETTS-LFSIRDXXXXXXXXXXXXXXXXXXQRYEREA 841
            KI+N I  +AT+   +P   +++DE T  L +I D                  Q+YERE 
Sbjct: 19   KISNCIQ-RATSNGPSPHADDDDDEATERLLNICDALEALETQLSSLQVLQQQQQYEREI 77

Query: 840  TLAEIDHSRKILLKKIKEYKGGDLEVIHEVSAFASETVEXXXXXXXXXXXXXXXXXXXLD 661
             LAEI+ SRK+L+ K++EYKG +LEVI+E S FASETVE                   +D
Sbjct: 78   ALAEIESSRKMLIDKLREYKGKELEVINEASTFASETVEPNNDLLLPPYPSHPPYSVSMD 137

Query: 660  NGYSSSFPSKHNLSRNVVNGLLPI----NKESKLEKEQAQTPARNAFAGFRFFLSVAAKT 493
              Y S  PS +   RN +  L P+    N  S+ E+   +  A+N+  G  FF++ AAKT
Sbjct: 138  KEYLSQIPSVNKSGRNGLITLDPMIEVSNSLSEKEQNHVENGAKNSRKGLGFFITSAAKT 197

Query: 492  VVTLVGVVSILSLAGFEPRVRRTTGFKFKIPSF--------------EEKANTQCPPGKV 355
            ++T+VGVVSILSL+GF P++    G +F +  +               E++N QCPPG++
Sbjct: 198  MLTVVGVVSILSLSGFVPKL----GTRFSVQGWCHRVENERSTTKNGGERSNIQCPPGRI 253

Query: 354  LVMENGEPRCLVKERVEIPFEPLVATPDVSYGFG 253
            LV ENGE RC VKERVEIPF  + ATPD++YG G
Sbjct: 254  LVWENGEARCQVKERVEIPFSAVAATPDINYGCG 287


>gb|ACU22747.1| unknown [Glycine max]
          Length = 289

 Score =  176 bits (445), Expect = 1e-41
 Identities = 113/272 (41%), Positives = 154/272 (56%), Gaps = 17/272 (6%)
 Frame = -2

Query: 1017 KITNSISDKATTKSLTPAGAEEEDE--TTSLFSIRDXXXXXXXXXXXXXXXXXXQRYERE 844
            KI+N I  +AT    +P   +++D+  T  L +I D                  QRYERE
Sbjct: 19   KISNCIQ-RATANGPSPHADDDDDDEATERLLNICDALEALETQLSSLQVLQQQQRYERE 77

Query: 843  ATLAEIDHSRKILLKKIKEYKGGDLEVIHEVSAFASETVEXXXXXXXXXXXXXXXXXXXL 664
              LAE + SRK+L+ K+KEYKG +LEVI E S FASETVE                   +
Sbjct: 78   IALAETESSRKMLIDKLKEYKGKELEVIQEASTFASETVEPNNDLLLPPYPSRPPYSVSM 137

Query: 663  DNGYSSSFPSKHNLSRNVVNGLLPINKESK--LEKEQ--AQTPARNAFAGFRFFLSVAAK 496
            D  Y S  PS +   RN +  L P+ + +K   EKEQ   +  A+N+  G  FF++ AAK
Sbjct: 138  DKEYLSQIPSVNKSGRNGLITLDPMIEANKNLSEKEQNHVENGAKNSRKGLGFFITSAAK 197

Query: 495  TVVTLVGVVSILSLAGFEPRVR---RTTGFKFKIPSFE--------EKANTQCPPGKVLV 349
             ++T+VGVVSILSL+GF P++       G++ ++ + E        E+ N QCPPG++LV
Sbjct: 198  AMLTVVGVVSILSLSGFGPKLGVRFSVQGWRHRVENEERSTTKNGGERPNIQCPPGRILV 257

Query: 348  MENGEPRCLVKERVEIPFEPLVATPDVSYGFG 253
             ENGE RCLVKERVEIPF  + ATPD++YG G
Sbjct: 258  WENGEARCLVKERVEIPFSAVAATPDINYGCG 289


>ref|XP_002519107.1| non-symbiotic hemoglobin, putative [Ricinus communis]
           gi|223541770|gb|EEF43318.1| non-symbiotic hemoglobin,
           putative [Ricinus communis]
          Length = 537

 Score =  172 bits (435), Expect = 2e-40
 Identities = 104/242 (42%), Positives = 138/242 (57%), Gaps = 7/242 (2%)
 Frame = -2

Query: 963 GAEEED--ETTSLFSIRDXXXXXXXXXXXXXXXXXXQRYEREATLAEIDHSRKILLKKIK 790
           GAEEED  E   L  IRD                  QRYERE  L+EI+HSRK+LL K+K
Sbjct: 78  GAEEEDDGEAERLLHIRDALESLEHQLSNLQALQQQQRYEREVALSEIEHSRKMLLDKLK 137

Query: 789 EYKGGDLEVIHEVSAFASETVEXXXXXXXXXXXXXXXXXXXLDNGYSSSFPSKHNLSRNV 610
           EYKG DLEVI E SAFA ETVE                   +DN +     ++ ++   V
Sbjct: 138 EYKGEDLEVILEASAFAGETVEHNNDLLLPPYPSRPPQSLVVDNRHLPYPSTRKSVRNGV 197

Query: 609 VNGLLPINKESKLEKEQAQTPARNAFAGFRFFLSVAAKTVVTLVGVVSILSLAGFEPRV- 433
           + G    N     +  QA T +++   G    +  AAKTV+T++GV+S+LSL+GF P+  
Sbjct: 198 ITGEAKKNLNHS-DSNQADTKSKSLGKGLGHVIGTAAKTVITVLGVISVLSLSGFGPKFG 256

Query: 432 RRTTGFK----FKIPSFEEKANTQCPPGKVLVMENGEPRCLVKERVEIPFEPLVATPDVS 265
           +R   FK    F+ P  +EK N  CPPG++LV+E+GE RC+VKERV IPFE +V+ PDV+
Sbjct: 257 KRNIPFKITGLFQQPENKEKRNRDCPPGRILVLEDGEARCVVKERVAIPFESVVSKPDVN 316

Query: 264 YG 259
           YG
Sbjct: 317 YG 318


Top