BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000291
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-113
ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containi...   388   e-105
ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containi...   381   e-103
ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_002529725.1| pentatricopeptide repeat-containing protein,...   362   7e-98

>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like
            [Vitis vinifera]
          Length = 703

 Score =  412 bits (1059), Expect = e-113
 Identities = 202/298 (67%), Positives = 240/298 (80%)
 Frame = +3

Query: 27   PNEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGV 206
            PNEYIFAT++SSCS    V EG QCHGY LKSGLVFH YVKNALI MY+R  D++GA+ V
Sbjct: 127  PNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSV 186

Query: 207  FKTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDL 386
            +  VPGLDV SYN IING +ENGY SEALEV+  MVDE +VWD++TYVTA GLC+HLKDL
Sbjct: 187  WYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDL 246

Query: 387  KLGLQVHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAY 566
            +LGLQVH R+ R   E D FV SA+IDMYGKCG IL AR  F+ L  +NVV WT+++AAY
Sbjct: 247  RLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAY 306

Query: 567  AQNGCFEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHALKSGFKDYL 746
            +QNGCFEEALN + EM ++G+ PNEYT+AVLLNSCAG+S+L HG LL+    KSGF+D++
Sbjct: 307  SQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHI 366

Query: 747  IVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHHGLGREALLVFYGML 920
            IV NALINMYSKSGSIE A++VF  MI RD ITW++MI G SHHGLGREAL+VF  ML
Sbjct: 367  IVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEML 424



 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/293 (26%), Positives = 155/293 (52%), Gaps = 9/293 (3%)
 Frame = +3

Query: 42   FATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGVFKTVP 221
            + T    CS +  ++ G+Q H  + ++G  + S+V +A+I MY +C ++  A  VF  + 
Sbjct: 233  YVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQ 292

Query: 222  GLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDLKLGLQ 401
              +V+S+ +I+  + +NG   EAL     M  + ++ +  T+   L  CA +  L  G  
Sbjct: 293  TKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKL 352

Query: 402  VHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAYAQNGC 581
            +H+RI ++  E  + VG+A+I+MY K G I  A   F  +  R+ + W++++   + +G 
Sbjct: 353  LHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGL 412

Query: 582  FEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHG-----DLLNAHALKSGFKDYL 746
              EAL ++QEM+     P+  T+  +L++CA L S++ G      L+    ++ G + Y 
Sbjct: 413  GREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHY- 471

Query: 747  IVENALINMYSKSGSIEHA-NQVFSNMIYRDRITWNSMISG---YSHHGLGRE 893
                 ++ +  K+G ++ A N + S  +  D + W +++S    + ++GLG++
Sbjct: 472  ---TCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKK 521



 Score =  108 bits (271), Expect = 1e-21
 Identities = 63/194 (32%), Positives = 111/194 (57%), Gaps = 3/194 (1%)
 Frame = +3

Query: 348 VTALGLCAHLKDLKLGLQVHSRIL--RAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGL 521
           +  L + A  K+LK G  +H+ ++      + ++   +++I++Y KC +I+ AR  F G+
Sbjct: 29  IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 88

Query: 522 HDRNVVLWTSVMAAYAQNGCFEEALNLYQEMM-LEGVQPNEYTYAVLLNSCAGLSSLKHG 698
             RNVV W ++MA Y  NG   E L L++ M+ ++ ++PNEY +A +++SC+    +  G
Sbjct: 89  RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 148

Query: 699 DLLNAHALKSGFKDYLIVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHH 878
              + +ALKSG   +  V+NALI MYS+   ++ A  V+  +   D  ++N +I+G   +
Sbjct: 149 WQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLEN 208

Query: 879 GLGREALLVFYGML 920
           G   EAL V   M+
Sbjct: 209 GYPSEALEVLDRMV 222



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
 Frame = +3

Query: 27  PNEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGV 206
           PNEY FA +L+SC+ I A+  G   H  + KSG   H  V NALI+MY++   +E A  V
Sbjct: 329 PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKV 388

