BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000279
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatul...   483   e-134
ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [...   482   e-134
ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [...   482   e-134
gb|ACU24295.1| unknown [Glycine max]                                  482   e-134
ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22...   481   e-133

>ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
           gi|355505623|gb|AES86765.1| 40S ribosomal protein S4
           [Medicago truncatula]
          Length = 264

 Score =  483 bits (1243), Expect = e-134
 Identities = 231/256 (90%), Positives = 248/256 (96%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNVIMVTGGRN 540
           VQ GQKGIPYLNTYDGRTIRYPDPLI+ANDTIKLDLE++KI DFIKFDVGNV+MVTGGRN
Sbjct: 129 VQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMVTGGRN 188

Query: 541 RGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGSKPWLSLPKGRGIKLTV 720
           RGRVG+IK REKH GTFET+HVQDA+GHEFATRLGNV+TIGKG+KPW+SLPKG+GIKLTV
Sbjct: 189 RGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTV 248

Query: 721 IEEARKRQSAQAATPA 768
           IEEARKRQ+AQ  T A
Sbjct: 249 IEEARKRQAAQNVTAA 264


>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  482 bits (1240), Expect = e-134
 Identities = 230/256 (89%), Positives = 248/256 (96%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNVIMVTGGRN 540
           VQ GQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLE +KIVDFIKFDVGNV+MVTGGRN
Sbjct: 129 VQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRN 188

Query: 541 RGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGSKPWLSLPKGRGIKLTV 720
           RGRVG+IK REKH G+FET+HVQDATGHEFATR+GNV+TIGKG+KPW+SLPKG+GIKL++
Sbjct: 189 RGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSI 248

Query: 721 IEEARKRQSAQAATPA 768
           IEEARKR +AQ AT A
Sbjct: 249 IEEARKRIAAQQATAA 264


>ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  482 bits (1240), Expect = e-134
 Identities = 230/256 (89%), Positives = 248/256 (96%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNVIMVTGGRN 540
           VQ GQKGIPYLNTYDGRTIRYPDPLIRANDT+KLDLE +KIVDFIKFDVGNV+MVTGGRN
Sbjct: 129 VQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTGGRN 188

Query: 541 RGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGSKPWLSLPKGRGIKLTV 720
           RGRVG+IK REKH G+FET+HVQDATGHEFATR+GNV+TIGKG+KPW+SLPKG+GIKL++
Sbjct: 189 RGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSI 248

Query: 721 IEEARKRQSAQAATPA 768
           IEEARKR +AQ AT A
Sbjct: 249 IEEARKRIAAQQATTA 264


>gb|ACU24295.1| unknown [Glycine max]
          Length = 264

 Score =  482 bits (1240), Expect = e-134
 Identities = 230/256 (89%), Positives = 248/256 (96%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNVIMVTGGRN 540
           VQ GQKGIPYLNTYDGRTIRYPDPLIRANDT+KLDLE +KIVDFIKFDVGNV+MVTGGRN
Sbjct: 129 VQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTGGRN 188

Query: 541 RGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGSKPWLSLPKGRGIKLTV 720
           RGRVG+IK REKH G+FET+HVQDATGHEFATR+GNV+TIGKG+KPW+SLPKG+GIKL++
Sbjct: 189 RGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSI 248

Query: 721 IEEARKRQSAQAATPA 768
           IEEARKR +AQ AT A
Sbjct: 249 IEEARKRIAAQQATTA 264


>ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22138108|gb|AAM93434.1|
           40S ribosomal S4 protein [Glycine max]
           gi|255641970|gb|ACU21252.1| unknown [Glycine max]
          Length = 264

 Score =  481 bits (1237), Expect = e-133
 Identities = 229/256 (89%), Positives = 248/256 (96%)
 Frame = +1

Query: 1   LKRLNAPHHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVAILMQR 180
           LKRLNAP HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV+AILMQR
Sbjct: 9   LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQR 68

Query: 181 HILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRS 360
           H+LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++D+EAKFKLCKVRS
Sbjct: 69  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRS 128

Query: 361 VQLGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLESSKIVDFIKFDVGNVIMVTGGRN 540
           VQ GQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLE +KIVDFIKFDVGNV+MVTGGRN
Sbjct: 129 VQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRN 188

Query: 541 RGRVGLIKRREKHPGTFETVHVQDATGHEFATRLGNVYTIGKGSKPWLSLPKGRGIKLTV 720
           RGRVG+IK REKH G+FET+HVQD+TGHEFATR+GNV+TIGKG+KPW+SLPKG+GIKL++
Sbjct: 189 RGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSI 248

Query: 721 IEEARKRQSAQAATPA 768
           IEEARKR +AQ AT A
Sbjct: 249 IEEARKRIAAQQATAA 264