BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042871
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...    62   5e-08
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,...    62   5e-08
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]    62   5e-08
ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selag...    61   8e-08

>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
 Frame = +2

Query: 98  NRLLFMYVSCGSLDSARELFDKMTV--KDSISWAIMIAGCVENEEYLEALTLF 250
           NR+L MYVSCG + +AR +FDKM V  K+SISWAIM+A  ++N  Y EA+ LF
Sbjct: 116 NRILLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLF 168


>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = +2

Query: 98  NRLLFMYVSCGSLDSARELFDKMTV-KDSISWAIMIAGCVENEEYLEALTLFRYKQMGYQ 274
           +RLL M+VSCG LD AR LFDKM + KD ISW I+I GC  N +Y   + LF    + + 
Sbjct: 113 HRLLLMHVSCGQLDIARNLFDKMPLKKDFISWVIVIVGCFSNSKYEAGINLFIDMLLQHS 172

Query: 275 CYE 283
            Y+
Sbjct: 173 VYD 175


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
 Frame = +2

Query: 98  NRLLFMYVSCGSLDSARELFDKMTV--KDSISWAIMIAGCVENEEYLEALTLF 250
           NR+L MYVSCG + +AR +FDKM V  K+SISWAIM+A  ++N  Y EA+ LF
Sbjct: 279 NRILLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLF 331


>ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|222840702|gb|EEE78249.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/51 (58%), Positives = 35/51 (68%)
 Frame = +2

Query: 98  NRLLFMYVSCGSLDSARELFDKMTVKDSISWAIMIAGCVENEEYLEALTLF 250
           N L+ MYV CG + SAR LFDKM  +D ISW  MI+G  EN+E LE L LF
Sbjct: 174 NALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELF 224


>ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
           gi|300160530|gb|EFJ27147.1| hypothetical protein
           SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/51 (58%), Positives = 34/51 (66%)
 Frame = +2

Query: 98  NRLLFMYVSCGSLDSARELFDKMTVKDSISWAIMIAGCVENEEYLEALTLF 250
           N LL MYV CGSL+ AR++FD M   D+ SW  MI  C EN E LEAL LF
Sbjct: 128 NALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELF 178