Query: 207 FKTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDL 386
           F  +   D ++++++I G   +G   EAL V   M+       ++T+V  L  CAHL  +
Sbjct: 389 FLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSV 448

Query: 387 KLGLQVHSRILR-AEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDR-NVVLWTSVMA 560
           + G    +++++   IE  V   + ++ +  K G++  A N       + +VV W ++++
Sbjct: 449 QEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLS 508

Query: 561 A 563
           A
Sbjct: 509 A 509


>ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like
            [Glycine max]
          Length = 694

 Score =  388 bits (996), Expect = e-105
 Identities = 187/302 (61%), Positives = 236/302 (78%), Gaps = 3/302 (0%)
 Frame = +3

Query: 24   CPNEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALG 203
            CPNEY+F T LS+CS    VKEGMQCHG + K GLV H YVK+AL+HMY+RC  +E AL 
Sbjct: 114  CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 204  VFKTVPGL---DVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAH 374
            V  TVPG    D+ SYNS++N  VE+G   EA+EV+  MVDE V WDH+TYV  +GLCA 
Sbjct: 174  VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 375  LKDLKLGLQVHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSV 554
            ++DL+LGL+VH+R+LR  +  D FVGS +IDMYGKCG++L ARN F GL +RNVV+WT++
Sbjct: 234  IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 555  MAAYAQNGCFEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHALKSGF 734
            M AY QNG FEE+LNL+  M  EG  PNEYT+AVLLN+CAG+++L+HGDLL+A   K GF
Sbjct: 294  MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353

Query: 735  KDYLIVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHHGLGREALLVFYG 914
            K+++IV NALINMYSKSGSI+ +  VF++MIYRD ITWN+MI GYSHHGLG++AL VF  
Sbjct: 354  KNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQD 413

Query: 915  ML 920
            M+
Sbjct: 414  MV 415



 Score =  126 bits (317), Expect = 6e-27
 Identities = 79/303 (26%), Positives = 154/303 (50%), Gaps = 7/303 (2%)
 Frame = +3

Query: 21  FCPNEYIFATVLSSCSAIMAVKEGMQCHG-YVLKSGLVFHSYVK--NALIHMYTRCLDME 191
           + P+      +L  C+ +  +  G   H  +++++    HS++   N+L+H+Y +C  + 
Sbjct: 8   YLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLG 67

Query: 192 GALGVFKTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVD-ENVVWDHITYVTALGLC 368
            A  +F  +P  +V+S+N ++ G++  G   E L +   MV  +N   +   + TAL  C
Sbjct: 68  LARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSAC 127

Query: 369 AHLKDLKLGLQVHSRILRAEIEIDVFVGSAVIDMYGKCGKI---LGARNAFHGLHDRNVV 539
           +H   +K G+Q H  + +  +    +V SA++ MY +C  +   L   +   G H  ++ 
Sbjct: 128 SHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIF 187

Query: 540 LWTSVMAAYAQNGCFEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHA 719
            + SV+ A  ++G  EEA+ + + M+ E V  +  TY  ++  CA +  L+ G  ++A  
Sbjct: 188 SYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARL 247

Query: 720 LKSGFKDYLIVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHHGLGREAL 899
           L+ G      V + LI+MY K G + +A  VF  +  R+ + W ++++ Y  +G   E+L
Sbjct: 248 LRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESL 307

Query: 900 LVF 908
            +F
Sbjct: 308 NLF 310



 Score =  126 bits (317), Expect = 6e-27
 Identities = 72/292 (24%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
 Frame = +3

Query: 42   FATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGVFKTVP 221
            +  V+  C+ I  ++ G++ H  +L+ GL+F  +V + LI MY +C ++  A  VF  + 
Sbjct: 224  YVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQ 283

