BLASTX nr result

ID: Coptis23_contig00042984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042984
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-...    78   7e-13
ref|XP_002522201.1| hypothetical protein RCOM_1731940 [Ricinus c...    75   7e-12
ref|XP_004169667.1| PREDICTED: trihelix transcription factor GT-...    74   1e-11
ref|XP_004147355.1| PREDICTED: LOW QUALITY PROTEIN: trihelix tra...    74   1e-11
emb|CBI37606.3| unnamed protein product [Vitis vinifera]               70   2e-10

>ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-2 [Vitis vinifera]
          Length = 510

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 16/112 (14%)
 Frame = +2

Query: 2   NKMRPEDSKTCPYFHQLEALYKDKMDKIDKALSPS-YGLKAEDLVMHM--TSQYRHQSES 172
           NK RPEDSKTCPYFHQL+ALYK+K  K++   + S Y LK ED++M M   S+ R QSES
Sbjct: 394 NKRRPEDSKTCPYFHQLDALYKEKTKKVENPDNNSGYNLKPEDILMQMMGQSEQRPQSES 453

Query: 173 LRLEHMGLDLAA---EDLRSENDHENGDAE----------DVYENLINNPSS 289
           +  E    ++ A   E+   E + E+GD E          D Y+ + NN SS
Sbjct: 454 VTEEGGSENVNANQEEEEEEEEEEEDGDEEGGDGDEDDEADGYQIVANNTSS 505


>ref|XP_002522201.1| hypothetical protein RCOM_1731940 [Ricinus communis]
           gi|223538572|gb|EEF40176.1| hypothetical protein
           RCOM_1731940 [Ricinus communis]
          Length = 408

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2   NKMRPEDSKTCPYFHQLEALYKDKMDKIDKALSPSYGLKAEDLVMH-MTSQYRHQSESLR 178
           NK RP+D+KTCPYF QL+ LY+ K  K+DK++     LK E+L+MH M  Q   Q +   
Sbjct: 309 NKRRPDDAKTCPYFQQLDVLYRQKTRKVDKSVISGQELKPEELLMHMMVGQEERQQQGSA 368

Query: 179 LEHMGLDLAAEDLRSENDHENGDAEDVYENLINNPSS 289
               G  L   D   E+D EN D ED +  + N+PSS
Sbjct: 369 TTEEGESLNV-DQNQEDDREN-DNEDNFRVVANDPSS 403


>ref|XP_004169667.1| PREDICTED: trihelix transcription factor GT-2-like [Cucumis
           sativus]
          Length = 499

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
 Frame = +2

Query: 2   NKMRPEDSKTCPYFHQLEALYKDKMDK-IDKALSPSYGLKAEDLVMHM--TSQYRHQSES 172
           NK RPEDSKTCPYF QL+ALYK K  K I+   +P+Y LK E+L+MHM  + +  HQ ES
Sbjct: 393 NKKRPEDSKTCPYFQQLDALYKQKSKKVINNPANPNYELKPEELLMHMMGSQEETHQPES 452

Query: 173 LRLEHMGLDLAAEDLRSENDHENGDAEDVYENLINN 280
              +  G    A++   E++ E G+ ED    ++ N
Sbjct: 453 ATDD--GEAENADNQNQEDEGEEGEDEDEDYRIVAN 486


>ref|XP_004147355.1| PREDICTED: LOW QUALITY PROTEIN: trihelix transcription factor
           GT-2-like [Cucumis sativus]
          Length = 440

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
 Frame = +2

Query: 2   NKMRPEDSKTCPYFHQLEALYKDKMDK-IDKALSPSYGLKAEDLVMHM--TSQYRHQSES 172
           NK RPEDSKTCPYF QL+ALYK K  K I+   +P+Y LK E+L+MHM  + +  HQ ES
Sbjct: 334 NKKRPEDSKTCPYFQQLDALYKQKSKKVINNPANPNYELKPEELLMHMMGSQEETHQPES 393

Query: 173 LRLEHMGLDLAAEDLRSENDHENGDAEDVYENLINN 280
              +  G    A++   E++ E G+ ED    ++ N
Sbjct: 394 ATDD--GEAENADNQNQEDEGEEGEDEDEDYRIVAN 427


>emb|CBI37606.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +2

Query: 2   NKMRPEDSKTCPYFHQLEALYKDKMDKIDKALSPS-YGLKAEDLVMHM--TSQYRHQSES 172
           NK RPEDSKTCPYFHQL+ALYK+K  K++   + S Y LK ED++M M   S+ R QSES
Sbjct: 374 NKRRPEDSKTCPYFHQLDALYKEKTKKVENPDNNSGYNLKPEDILMQMMGQSEQRPQSES 433

Query: 173 LRLE 184
           +  E
Sbjct: 434 VTEE 437


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