BLASTX nr result
ID: Coptis23_contig00042916
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00042916 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267383.1| PREDICTED: NAC domain-containing protein 43-... 80 1e-13 dbj|BAK14367.1| transcription factor [Populus trichocarpa] 72 5e-11 ref|XP_002302672.1| NAC domain protein, IPR003441 [Populus trich... 72 5e-11 gb|ADL36808.1| NAC domain class transcription factor [Malus x do... 70 2e-10 gb|ADL36793.1| NAC domain class transcription factor [Malus x do... 66 3e-09 >ref|XP_002267383.1| PREDICTED: NAC domain-containing protein 43-like [Vitis vinifera] Length = 390 Score = 80.5 bits (197), Expect = 1e-13 Identities = 41/74 (55%), Positives = 56/74 (75%), Gaps = 5/74 (6%) Frame = +1 Query: 1 DTSKQLSFFSDPSLMFSTST--HDNDLQFPQIRSAN---RLYHSTQNFNSEIDLWNFKQS 165 DTSKQL+ F+DPS+ FS+ T +D+D Q Q RS++ R YH TQ++N+EIDLW+F +S Sbjct: 315 DTSKQLACFNDPSMPFSSPTDHNDHDSQLLQPRSSSSTTRSYHPTQDYNTEIDLWSFTRS 374 Query: 166 SSSSSDPLCHMSNS 207 SSDPLCH+SN+ Sbjct: 375 CLQSSDPLCHISNT 388 >dbj|BAK14367.1| transcription factor [Populus trichocarpa] Length = 381 Score = 72.0 bits (175), Expect = 5e-11 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 7/78 (8%) Frame = +1 Query: 1 DTSKQLSFF-SDPSLMFSTSTH-DNDLQFPQIRSA-----NRLYHSTQNFNSEIDLWNFK 159 +TS+Q + F +DP++ + T T +DLQFP +RS+ NR YH TQ++NSEIDLWNF Sbjct: 306 ETSRQSACFPNDPTMTYCTPTDLHHDLQFPTLRSSFSFPSNRSYHETQDYNSEIDLWNF- 364 Query: 160 QSSSSSSDPLCHMSNSSV 213 SS SSSDP H+ N+SV Sbjct: 365 -SSRSSSDPQWHLPNTSV 381 >ref|XP_002302672.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222844398|gb|EEE81945.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|312618426|gb|ADR00333.1| wood-associated NAC domain transcription factor 2B [Populus trichocarpa] Length = 371 Score = 72.0 bits (175), Expect = 5e-11 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 7/78 (8%) Frame = +1 Query: 1 DTSKQLSFF-SDPSLMFSTSTH-DNDLQFPQIRSA-----NRLYHSTQNFNSEIDLWNFK 159 +TS+Q + F +DP++ + T T +DLQFP +RS+ NR YH TQ++NSEIDLWNF Sbjct: 296 ETSRQSACFPNDPTMTYCTPTDLHHDLQFPTLRSSFSFPSNRSYHETQDYNSEIDLWNF- 354 Query: 160 QSSSSSSDPLCHMSNSSV 213 SS SSSDP H+ N+SV Sbjct: 355 -SSRSSSDPQWHLPNTSV 371 >gb|ADL36808.1| NAC domain class transcription factor [Malus x domestica] Length = 400 Score = 69.7 bits (169), Expect = 2e-10 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 8/75 (10%) Frame = +1 Query: 1 DTSKQLSFFSDPSLMFSTSTHDND------LQFPQIRSANRLYHSTQNFNSEIDLWNFKQ 162 +T K LS F DP++ F +S H ND L +P +R++ H ++ +N+E DLWNF + Sbjct: 325 ETPKHLSCFGDPNMAFCSSPHPNDQDNDVQLSYPYLRTSRSSDHQSEVYNNENDLWNFTK 384 Query: 163 SSS--SSSDPLCHMS 201 SSS SSSDPLCH+S Sbjct: 385 SSSSPSSSDPLCHLS 399 >gb|ADL36793.1| NAC domain class transcription factor [Malus x domestica] Length = 401 Score = 66.2 bits (160), Expect = 3e-09 Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 9/75 (12%) Frame = +1 Query: 4 TSKQLSFFSDPSLMFSTST-----HDNDLQ--FPQIRSANRLYHSTQNFNSEIDLWNFKQ 162 T K LS F DP++ F +S HD+D+Q +P +R+++ +H + +N+E DLWNF + Sbjct: 326 TPKHLSCFGDPNMAFCSSPPPRNDHDHDVQLSYPYLRTSSSSHHQSDVYNNENDLWNFTK 385 Query: 163 SSS--SSSDPLCHMS 201 SSS SS+DPLCH+S Sbjct: 386 SSSSPSSTDPLCHLS 400