Query: 222  GLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDLKLGLQ 401
              +V+ + +++  +++NGY  E+L +   M  E  + +  T+   L  CA +  L+ G  
Sbjct: 284  NRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDL 343

Query: 402  VHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAYAQNGC 581
            +H+R+ +   +  V V +A+I+MY K G I  + N F  +  R+++ W +++  Y+ +G 
Sbjct: 344  LHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGL 403

Query: 582  FEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHG-----DLLNAHALKSGFKDYL 746
             ++AL ++Q+M+     PN  T+  +L++ + L  +K G      L+    ++ G + Y 
Sbjct: 404  GKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHY- 462

Query: 747  IVENALINMYSKSGSIEHA-NQVFSNMIYRDRITWNSMISG---YSHHGLGR 890
                 ++ + S++G ++ A N + +  +  D + W ++++    + ++ LGR
Sbjct: 463  ---TCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGR 511



 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 7/195 (3%)
 Frame = +3

Query: 357 LGLCAHLKDLKLGLQVHSRIL---RAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHD 527
           L LCA +K L  G  +H++ L   +      +   ++++ +Y KCG++  ARN F  +  
Sbjct: 19  LKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPL 78

Query: 528 RNVVLWTSVMAAYAQNGCFEEALNLYQEMM-LEGVQPNEYTYAVLLNSCAGLSSLKHGDL 704
           RNVV W  +MA Y   G   E L L++ M+ L+   PNEY +   L++C+    +K G  
Sbjct: 79  RNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQ 138

Query: 705 LNAHALKSGFKDYLIVENALINMYSKSGSIEHANQVFSNM---IYRDRITWNSMISGYSH 875
            +    K G   +  V++AL++MYS+   +E A QV   +      D  ++NS+++    
Sbjct: 139 CHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVE 198

Query: 876 HGLGREALLVFYGML 920
            G G EA+ V   M+
Sbjct: 199 SGRGEEAVEVLRRMV 213



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 51/181 (28%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
 Frame = +3

Query: 27  PNEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGV 206
           PNEY FA +L++C+ I A++ G   H  V K G   H  V+NALI+MY++   ++ +  V
Sbjct: 320 PNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNV 379

Query: 207 FKTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDL 386
           F  +   D++++N++I G+  +G   +AL+V   MV      +++T++  L   +HL  +
Sbjct: 380 FTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLV 439

Query: 387 KLGLQVHSRILR-AEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDR-NVVLWTSVMA 560
           K G    + ++R  +IE  +   + ++ +  + G +  A N       + +VV W +++ 
Sbjct: 440 KEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLN 499

Query: 561 A 563
           A
Sbjct: 500 A 500


>ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like
            [Glycine max]
          Length = 703

 Score =  381 bits (979), Expect = e-103
 Identities = 181/298 (60%), Positives = 231/298 (77%)
 Frame = +3

Query: 27   PNEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGV 206
            PNEYIF  VLS C+    VKEG QCHGY+LKSGL+ H YVKNALIHMY+RC  ++ A+ +
Sbjct: 126  PNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQI 185

Query: 207  FKTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDL 386
              TVPG DV SYNSI++  VE+G   EA +V+  MVDE V+WD +TYV+ LGLCA ++DL
Sbjct: 186  LDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDL 245

Query: 387  KLGLQVHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAY 566
            +LGLQ+H+++L+  +  DVFV S +ID YGKCG++L AR  F GL DRNVV WT+V+ AY
Sbjct: 246  QLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAY 305

Query: 567  AQNGCFEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHALKSGFKDYL 746
             QNG FEE LNL+ +M LE  +PNE+T+AVLLN+CA L +L +GDLL+   + SGFK++L
Sbjct: 306  LQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHL 365

Query: 747  IVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHHGLGREALLVFYGML 920
            IV NALINMYSKSG+I+ +  VFSNM+ RD ITWN+MI GYSHHGLG++ALLVF  M+
Sbjct: 366  IVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMM 423



