BLASTX nr result

ID: Coptis23_contig00042956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042956
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246...    94   1e-17
emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]    94   1e-17
emb|CBI37224.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
dbj|BAK04620.1| predicted protein [Hordeum vulgare subsp. vulgare]     85   5e-15

>ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246307 [Vitis vinifera]
          Length = 1012

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/60 (76%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
 Frame = -2

Query: 179 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKLGN 6
           EFSLKETSPHLGGG  ++DKTSSTYDLVEQ+QYLYVR++K RD+S    GEV AEVKLGN
Sbjct: 242 EFSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKLGN 301


>emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]
          Length = 1012

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/60 (76%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
 Frame = -2

Query: 179 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKLGN 6
           EFSLKETSPHLGGG  ++DKTSSTYDLVEQ+QYLYVR++K RD+S    GEV AEVKLGN
Sbjct: 242 EFSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKLGN 301


>emb|CBI37224.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
 Frame = -2

Query: 176 FSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTM--GEVTAEVKLGN 6
           FSLKETSPHLGGG  ++DKTSSTYDLVEQ+QYLYVR++K RD+S    GEV AEVKLGN
Sbjct: 225 FSLKETSPHLGGGLLHRDKTSSTYDLVEQMQYLYVRILKCRDVSASGGGEVMAEVKLGN 283


>ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|222843560|gb|EEE81107.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/60 (78%), Positives = 50/60 (83%), Gaps = 2/60 (3%)
 Frame = -2

Query: 179 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKAR--DISTMGEVTAEVKLGN 6
           EFSLKETSPHLGGG  NKDKTSSTYDLVE +QYLYVRVVKA+   +   GEV AEVKLGN
Sbjct: 252 EFSLKETSPHLGGGRLNKDKTSSTYDLVELMQYLYVRVVKAKYNMLFGGGEVVAEVKLGN 311


>dbj|BAK04620.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1015

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/58 (72%), Positives = 48/58 (82%)
 Frame = -2

Query: 179 EFSLKETSPHLGGGAFNKDKTSSTYDLVEQVQYLYVRVVKARDISTMGEVTAEVKLGN 6
           +FSLKET PHLGGG    DK S+TYDLVEQ+QYLYVRVV+AR ++T GE  AEVKLGN
Sbjct: 245 DFSLKETRPHLGGG-LTADKASATYDLVEQMQYLYVRVVRARGVATPGEAVAEVKLGN 301


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