BLASTX nr result

ID: Coptis23_contig00042987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042987
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313076.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002330264.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
emb|CBI40979.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002268809.1| PREDICTED: uncharacterized WD repeat-contain...   145   3e-33
emb|CAN66843.1| hypothetical protein VITISV_002364 [Vitis vinifera]   145   3e-33

>ref|XP_002313076.1| predicted protein [Populus trichocarpa] gi|222849484|gb|EEE87031.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/80 (87%), Positives = 75/80 (93%)
 Frame = -3

Query: 242 IRRHRNAIWIKHFDAISCLSLNEDQGLLYSGSWDKTLKVWRISDSKCLESINAHDDAVNS 63
           +RRHRN + IKHFDA+SCLSLNEDQGLLYSGSWDKTLKVWR SD KCLESINAHDDA+NS
Sbjct: 197 VRRHRNVLRIKHFDAVSCLSLNEDQGLLYSGSWDKTLKVWRTSDYKCLESINAHDDAINS 256

Query: 62  VVSGFDGLVFTGSADGTVKV 3
           VV+GFD LVFTGSADGTVKV
Sbjct: 257 VVTGFDSLVFTGSADGTVKV 276


>ref|XP_002330264.1| predicted protein [Populus trichocarpa] gi|222871299|gb|EEF08430.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/79 (86%), Positives = 75/79 (94%)
 Frame = -3

Query: 242 IRRHRNAIWIKHFDAISCLSLNEDQGLLYSGSWDKTLKVWRISDSKCLESINAHDDAVNS 63
           +RRHRN + IKHFDA+SCLSLN+DQGLLYSGSWDKTLKVWR+SD KCLESINAHDDA+NS
Sbjct: 190 VRRHRNVLRIKHFDAVSCLSLNQDQGLLYSGSWDKTLKVWRVSDYKCLESINAHDDAINS 249

Query: 62  VVSGFDGLVFTGSADGTVK 6
           VV+GFD LVFTGSADGTVK
Sbjct: 250 VVTGFDSLVFTGSADGTVK 268


>emb|CBI40979.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/80 (82%), Positives = 75/80 (93%)
 Frame = -3

Query: 242 IRRHRNAIWIKHFDAISCLSLNEDQGLLYSGSWDKTLKVWRISDSKCLESINAHDDAVNS 63
           +RRHRNA+WIKHFDAIS LSL+ED+  LYS SWDKT+KVWRISDSKCLES+N HDDAVN+
Sbjct: 168 VRRHRNALWIKHFDAISSLSLSEDKKFLYSASWDKTIKVWRISDSKCLESVNVHDDAVNA 227

Query: 62  VVSGFDGLVFTGSADGTVKV 3
           VV+GFDGLVFTGSADG+VKV
Sbjct: 228 VVAGFDGLVFTGSADGSVKV 247


>ref|XP_002268809.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 451

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/80 (82%), Positives = 75/80 (93%)
 Frame = -3

Query: 242 IRRHRNAIWIKHFDAISCLSLNEDQGLLYSGSWDKTLKVWRISDSKCLESINAHDDAVNS 63
           +RRHRNA+WIKHFDAIS LSL+ED+  LYS SWDKT+KVWRISDSKCLES+N HDDAVN+
Sbjct: 186 VRRHRNALWIKHFDAISSLSLSEDKKFLYSASWDKTIKVWRISDSKCLESVNVHDDAVNA 245

Query: 62  VVSGFDGLVFTGSADGTVKV 3
           VV+GFDGLVFTGSADG+VKV
Sbjct: 246 VVAGFDGLVFTGSADGSVKV 265


>emb|CAN66843.1| hypothetical protein VITISV_002364 [Vitis vinifera]
          Length = 511

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/80 (82%), Positives = 75/80 (93%)
 Frame = -3

Query: 242 IRRHRNAIWIKHFDAISCLSLNEDQGLLYSGSWDKTLKVWRISDSKCLESINAHDDAVNS 63
           +RRHRNA+WIKHFDAIS LSL+ED+  LYS SWDKT+KVWRISDSKCLES+N HDDAVN+
Sbjct: 246 VRRHRNALWIKHFDAISSLSLSEDKKFLYSASWDKTIKVWRISDSKCLESVNVHDDAVNA 305

Query: 62  VVSGFDGLVFTGSADGTVKV 3
           VV+GFDGLVFTGSADG+VKV
Sbjct: 306 VVAGFDGLVFTGSADGSVKV 325


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