 Score =  135 bits (339), Expect = 2e-29
 Identities = 74/294 (25%), Positives = 157/294 (53%), Gaps = 10/294 (3%)
 Frame = +3

Query: 42   FATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGVFKTVP 221
            + +VL  C+ I  ++ G+Q H  +LK+GLVF  +V + LI  Y +C ++  A   F  + 
Sbjct: 232  YVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLR 291

Query: 222  GLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDLKLGLQ 401
              +V+++ +++  +++NG+  E L +   M  E+   +  T+   L  CA L  L  G  
Sbjct: 292  DRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDL 351

Query: 402  VHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAYAQNGC 581
            +H RI+ +  +  + VG+A+I+MY K G I  + N F  + +R+V+ W +++  Y+ +G 
Sbjct: 352  LHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGL 411

Query: 582  FEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHG-----DLLNAHALKSGFKDYL 746
             ++AL ++Q+MM  G  PN  T+  +L++C  L+ ++ G      ++    ++ G + Y 
Sbjct: 412  GKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHY- 470

Query: 747  IVENALINMYSKSGSIEHANQVF--SNMIYRDRITWNSMISG---YSHHGLGRE 893
                 ++ +  ++G ++ A      +  +  D + W ++++    + ++ LG++
Sbjct: 471  ---TCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQ 521



 Score =  102 bits (255), Expect = 1e-19
 Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
 Frame = +3

Query: 348 VTALGLCAHLKDLKLGLQVHSRIL---RAEIEIDVFVGSAVIDMYGKCGKILGARNAFHG 518
           V  L   A  K L+ G  +H++++   +   + D+   +++I++Y KCG+   AR  F  
Sbjct: 27  VNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDR 86

Query: 519 LHDRNVVLWTSVMAAYAQNGCFEEALNLYQEMM-LEGVQPNEYTYAVLLNSCAGLSSLKH 695
           +  RNVV W+++M  Y   G   E L L++ ++ L+   PNEY + ++L+ CA    +K 
Sbjct: 87  MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146

Query: 696 GDLLNAHALKSGFKDYLIVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSH 875
           G   + + LKSG   +  V+NALI+MYS+   ++ A Q+   +   D  ++NS++S    
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206

Query: 876 HGLGREALLVFYGML 920
            G   EA  V   M+
Sbjct: 207 SGCRGEAAQVLKRMV 221



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 32/262 (12%)
 Frame = +3

Query: 228 DVLSYNSIINGFVENGYLSEALEVMYYMVDENVV-W------------------------ 332
           D+   NS+IN + + G    A ++   M+  NVV W                        
Sbjct: 60  DITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLV 119

Query: 333 -------DHITYVTALGLCAHLKDLKLGLQVHSRILRAEIEIDVFVGSAVIDMYGKCGKI 491
                  +   +   L  CA    +K G Q H  +L++ + +  +V +A+I MY +C  +
Sbjct: 120 SLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHV 179

Query: 492 LGARNAFHGLHDRNVVLWTSVMAAYAQNGCFEEALNLYQEMMLEGVQPNEYTYAVLLNSC 671
             A      +   +V  + S+++A  ++GC  EA  + + M+ E V  +  TY  +L  C
Sbjct: 180 DSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLC 239

Query: 672 AGLSSLKHGDLLNAHALKSGFKDYLIVENALINMYSKSGSIEHANQVFSNMIYRDRITWN 851
           A +  L+ G  ++A  LK+G    + V + LI+ Y K G + +A + F  +  R+ + W 
Sbjct: 240 AQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWT 299

Query: 852 SMISGYSHHGLGREALLVFYGM 917
           ++++ Y  +G   E L +F  M
Sbjct: 300 AVLTAYLQNGHFEETLNLFTKM 321



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 57/218 (26%), Positives = 112/218 (51%), Gaps = 5/218 (2%)
 Frame = +3

