BLASTX nr result

ID: Coptis24_contig00000139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000139
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524661.1| sirohydrochlorin ferrochelatase, putative [R...   265   8e-69
ref|XP_002273543.1| PREDICTED: sirohydrochlorin ferrochelatase-l...   261   1e-67
emb|CAN60425.1| hypothetical protein VITISV_021073 [Vitis vinifera]   249   6e-64
ref|XP_002299633.1| predicted protein [Populus trichocarpa] gi|2...   246   5e-63
ref|NP_564562.1| sirohydrochlorin ferrochelatase B [Arabidopsis ...   244   3e-62

>ref|XP_002524661.1| sirohydrochlorin ferrochelatase, putative [Ricinus communis]
           gi|223536022|gb|EEF37680.1| sirohydrochlorin
           ferrochelatase, putative [Ricinus communis]
          Length = 210

 Score =  265 bits (678), Expect = 8e-69
 Identities = 137/204 (67%), Positives = 158/204 (77%), Gaps = 5/204 (2%)
 Frame = +2

Query: 2   SLSLSSQLSVNRTSV--VGPNDRNSRWGIIKFVKLQRKSSYNIRNFSI---NSCFTTTSY 166
           S+SL  Q++VN +S    G + + ++    KF     K+ Y      +   NS FT    
Sbjct: 7   SMSLPLQITVNNSSASETGASYKWTQPAFAKFPTCPSKTKYLSSRMYLSTANSGFTDGII 66

Query: 167 GEFRDGVIIVDHGSRRKESNLMLNEFVAMFREKTKYPIVEPAHMELAEPSIKVAYNLCVQ 346
           G+  DG+IIVDHGSRRKESNLMLNEFV MFR++T YPIVEPAHMELAEPSIK A+ LCVQ
Sbjct: 67  GD-EDGLIIVDHGSRRKESNLMLNEFVNMFRDRTGYPIVEPAHMELAEPSIKDAFGLCVQ 125

Query: 347 QGANRIIVSPFFLAPGRHWHQDIPSLTADAAKEHSGVSYIITAPLGLHELLVDVVKDRIK 526
           QGANR+IVSPFFL PGRHWHQDIPSLTA+AAKEH GVSYI+TAPLGLHELLVDV+ DRI+
Sbjct: 126 QGANRVIVSPFFLFPGRHWHQDIPSLTAEAAKEHPGVSYIVTAPLGLHELLVDVLNDRIE 185

Query: 527 HCLSHVAGDADECDVCAGTGKCRL 598
           HCLSHVAGDADEC  C GTGKC+L
Sbjct: 186 HCLSHVAGDADECAACVGTGKCKL 209


>ref|XP_002273543.1| PREDICTED: sirohydrochlorin ferrochelatase-like [Vitis vinifera]
          Length = 208

 Score =  261 bits (668), Expect = 1e-67
 Identities = 140/210 (66%), Positives = 156/210 (74%), Gaps = 11/210 (5%)
 Frame = +2

Query: 2   SLSLSSQLSVNRTSV--VGPNDRNSRWGIIKFVKLQRKSSYNIRNFSINSCFT------- 154
           SLS   Q ++ R+S+  +G N +   W +  FVKLQR S  N R      C         
Sbjct: 3   SLSFPCQFTLKRSSIREIGTNPK---WVLPNFVKLQR-SWKNSRYLPTKGCLAAGNGGLG 58

Query: 155 --TTSYGEFRDGVIIVDHGSRRKESNLMLNEFVAMFREKTKYPIVEPAHMELAEPSIKVA 328
             T   G+ +DGVIIVDHGSRRKESNLMLNEFV MFR+KT Y IVEPAHMELAEPSI  A
Sbjct: 59  QQTNGVGD-KDGVIIVDHGSRRKESNLMLNEFVTMFRDKTGYLIVEPAHMELAEPSITNA 117

Query: 329 YNLCVQQGANRIIVSPFFLAPGRHWHQDIPSLTADAAKEHSGVSYIITAPLGLHELLVDV 508
           ++ CVQQGANR+IVSPFFL PGRHWHQDIPSLTA+AAKEH GVSY+ITAPLGLH LLVDV
Sbjct: 118 FSSCVQQGANRVIVSPFFLFPGRHWHQDIPSLTAEAAKEHPGVSYVITAPLGLHGLLVDV 177

Query: 509 VKDRIKHCLSHVAGDADECDVCAGTGKCRL 598
           V DRIKHCL HVAGD  EC VCAGTGKCR+
Sbjct: 178 VNDRIKHCLKHVAGDEAECAVCAGTGKCRV 207


>emb|CAN60425.1| hypothetical protein VITISV_021073 [Vitis vinifera]
          Length = 150

 Score =  249 bits (636), Expect = 6e-64
 Identities = 120/140 (85%), Positives = 126/140 (90%)
 Frame = +2

