BLASTX nr result

ID: Coptis23_contig00042806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042806
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513447.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253...   160   1e-37
emb|CAN80678.1| hypothetical protein VITISV_022712 [Vitis vinifera]   160   1e-37
ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatul...   158   4e-37
ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-37

>ref|XP_002513447.1| conserved hypothetical protein [Ricinus communis]
            gi|223547355|gb|EEF48850.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2278

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/94 (81%), Positives = 87/94 (92%)
 Frame = +3

Query: 3    QNHPGKIFTRTGDLGRILDNKLFITGRIKDLIIVAGRNIYSADVEKTVETSSELLRPGCC 182
            QNHPG+I+TRTGDLGRI+D KLFITGRIKDLIIVAGRNIYSADVEKTVE++SELLRPGCC
Sbjct: 887  QNHPGRIYTRTGDLGRIIDEKLFITGRIKDLIIVAGRNIYSADVEKTVESASELLRPGCC 946

Query: 183  AVIGVPEEILMAKGISVSESPDQVGLVVIAEVRE 284
            AV+G PEE+L +KGI V +  DQVGLVVIAEVR+
Sbjct: 947  AVVGAPEEVLSSKGILVPDGSDQVGLVVIAEVRD 980


>ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253550 [Vitis vinifera]
          Length = 2289

 Score =  160 bits (404), Expect = 1e-37
 Identities = 79/94 (84%), Positives = 87/94 (92%)
 Frame = +3

Query: 3    QNHPGKIFTRTGDLGRILDNKLFITGRIKDLIIVAGRNIYSADVEKTVETSSELLRPGCC 182
            QNHPG+ +TRTGDLGRI+D KLFITGRIKDLIIVAGRNIY+ADVEKTVE+SSELLRPGCC
Sbjct: 902  QNHPGRRYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYAADVEKTVESSSELLRPGCC 961

Query: 183  AVIGVPEEILMAKGISVSESPDQVGLVVIAEVRE 284
            AVIGVPEEIL  KGIS+ +  DQVGLVVIAEVR+
Sbjct: 962  AVIGVPEEILSQKGISLPDHSDQVGLVVIAEVRD 995


>emb|CAN80678.1| hypothetical protein VITISV_022712 [Vitis vinifera]
          Length = 2246

 Score =  160 bits (404), Expect = 1e-37
 Identities = 79/94 (84%), Positives = 87/94 (92%)
 Frame = +3

Query: 3    QNHPGKIFTRTGDLGRILDNKLFITGRIKDLIIVAGRNIYSADVEKTVETSSELLRPGCC 182
            QNHPG+ +TRTGDLGRI+D KLFITGRIKDLIIVAGRNIY+ADVEKTVE+SSELLRPGCC
Sbjct: 926  QNHPGRRYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYAADVEKTVESSSELLRPGCC 985

Query: 183  AVIGVPEEILMAKGISVSESPDQVGLVVIAEVRE 284
            AVIGVPEEIL  KGIS+ +  DQVGLVVIAEVR+
Sbjct: 986  AVIGVPEEILSQKGISLPDHSDQVGLVVIAEVRD 1019


>ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatula]
            gi|355486526|gb|AES67729.1| Bifunctional protein aas
            [Medicago truncatula]
          Length = 2339

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/93 (82%), Positives = 86/93 (92%)
 Frame = +3

Query: 6    NHPGKIFTRTGDLGRILDNKLFITGRIKDLIIVAGRNIYSADVEKTVETSSELLRPGCCA 185
            NHPG+ +TRTGDLGRI+D KLFITGRIKDLIIVAGRNIYS+DVEKTVE+SSELLRPGCCA
Sbjct: 933  NHPGRFYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSELLRPGCCA 992

Query: 186  VIGVPEEILMAKGISVSESPDQVGLVVIAEVRE 284
            VIGVPEE L AKGIS+ +  DQVGLVVIAE+R+
Sbjct: 993  VIGVPEETLSAKGISLPDGSDQVGLVVIAELRD 1025


>ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|222841304|gb|EEE78851.1|
            predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  157 bits (398), Expect = 6e-37
 Identities = 76/94 (80%), Positives = 87/94 (92%)
 Frame = +3

Query: 3    QNHPGKIFTRTGDLGRILDNKLFITGRIKDLIIVAGRNIYSADVEKTVETSSELLRPGCC 182
            QNHPG+ +TRTGDLGRI+D K+FITGRIKDLIIVAGRNIYS DVEKTVE++SELLRPGCC
Sbjct: 921  QNHPGRKYTRTGDLGRIIDGKVFITGRIKDLIIVAGRNIYSTDVEKTVESASELLRPGCC 980

Query: 183  AVIGVPEEILMAKGISVSESPDQVGLVVIAEVRE 284
            AVIGVPEE+L +KGIS+ +  DQVGLVVIAEVR+
Sbjct: 981  AVIGVPEEVLSSKGISLPDCSDQVGLVVIAEVRD 1014


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