Query: 27  PNEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGV 206
           PNE+ FA +L++C++++A+  G   HG ++ SG   H  V NALI+MY++  +++ +  V
Sbjct: 328 PNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNV 387

Query: 207 FKTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDL 386
           F  +   DV+++N++I G+  +G   +AL V   M+      +++T++  L  C HL  +
Sbjct: 388 FSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALV 447

Query: 387 KLGLQVHSRILRA-EIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAA 563
           + G     +I++  ++E  +   + ++ + G+ G +  A N    +     V W  V   
Sbjct: 448 QEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENF---MKTTTQVKWDVVAWR 504

Query: 564 YAQNGC-FEEALNLYQEMMLEGVQPNEY---TYAVLLN 665
              N C      NL +++    +Q + +   TY +L N
Sbjct: 505 TLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSN 542


>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
            predicted protein [Populus trichocarpa]
          Length = 707

 Score =  371 bits (953), Expect = e-100
 Identities = 177/298 (59%), Positives = 232/298 (77%)
 Frame = +3

Query: 27   PNEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGV 206
            PNEYI A  +SSC     V+EG QCHG +LK+G  FH+YV+NAL+ MY++C  ++ A+GV
Sbjct: 131  PNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGV 190

Query: 207  FKTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDL 386
            +  VP  D+++YNSI++  VENGYL E LEV+  MV E+V WD +T+V A  LCA LKDL
Sbjct: 191  WNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDL 250

Query: 387  KLGLQVHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAY 566
            +LGL VH ++L +++E D +V SA+I+MYGKCGK L AR  F GL  RNVVLWT+VMA+ 
Sbjct: 251  RLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASC 310

Query: 567  AQNGCFEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHALKSGFKDYL 746
             QNGCFEEALNL+ +M  E V+ NE+TYAVLLN+CAGLS+ ++G LL+ H+ KSGFK ++
Sbjct: 311  FQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHV 370

Query: 747  IVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHHGLGREALLVFYGML 920
            +V NALINMY+KSG IE A +VFS+M++RD ITWN+MI G+SHHGLG++ALLVF  ML
Sbjct: 371  MVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDML 428



 Score =  135 bits (340), Expect = 1e-29
 Identities = 78/288 (27%), Positives = 151/288 (52%), Gaps = 5/288 (1%)
 Frame = +3

Query: 42   FATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGVFKTVP 221
            F    S C+++  ++ G+  HG +L S +   +YV +A+I+MY +C     A GVF  + 
Sbjct: 237  FVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQ 296

Query: 222  GLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDLKLGLQ 401
              +V+ + +++    +NG   EAL +   M  ENV  +  TY   L  CA L   + G  
Sbjct: 297  SRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSL 356

Query: 402  VHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAYAQNGC 581
            +H    ++  +  V VG+A+I+MY K G I  A+  F  +  R+++ W +++  ++ +G 
Sbjct: 357  LHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGL 416

Query: 582  FEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHALKS-GFKDYLIVEN 758
             ++AL ++Q+M+     PN  T+  +L++C  L  ++ G     H +K  G +  L    
Sbjct: 417  GKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYT 476

Query: 759  ALINMYSKSGSIEHA-NQVFSNMIYRDRITWNSMISG---YSHHGLGR 890
             ++++ SK+G +  A N + +  +  D + W ++++    + ++GLGR
Sbjct: 477  CIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGR 524



 Score =  112 bits (279), Expect = 2e-22
 Identities = 68/282 (24%), Positives = 141/282 (50%), Gaps = 3/282 (1%)
 Frame = +3

Query: 81  VKEGMQCHGYVLKSGLVFHSYV--KNALIHMYTRCLDMEGALGVFKTVPGLDVLSYNSII 254
           +K G   H +++ +     + +   N+LI+ Y +   +  A  +F  +P  +V+S+++++
Sbjct: 45  LKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALM 104

