BLASTX nr result

ID: Coptis23_contig00042913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042913
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002963881.1| hypothetical protein SELMODRAFT_80725 [Selag...    86   4e-15
ref|XP_002988284.1| hypothetical protein SELMODRAFT_127685 [Sela...    86   4e-15
ref|XP_001777068.1| predicted protein [Physcomitrella patens sub...    83   2e-14
ref|XP_001764592.1| predicted protein [Physcomitrella patens sub...    82   3e-14
ref|XP_002306752.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14

>ref|XP_002963881.1| hypothetical protein SELMODRAFT_80725 [Selaginella moellendorffii]
           gi|300169149|gb|EFJ35752.1| hypothetical protein
           SELMODRAFT_80725 [Selaginella moellendorffii]
          Length = 348

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/90 (41%), Positives = 56/90 (62%)
 Frame = +2

Query: 2   ARKFLVTGLAPLGCLPIVIALYCKDTNQCYEHHNEVSRKFSAKIKTMVQQLNQDLPGASL 181
           ARK +V  + PLGC+P  + LY   T  C E    + R F+  +K M+ +LN  LPGA++
Sbjct: 195 ARKIVVANVGPLGCIPSSLFLYNSTTGGCIEPVEAIVRDFNDALKPMLVELNSQLPGATI 254

Query: 182 LYWDIYTATRQIIDNPSQYGFKYMHAACCG 271
           +Y ++Y   R +ID+PS++GF Y +  CCG
Sbjct: 255 VYGNVYNIFRDVIDHPSKFGFDYGNRGCCG 284


>ref|XP_002988284.1| hypothetical protein SELMODRAFT_127685 [Selaginella moellendorffii]
           gi|300144016|gb|EFJ10703.1| hypothetical protein
           SELMODRAFT_127685 [Selaginella moellendorffii]
          Length = 348

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/90 (41%), Positives = 56/90 (62%)
 Frame = +2

Query: 2   ARKFLVTGLAPLGCLPIVIALYCKDTNQCYEHHNEVSRKFSAKIKTMVQQLNQDLPGASL 181
           ARK +V  + PLGC+P  + LY   T  C E    + R F+  +K M+ +LN  LPGA++
Sbjct: 195 ARKIVVANVGPLGCIPSSLFLYNSTTGGCIEPVEAIVRDFNDALKPMLVELNSQLPGATI 254

Query: 182 LYWDIYTATRQIIDNPSQYGFKYMHAACCG 271
           +Y ++Y   R +ID+PS++GF Y +  CCG
Sbjct: 255 VYGNVYNIFRDVIDHPSKFGFDYGNRGCCG 284


>ref|XP_001777068.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162671511|gb|EDQ58061.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 323

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/89 (43%), Positives = 53/89 (59%)
 Frame = +2

Query: 5   RKFLVTGLAPLGCLPIVIALYCKDTNQCYEHHNEVSRKFSAKIKTMVQQLNQDLPGASLL 184
           RK  V GLAPLGC P  I  Y      C E  N+VS K++  +K M+ QL ++L    L+
Sbjct: 186 RKVGVAGLAPLGCCPSQITKYNLTAGNCVEFLNDVSEKYNDALKNMLLQLREELEDFHLV 245

Query: 185 YWDIYTATRQIIDNPSQYGFKYMHAACCG 271
           Y ++Y    + I+NP+ YGF + HAACCG
Sbjct: 246 YSNLYDPLMEAINNPAMYGFNFTHAACCG 274


>ref|XP_001764592.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162684170|gb|EDQ70574.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 365

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/90 (42%), Positives = 51/90 (56%)
 Frame = +2

Query: 2   ARKFLVTGLAPLGCLPIVIALYCKDTNQCYEHHNEVSRKFSAKIKTMVQQLNQDLPGASL 181
           ARK +V  L PLGC+P  +        +C +  N   R F+A +  MV+QLN +LPGA  
Sbjct: 214 ARKVVVASLGPLGCIPFQLTFRLSRHGECSDKVNAEVRDFNAGLFAMVEQLNAELPGAKF 273

Query: 182 LYWDIYTATRQIIDNPSQYGFKYMHAACCG 271
           +Y D Y    ++I NPS YGFK +   CCG
Sbjct: 274 IYADAYKGVLEMIQNPSAYGFKVVDEGCCG 303


>ref|XP_002306752.1| predicted protein [Populus trichocarpa] gi|222856201|gb|EEE93748.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/90 (40%), Positives = 56/90 (62%)
 Frame = +2

Query: 2   ARKFLVTGLAPLGCLPIVIALYCKDTNQCYEHHNEVSRKFSAKIKTMVQQLNQDLPGASL 181
           ARK  +TGL+P+GCLP+  A      N C + +N+++ +F+ K+  +V +LN +LPG  +
Sbjct: 195 ARKLSLTGLSPMGCLPLERATNFMHPNSCVKEYNDLALEFNGKLNQLVAKLNDELPGMKV 254

Query: 182 LYWDIYTATRQIIDNPSQYGFKYMHAACCG 271
           L+ + Y    Q+I  PSQYGF+     CCG
Sbjct: 255 LFANPYDLLLQLITAPSQYGFENAEVGCCG 284


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