BLASTX nr result

ID: Coptis23_contig00042796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042796
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...   143   1e-32
emb|CBI15934.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
emb|CBI15935.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [M...   131   5e-29

>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/87 (78%), Positives = 75/87 (86%)
 Frame = -3

Query: 287  EVPLVGTRFQYRQKGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSS 108
            EVPL+GTRFQYR+ GMC ILM+ LEKKL ELGVE+LVLPAVP  L+ WTTSFGFSKMT S
Sbjct: 1138 EVPLIGTRFQYRRLGMCHILMNELEKKLMELGVERLVLPAVPSVLNTWTTSFGFSKMTDS 1197

Query: 107  ERLMFLDYTFLDFQDTTMCQKILRKAP 27
            ERL FLDY+FLDFQDT MCQK+L K P
Sbjct: 1198 ERLRFLDYSFLDFQDTVMCQKLLMKIP 1224


>emb|CBI15934.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/87 (78%), Positives = 75/87 (86%)
 Frame = -3

Query: 287  EVPLVGTRFQYRQKGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSS 108
            EVPL+GTRFQYR+ GMC ILM+ LEKKL ELGVE+LVLPAVP  L+ WTTSFGFSKMT S
Sbjct: 886  EVPLIGTRFQYRRLGMCHILMNELEKKLMELGVERLVLPAVPSVLNTWTTSFGFSKMTDS 945

Query: 107  ERLMFLDYTFLDFQDTTMCQKILRKAP 27
            ERL FLDY+FLDFQDT MCQK+L K P
Sbjct: 946  ERLRFLDYSFLDFQDTVMCQKLLMKIP 972


>ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|222850398|gb|EEE87945.1|
            predicted protein [Populus trichocarpa]
          Length = 978

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/85 (80%), Positives = 75/85 (88%)
 Frame = -3

Query: 287  EVPLVGTRFQYRQKGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSS 108
            E+PLVGTRFQ+RQ GMCRILMDVLEKKL ELGV++LVLPAVP  L+ WT SFGFSKMT S
Sbjct: 894  EIPLVGTRFQFRQLGMCRILMDVLEKKLMELGVQRLVLPAVPGVLNTWTGSFGFSKMTDS 953

Query: 107  ERLMFLDYTFLDFQDTTMCQKILRK 33
            ERL F+DYTFLDFQDT MCQK+L K
Sbjct: 954  ERLQFVDYTFLDFQDTVMCQKLLMK 978


>emb|CBI15935.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/89 (73%), Positives = 72/89 (80%)
 Frame = -3

Query: 287 EVPLVGTRFQYRQKGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSS 108
           EVPLVGTR QYR+ GMCRIL++ +EKKL ELGVE+L LPA P  L  W TSFGFSKMT S
Sbjct: 571 EVPLVGTRSQYRRLGMCRILINEIEKKLVELGVERLTLPAAPSVLDTWVTSFGFSKMTDS 630

Query: 107 ERLMFLDYTFLDFQDTTMCQKILRKAPES 21
           ERL FLDYTFLDFQDT MCQK+L K P +
Sbjct: 631 ERLTFLDYTFLDFQDTVMCQKLLMKIPST 659


>ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [Medicago truncatula]
            gi|355517044|gb|AES98667.1| Chromodomain
            helicase-DNA-binding protein [Medicago truncatula]
          Length = 1144

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/87 (71%), Positives = 71/87 (81%)
 Frame = -3

Query: 287  EVPLVGTRFQYRQKGMCRILMDVLEKKLAELGVEKLVLPAVPQTLHAWTTSFGFSKMTSS 108
            EVPLVGTRFQYR+ GMCR+LMD LEKKL +LGVE+LVLPAVP  L  WT SFGF +MT+ 
Sbjct: 1002 EVPLVGTRFQYRRLGMCRVLMDELEKKLKQLGVERLVLPAVPGVLDTWTNSFGFEQMTNF 1061

Query: 107  ERLMFLDYTFLDFQDTTMCQKILRKAP 27
            ER  FLDY+FLDFQ T MCQK+L + P
Sbjct: 1062 ERSQFLDYSFLDFQGTVMCQKLLTRFP 1088


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