Query: 255 NGFVENGYLSEALEVMYYMVDE-NVVWDHITYVTALGLCAHLKDLKLGLQVHSRILRAEI 431
            G++ NG+  + + ++  M+ E NV  +      A+  C     ++ G Q H  +L+   
Sbjct: 105 TGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGF 164

Query: 432 EIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAYAQNGCFEEALNLYQE 611
               +V +A++ MY KC  +  A   ++ +   ++V + S++++  +NG   E L + + 
Sbjct: 165 SFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRS 224

Query: 612 MMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHALKSGFKDYLIVENALINMYSKSGS 791
           M+ E V+ ++ T+    + CA L  L+ G  ++   L S  +    V +A+INMY K G 
Sbjct: 225 MVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGK 284

Query: 792 IEHANQVFSNMIYRDRITWNSMISGYSHHGLGREALLVFYGM 917
              A  VF  +  R+ + W ++++    +G   EAL +F  M
Sbjct: 285 SLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKM 326



 Score =  108 bits (269), Expect = 2e-21
 Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 3/194 (1%)
 Frame = +3

Query: 348 VTALGLCAHLKDLKLGLQVHSRILRAE--IEIDVFVGSAVIDMYGKCGKILGARNAFHGL 521
           +  L L A  K+LK+G  +HS ++      E  +   +++I+ Y K  ++  A N F  +
Sbjct: 33  IKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRM 92

Query: 522 HDRNVVLWTSVMAAYAQNGCFEEALNLYQEMMLEG-VQPNEYTYAVLLNSCAGLSSLKHG 698
            +RNVV W+++M  Y  NG   + + L ++M+ EG V PNEY  A+ ++SC     ++ G
Sbjct: 93  PERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEG 152

Query: 699 DLLNAHALKSGFKDYLIVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHH 878
              +   LK+GF  +  V NAL++MYSK   ++ A  V++ +   D + +NS++S    +
Sbjct: 153 RQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVEN 212

Query: 879 GLGREALLVFYGML 920
           G  RE L V   M+
Sbjct: 213 GYLREGLEVLRSMV 226



 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 51/180 (28%), Positives = 96/180 (53%), Gaps = 2/180 (1%)
 Frame = +3

Query: 30  NEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGVF 209
           NE+ +A +L++C+ + A + G   HG+  KSG   H  V NALI+MY +  D+E A  VF
Sbjct: 334 NEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVF 393

Query: 210 KTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDLK 389
             +   D++++N++I GF  +G   +AL V   M+      +++T+   L  C HL  ++
Sbjct: 394 SDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQ 453

Query: 390 LGL-QVHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDR-NVVLWTSVMAA 563
            G   +H  + +  ++  +   + ++ +  K G++  ARN       + +VV W +++ A
Sbjct: 454 EGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNA 513


>ref|XP_002529725.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530789|gb|EEF32654.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 347

 Score =  362 bits (929), Expect = 7e-98
 Identities = 173/295 (58%), Positives = 223/295 (75%)
 Frame = +3

Query: 27  PNEYIFATVLSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGALGV 206
           PNEYIFAT LSSCS    ++ G+QCHG+  KSGLVFH YV+NALIHMY++CL ++ A+ +
Sbjct: 38  PNEYIFATALSSCSDSGRIEVGIQCHGFAFKSGLVFHQYVRNALIHMYSKCLTIQEAMRI 97

Query: 207 FKTVPGLDVLSYNSIINGFVENGYLSEALEVMYYMVDENVVWDHITYVTALGLCAHLKDL 386
             +VP  D+ +YNS++ G +ENGYL E LE++  MV ENV WD +TYV   GLCA LK+L
Sbjct: 98  SDSVPRNDIFAYNSVLIGLMENGYLMEGLEILRKMVIENVEWDIVTYVNVFGLCACLKNL 157

