BLASTX nr result

ID: Coptis23_contig00042842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042842
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535134.1| conserved hypothetical protein [Ricinus comm...   107   1e-21
ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243...   100   9e-20
emb|CBI30815.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_004161150.1| PREDICTED: pre-mRNA-processing factor 39-lik...    87   1e-15
ref|XP_003531286.1| PREDICTED: uncharacterized protein LOC100780...    87   2e-15

>ref|XP_002535134.1| conserved hypothetical protein [Ricinus communis]
           gi|223523950|gb|EEF27249.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 663

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/88 (56%), Positives = 65/88 (73%)
 Frame = -1

Query: 265 QKSHIFSVLSVNFSRFKYMVTGSVDAARDVLIKGIQHLPHCKVLIEGLLNFETMHNGRKQ 86
           +K HI S+L V+FSR KYM T S D ARD+LI GI+H+PHCK+LIE L+ F T H G + 
Sbjct: 72  EKWHILSILYVHFSRLKYMTTDSEDTARDILIDGIKHVPHCKLLIEELIKFATTHGGSRH 131

Query: 85  VDVVDSIVSKAISPGPDASHGLSNEDRE 2
           ++V+D+IV+ AISPG   S GLS +D E
Sbjct: 132 MNVIDTIVANAISPGTSVSQGLSTKDGE 159


>ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243465 [Vitis vinifera]
          Length = 1179

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/88 (55%), Positives = 65/88 (73%)
 Frame = -1

Query: 265 QKSHIFSVLSVNFSRFKYMVTGSVDAARDVLIKGIQHLPHCKVLIEGLLNFETMHNGRKQ 86
           QK HI   L ++FSR +YM+TGSVDAARDVLI GI+ +P  K+L+E L+ F  MH G + 
Sbjct: 460 QKFHILPNLYIHFSRLEYMITGSVDAARDVLIDGIRCVPESKMLLEELIKFAMMHGGPRH 519

Query: 85  VDVVDSIVSKAISPGPDASHGLSNEDRE 2
           ++VVD++V+ AISPG D S GLS +D E
Sbjct: 520 INVVDAVVANAISPGTDVSQGLSAKDGE 547


>emb|CBI30815.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/88 (55%), Positives = 65/88 (73%)
 Frame = -1

Query: 265 QKSHIFSVLSVNFSRFKYMVTGSVDAARDVLIKGIQHLPHCKVLIEGLLNFETMHNGRKQ 86
           QK HI   L ++FSR +YM+TGSVDAARDVLI GI+ +P  K+L+E L+ F  MH G + 
Sbjct: 415 QKFHILPNLYIHFSRLEYMITGSVDAARDVLIDGIRCVPESKMLLEELIKFAMMHGGPRH 474

Query: 85  VDVVDSIVSKAISPGPDASHGLSNEDRE 2
           ++VVD++V+ AISPG D S GLS +D E
Sbjct: 475 INVVDAVVANAISPGTDVSQGLSAKDGE 502


>ref|XP_004161150.1| PREDICTED: pre-mRNA-processing factor 39-like [Cucumis sativus]
          Length = 564

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/88 (50%), Positives = 62/88 (70%)
 Frame = -1

Query: 265 QKSHIFSVLSVNFSRFKYMVTGSVDAARDVLIKGIQHLPHCKVLIEGLLNFETMHNGRKQ 86
           +K  +   L V+FSR K+M+TGSVDAA +VLI GI+++P CK+L+E L+NF  +H   K 
Sbjct: 104 KKLDVLPALYVHFSRLKHMITGSVDAAMEVLIDGIRNVPLCKLLLEELINFVMVHGVPKL 163

Query: 85  VDVVDSIVSKAISPGPDASHGLSNEDRE 2
           +++VD IV+ AIS   D S G S +DRE
Sbjct: 164 INLVDPIVANAISLKADVSQGWSEQDRE 191


>ref|XP_003531286.1| PREDICTED: uncharacterized protein LOC100780705 [Glycine max]
          Length = 212

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/85 (50%), Positives = 56/85 (65%)
 Frame = -1

Query: 256 HIFSVLSVNFSRFKYMVTGSVDAARDVLIKGIQHLPHCKVLIEGLLNFETMHNGRKQVDV 77
           H   +L V+FSR KY+ T SVDAA DVLI G++ LP  K+L+E L+ F  MH G K + V
Sbjct: 104 HALPILYVHFSRLKYLSTNSVDAAGDVLIDGVRTLPQNKLLLEELIKFLMMHGGTKHMAV 163

Query: 76  VDSIVSKAISPGPDASHGLSNEDRE 2
           +DSI++  ISP  + S G S ED E
Sbjct: 164 IDSIIADTISPRSEGSQGFSTEDAE 188


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