BLASTX nr result
ID: Coptis23_contig00042956
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00042956 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246... 94 1e-17 emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera] 94 1e-17 emb|CBI37224.3| unnamed protein product [Vitis vinifera] 92 6e-17 ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|2... 89 5e-16 dbj|BAK04620.1| predicted protein [Hordeum vulgare subsp. vulgare] 85 5e-15 >ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246307 [Vitis vinifera] Length = 1012 Score = 93.6 bits (231), Expect = 1e-17 Identities = 46/60 (76%), Positives = 52/60 (86%), Gaps = 2/60 (3%) Frame = -2 Query: 179 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKLGN 6 EFSLKETSPHLGGG ++DKTSSTYDLVEQ+QYLYVR++K RD+S GEV AEVKLGN Sbjct: 242 EFSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKLGN 301 >emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera] Length = 1012 Score = 93.6 bits (231), Expect = 1e-17 Identities = 46/60 (76%), Positives = 52/60 (86%), Gaps = 2/60 (3%) Frame = -2 Query: 179 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKLGN 6 EFSLKETSPHLGGG ++DKTSSTYDLVEQ+QYLYVR++K RD+S GEV AEVKLGN Sbjct: 242 EFSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKLGN 301 >emb|CBI37224.3| unnamed protein product [Vitis vinifera] Length = 868 Score = 91.7 bits (226), Expect = 6e-17 Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 2/59 (3%) Frame = -2 Query: 176 FSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKLGN 6 FSLKETSPHLGGG ++DKTSSTYDLVEQ+QYLYVR++K RD+S GEV AEVKLGN Sbjct: 225 FSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKLGN 283 >ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|222843560|gb|EEE81107.1| predicted protein [Populus trichocarpa] Length = 1023 Score = 88.6 bits (218), Expect = 5e-16 Identities = 47/60 (78%), Positives = 50/60 (83%), Gaps = 2/60 (3%) Frame = -2 Query: 179 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKAR--DISTMGEVTAEVKLGN 6 EFSLKETSPHLGGG NKDKTSSTYDLVE +QYLYVRVVKA+ + GEV AEVKLGN Sbjct: 252 EFSLKETSPHLGGGRLNKDKTSSTYDLVELMQYLYVRVVKAKYNMLFGGGEVVAEVKLGN 311 >dbj|BAK04620.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1015 Score = 85.1 bits (209), Expect = 5e-15 Identities = 42/58 (72%), Positives = 48/58 (82%) Frame = -2 Query: 179 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTMGEVTAEVKLGN 6 +FSLKET PHLGGG DK S+TYDLVEQ+QYLYVRVV+AR ++T GE AEVKLGN Sbjct: 245 DFSLKETRPHLGGG-LTADKASATYDLVEQMQYLYVRVVRARGVATPGEAVAEVKLGN 301