Query: 387 KLGLQVHSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAY 566
           KLGLQVH R+L + ++ D +V SA I+MYG+CG  L A   F GL ++NVVLWT+ + AY
Sbjct: 158 KLGLQVHGRMLMSNVKCDAYVNSAAINMYGRCGDALNAHRVFDGLQNQNVVLWTAAITAY 217

Query: 567 AQNGCFEEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHALKSGFKDYL 746
             NGCFE+ALNL+ +M  E  + NE T+AVLLN+ AGLS+L+HG LL+A   KSGFKD++
Sbjct: 218 FHNGCFEKALNLFAKMQFEDTRANEITFAVLLNASAGLSALRHGHLLHACIEKSGFKDHI 277

Query: 747 IVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHHGLGREALLVFY 911
           IV NALINMY+K G I+ A  +FS+MI RD ITWN+MI GYSHHGLG++AL  FY
Sbjct: 278 IVGNALINMYAKGGIIKSAYIIFSDMINRDVITWNAMICGYSHHGLGKDALRGFY 332



 Score =  112 bits (280), Expect = 1e-22
 Identities = 63/231 (27%), Positives = 124/231 (53%), Gaps = 1/231 (0%)
 Frame = +3

Query: 228 DVLSYNSIINGFVENGYLSEALEVMYYMVDENVVW-DHITYVTALGLCAHLKDLKLGLQV 404
           +V+S+++++ G++ NG+  E + ++ +M+ E+ +  +   + TAL  C+    +++G+Q 
Sbjct: 3   NVVSWSALMAGYLHNGFSLEVISLLKHMIAESDISPNEYIFATALSSCSDSGRIEVGIQC 62

Query: 405 HSRILRAEIEIDVFVGSAVIDMYGKCGKILGARNAFHGLHDRNVVLWTSVMAAYAQNGCF 584
           H    ++ +    +V +A+I MY KC  I  A      +   ++  + SV+    +NG  
Sbjct: 63  HGFAFKSGLVFHQYVRNALIHMYSKCLTIQEAMRISDSVPRNDIFAYNSVLIGLMENGYL 122

Query: 585 EEALNLYQEMMLEGVQPNEYTYAVLLNSCAGLSSLKHGDLLNAHALKSGFKDYLIVENAL 764
            E L + ++M++E V+ +  TY  +   CA L +LK G  ++   L S  K    V +A 
Sbjct: 123 MEGLEILRKMVIENVEWDIVTYVNVFGLCACLKNLKLGLQVHGRMLMSNVKCDAYVNSAA 182

Query: 765 INMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHHGLGREALLVFYGM 917
           INMY + G   +A++VF  +  ++ + W + I+ Y H+G   +AL +F  M
Sbjct: 183 INMYGRCGDALNAHRVFDGLQNQNVVLWTAAITAYFHNGCFEKALNLFAKM 233



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = +3

Query: 528 RNVVLWTSVMAAYAQNGCFEEALNLYQEMMLEG-VQPNEYTYAVLLNSCAGLSSLKHGDL 704
           RNVV W+++MA Y  NG   E ++L + M+ E  + PNEY +A  L+SC+    ++ G  
Sbjct: 2   RNVVSWSALMAGYLHNGFSLEVISLLKHMIAESDISPNEYIFATALSSCSDSGRIEVGIQ 61

Query: 705 LNAHALKSGFKDYLIVENALINMYSKSGSIEHANQVFSNMIYRDRITWNSMISGYSHHGL 884
            +  A KSG   +  V NALI+MYSK  +I+ A ++  ++   D   +NS++ G   +G 
Sbjct: 62  CHGFAFKSGLVFHQYVRNALIHMYSKCLTIQEAMRISDSVPRNDIFAYNSVLIGLMENGY 121

Query: 885 GREALLVFYGML 920
             E L +   M+
Sbjct: 122 LMEGLEILRKMV 133