Query: 179 DGVIIVDHGSRRKESNLMLNEFVAMFREKTKYPIVEPAHMELAEPSIKVAYNLCVQQGAN 358
           DGVIIVDHGSRRKESNLMLNEFV MFR+KT Y IVEPAHMELAEPSI  A+N CVQQGAN
Sbjct: 5   DGVIIVDHGSRRKESNLMLNEFVTMFRDKTGYLIVEPAHMELAEPSITNAFNSCVQQGAN 64

Query: 359 RIIVSPFFLAPGRHWHQDIPSLTADAAKEHSGVSYIITAPLGLHELLVDVVKDRIKHCLS 538
           R+IVSPFFL PGRHWHQDIPSLTA+AAKEH GVSY+ITAPLGLH LLVDVV DRIKHCL 
Sbjct: 65  RVIVSPFFLFPGRHWHQDIPSLTAEAAKEHPGVSYVITAPLGLHGLLVDVVNDRIKHCLK 124

Query: 539 HVAGDADECDVCAGTGKCRL 598
           HVAGD  EC VCAGTGKCR+
Sbjct: 125 HVAGDEAECAVCAGTGKCRV 144


>ref|XP_002299633.1| predicted protein [Populus trichocarpa] gi|222846891|gb|EEE84438.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  246 bits (628), Expect = 5e-63
 Identities = 116/141 (82%), Positives = 129/141 (91%)
 Frame = +2

Query: 176 RDGVIIVDHGSRRKESNLMLNEFVAMFREKTKYPIVEPAHMELAEPSIKVAYNLCVQQGA 355
           +DGVIIVDHGSRRKESNLMLNEFVAMFR+KT Y IVEPAHMELAEPSI+ A+ LCVQQGA
Sbjct: 15  KDGVIIVDHGSRRKESNLMLNEFVAMFRDKTGYLIVEPAHMELAEPSIRDAFGLCVQQGA 74

Query: 356 NRIIVSPFFLAPGRHWHQDIPSLTADAAKEHSGVSYIITAPLGLHELLVDVVKDRIKHCL 535
           NR+IVSPFFL PGRHWH+DIPSLT +AAKEH GVSY+ITAPLGLHELLVDV+ DRI +CL
Sbjct: 75  NRVIVSPFFLFPGRHWHRDIPSLTDEAAKEHPGVSYLITAPLGLHELLVDVMNDRINYCL 134

Query: 536 SHVAGDADECDVCAGTGKCRL 598
           SH+AGDA+EC VC GT KC+L
Sbjct: 135 SHIAGDANECAVCVGTSKCKL 155


>ref|NP_564562.1| sirohydrochlorin ferrochelatase B [Arabidopsis thaliana]
           gi|28393329|gb|AAO42090.1| unknown protein [Arabidopsis
           thaliana] gi|28827668|gb|AAO50678.1| unknown protein
           [Arabidopsis thaliana] gi|332194400|gb|AEE32521.1|
           sirohydrochlorin ferrochelatase B [Arabidopsis thaliana]
          Length = 225

 Score =  244 bits (622), Expect = 3e-62
 Identities = 126/207 (60%), Positives = 149/207 (71%), Gaps = 11/207 (5%)
 Frame = +2

Query: 11  LSSQLSVNRTSVVGPND-----RNSRWGIIKFVKLQRKSSYNIRNFSINSCF------TT 157
           L+SQ ++   + V P+       N  W +    K+++      R    + CF        
Sbjct: 16  LASQSNLRANNRVSPSSCQITRTNRSWALPVSFKVEKFQLQRGRRRRGSPCFGESEGLVK 75

Query: 158 TSYGEFRDGVIIVDHGSRRKESNLMLNEFVAMFREKTKYPIVEPAHMELAEPSIKVAYNL 337
              G+  DG+IIVDHGSRR+ESNLML EFV MF+EKT YPIVEPAHMELAEPSIK A++L
Sbjct: 76  NGIGD-ADGIIIVDHGSRRRESNLMLEEFVKMFKEKTGYPIVEPAHMELAEPSIKDAFSL 134

Query: 338 CVQQGANRIIVSPFFLAPGRHWHQDIPSLTADAAKEHSGVSYIITAPLGLHELLVDVVKD 517
           CVQQGA R++VSPFFL PGRHWH DIPSLTADAAKE SG+SY+ITAPLG H LL+DVV D
Sbjct: 135 CVQQGAKRVVVSPFFLFPGRHWHTDIPSLTADAAKEFSGISYLITAPLGPHNLLLDVVND 194

Query: 518 RIKHCLSHVAGDADECDVCAGTGKCRL 598
           RI+HCLSHV GDADEC VCAGT KC+L
Sbjct: 195 RIQHCLSHVEGDADECLVCAGTNKCKL 221


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