BLASTX nr result

ID: Coptis23_contig00042889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042889
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631646.1| PREDICTED: uncharacterized protein LOC100853...   105   3e-21
ref|XP_004162746.1| PREDICTED: uncharacterized LOC101203623 [Cuc...   100   2e-19
ref|XP_004137132.1| PREDICTED: uncharacterized protein LOC101203...   100   2e-19
ref|XP_002519097.1| conserved hypothetical protein [Ricinus comm...    83   2e-14
ref|XP_003624287.1| hypothetical protein MTR_7g081270 [Medicago ...    81   8e-14

>ref|XP_003631646.1| PREDICTED: uncharacterized protein LOC100853221 [Vitis vinifera]
           gi|297741449|emb|CBI32580.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = +2

Query: 44  IRFPTSHRENIRYLKSLHIISPITKKKIF-SPQTIHQILTLINYLKHKSFSDQQIKKLAF 220
           +RF TSHREN+RYLK+L II P TK   F SP+ + Q+L+ +N+LK K FS+    +L+F
Sbjct: 31  LRFRTSHRENLRYLKTLGIIDPSTKPHKFPSPEAVDQVLSTVNFLKSKGFSEPDFPRLSF 90

Query: 221 LCPELFSSDIVPTDINPVFEFLTTSLLAS 307
           LCP+LFSSD  PTDI PVF+FLT  L AS
Sbjct: 91  LCPKLFSSDSDPTDIEPVFDFLTLDLAAS 119


>ref|XP_004162746.1| PREDICTED: uncharacterized LOC101203623 [Cucumis sativus]
          Length = 282

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/88 (55%), Positives = 62/88 (70%)
 Frame = +2

Query: 44  IRFPTSHRENIRYLKSLHIISPITKKKIFSPQTIHQILTLINYLKHKSFSDQQIKKLAFL 223
           I F TSH +NIRYLKSL++I P T+    SP  +HQILT +++LK K FSD    +LAFL
Sbjct: 40  INFRTSHHQNIRYLKSLNVIDPQTR--FHSPDAVHQILTTVHFLKSKGFSDSDFPRLAFL 97

Query: 224 CPELFSSDIVPTDINPVFEFLTTSLLAS 307
           CP LF+S+   TDI PVF+FL T + AS
Sbjct: 98  CPNLFTSNFDTTDIAPVFQFLATDISAS 125


>ref|XP_004137132.1| PREDICTED: uncharacterized protein LOC101203623 [Cucumis sativus]
          Length = 308

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/88 (55%), Positives = 62/88 (70%)
 Frame = +2

Query: 44  IRFPTSHRENIRYLKSLHIISPITKKKIFSPQTIHQILTLINYLKHKSFSDQQIKKLAFL 223
           I F TSH +NIRYLKSL++I P T+    SP  +HQILT +++LK K FSD    +LAFL
Sbjct: 66  INFRTSHHQNIRYLKSLNVIDPQTR--FHSPDAVHQILTTVHFLKSKGFSDSDFPRLAFL 123

Query: 224 CPELFSSDIVPTDINPVFEFLTTSLLAS 307
           CP LF+S+   TDI PVF+FL T + AS
Sbjct: 124 CPNLFTSNFDTTDIAPVFQFLATDISAS 151


>ref|XP_002519097.1| conserved hypothetical protein [Ricinus communis]
           gi|223541760|gb|EEF43308.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = +2

Query: 44  IRFPTSHRENIRYLKSLHIISPITKK-KIFSPQTIHQILTLINYLKHKSFSDQQIKKLAF 220
           ++F T+++EN+RYLK++ II P TK  K+ SP T+  IL  +N+ K K F D    +L  
Sbjct: 31  LKFRTTNQENVRYLKAIGIIDPNTKPHKLPSPDTVTHILNTVNFFKSKGFQDADFSRLTS 90

Query: 221 LCPELFSSDIVPTDINPVFEFLTTSLLAS 307
            CP+L SS+   TDI PVF+FL T L AS
Sbjct: 91  ECPQLLSSEFEITDIEPVFKFLDTDLHAS 119


>ref|XP_003624287.1| hypothetical protein MTR_7g081270 [Medicago truncatula]
           gi|124359483|gb|ABN05921.1| Mitochodrial transcription
           termination factor-related [Medicago truncatula]
           gi|355499302|gb|AES80505.1| hypothetical protein
           MTR_7g081270 [Medicago truncatula]
          Length = 284

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = +2

Query: 44  IRFPTSHRENIRYLKSLHIISPITK-KKIFSPQTIHQILTLINYLKHKSFSDQQIKKLAF 220
           I+F T++ EN+ YLK+L II+P TK   +  P TI+ ILT+I +LK  SF++  I +L  
Sbjct: 37  IKFRTTYNENLHYLKALTIINPNTKPNNLPHPDTINHILTIITFLKSHSFTEADIPRLVH 96

Query: 221 LCPELFSSDIVPTDINPVFEFLTTSLLAS 307
             P LF++ I PT ++PVF FL + LLAS
Sbjct: 97  HSPHLFTTSISPTSLSPVFTFLASDLLAS 125


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