BLASTX nr result

ID: Coptis23_contig00042864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042864
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19998.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002266017.1| PREDICTED: probable WRKY transcription facto...   123   2e-26
ref|XP_002527935.1| WRKY transcription factor, putative [Ricinus...   112   3e-23
gb|ACU21043.1| unknown [Glycine max]                                  105   3e-21
ref|XP_002298189.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>emb|CBI19998.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score =  123 bits (308), Expect = 2e-26
 Identities = 73/151 (48%), Positives = 91/151 (60%)
 Frame = -1

Query: 453 TVAPGCPVRKQVQRCQEDMSILITTYEGTHNHPLPVGXXXXXXXXXXXANYMLARANSNN 274
           TVAPGCPVRKQVQRC EDMSILITTYEGTHNHPLPVG           A++ML   +S+N
Sbjct: 258 TVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTTSAAASFML--VDSSN 315

Query: 273 HTSADTIDNMQISNFRQNPHMINHSAPHSSSIHSMFNSNDSSKGVVLDLTNNRYNSPQQQ 94
             S       + S    N H IN  +  SSS+    N ND SKG+VLDLTN   + P QQ
Sbjct: 316 PLS-------EASLSYPNSHFINPGS--SSSMIRSINPNDPSKGIVLDLTNTTPSDP-QQ 365

Query: 93  YTPPASSHSHLQINYPWASNNSAGYQNGASN 1
           +   +SSHS  Q+ + W  +  + +  G++N
Sbjct: 366 FPLQSSSHSSAQLGFSWMPSKPSYHSGGSTN 396


>ref|XP_002266017.1| PREDICTED: probable WRKY transcription factor 9-like [Vitis
           vinifera]
          Length = 476

 Score =  123 bits (308), Expect = 2e-26
 Identities = 73/151 (48%), Positives = 91/151 (60%)
 Frame = -1

Query: 453 TVAPGCPVRKQVQRCQEDMSILITTYEGTHNHPLPVGXXXXXXXXXXXANYMLARANSNN 274
           TVAPGCPVRKQVQRC EDMSILITTYEGTHNHPLPVG           A++ML   +S+N
Sbjct: 247 TVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTTSAAASFML--VDSSN 304

Query: 273 HTSADTIDNMQISNFRQNPHMINHSAPHSSSIHSMFNSNDSSKGVVLDLTNNRYNSPQQQ 94
             S       + S    N H IN  +  SSS+    N ND SKG+VLDLTN   + P QQ
Sbjct: 305 PLS-------EASLSYPNSHFINPGS--SSSMIRSINPNDPSKGIVLDLTNTTPSDP-QQ 354

Query: 93  YTPPASSHSHLQINYPWASNNSAGYQNGASN 1
           +   +SSHS  Q+ + W  +  + +  G++N
Sbjct: 355 FPLQSSSHSSAQLGFSWMPSKPSYHSGGSTN 385


>ref|XP_002527935.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223532639|gb|EEF34424.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 532

 Score =  112 bits (280), Expect = 3e-23
 Identities = 73/158 (46%), Positives = 92/158 (58%), Gaps = 7/158 (4%)
 Frame = -1

Query: 453 TVAPGCPVRKQVQRCQEDMSILITTYEGTHNHPLPVGXXXXXXXXXXXANYMLARANSNN 274
           TVAPGCPVRKQVQRC EDMSILITTYEGTHNHPLPVG           A++ML     ++
Sbjct: 297 TVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLL---DSS 353

Query: 273 HTSADTIDNMQISN--FRQNPHMINHSAPHSSSIHSMFNSNDSSKGVVLDLTNNRYNSPQ 100
           +  +D I N    +  +R   H+     PHSS   S+ N ND SKG+VLDLTNN Y++  
Sbjct: 354 NPFSDGISNFTPPSIPYRGASHVF---YPHSSPFRSV-NPNDPSKGIVLDLTNN-YSTHH 408

Query: 99  QQYTPP----ASSHSHLQINYPWASN-NSAGYQNGASN 1
               PP    ASS S  +  + W     S+ +QN  ++
Sbjct: 409 DHQPPPQFPLASSSSSARPAFSWLQGMKSSTHQNNGNS 446


>gb|ACU21043.1| unknown [Glycine max]
          Length = 246

 Score =  105 bits (263), Expect = 3e-21
 Identities = 68/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
 Frame = -1

Query: 453 TVAPGCPVRKQVQRCQEDMSILITTYEGTHNHPLPVGXXXXXXXXXXXANYMLARANSNN 274
           TVAPGCPVRKQVQRC +D+SILIT YEGTHNHPLPVG           A++ML   +S+N
Sbjct: 28  TVAPGCPVRKQVQRCIDDISILITAYEGTHNHPLPVGATAMASTASAAASFML--LDSSN 85

Query: 273 HTSADTIDNMQISNFRQNPHMIN--HSAPHSSSIHSMFNSNDSSKGVVLDLTNNRYNSPQ 100
             S  T      S F Q P   N  HS   +S+  S+ +  D SKG+VLDLT+N  N P 
Sbjct: 86  PISDGT------STFTQAPFPYNTFHSLNPASNFRSI-SPGDPSKGIVLDLTSN-LNEPP 137

Query: 99  QQYTPPASSHSHLQINYPWASNNSAGYQNGAS 4
            +++  +SS++     + W  N    YQ G +
Sbjct: 138 LRFSSGSSSNTATDPRFSWMQNK---YQGGGA 166


>ref|XP_002298189.1| predicted protein [Populus trichocarpa] gi|222845447|gb|EEE82994.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  103 bits (258), Expect = 1e-20
 Identities = 70/160 (43%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
 Frame = -1

Query: 453 TVAPGCPVRKQVQRCQEDMSILITTYEGTHNHPLPVGXXXXXXXXXXXANYMLARANSNN 274
           TV+PGCPV    QRC EDMSILITTYEGTHNHPLPVG           A++ML   NS+N
Sbjct: 289 TVSPGCPV----QRCLEDMSILITTYEGTHNHPLPVGATAMASTASAAASFML--LNSSN 342

Query: 273 HTSADTIDNMQISNFRQNPHMINHSAPHSSSIHSMFNSNDSSKGVVLDLTNNRYNSPQQ- 97
             S   I   Q ++     H  N   P  SS     N ND SKG+VLDLT++R  S  Q 
Sbjct: 343 PLSDGMITTGQANSLPY--HAWN---PQYSSNFRSINPNDPSKGIVLDLTHDRDRSLLQY 397

Query: 96  -------QYTPPASSHSHLQINYP-WASNNSAGYQNGASN 1
                  QY+  ++SH+    ++  W  + S+ YQN A+N
Sbjct: 398 PMMASSSQYSSSSASHNQYPSSFSNWMQSRSSSYQNSAAN 437


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