BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042793
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001756343.1| predicted protein [Physcomitrella patens sub...    69   4e-10
ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltrans...    67   2e-09
emb|CBI37670.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltrans...    67   2e-09
ref|XP_004163010.1| PREDICTED: adoMet-dependent rRNA methyltrans...    64   1e-08

>ref|XP_001756343.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162692382|gb|EDQ78739.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 844

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/56 (58%), Positives = 42/56 (75%)
 Frame = -3

Query: 262 PSCLLIKEHSLTTEEIKILCDDLEVLGEKDRKCLLKWRNEVRKALYLTQSTVKVDD 95
           P C +IKEH LTT+EIKILC+DL VLG+ + K LLKWR ++RK L  T ++ K DD
Sbjct: 282 PDCKVIKEHDLTTDEIKILCEDLRVLGKTEFKQLLKWRLQIRKNLEPTPASDKEDD 337


>ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
           [Glycine max]
          Length = 834

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/86 (46%), Positives = 48/86 (55%)
 Frame = -3

Query: 262 PSCLLIKEHSLTTEEIKILCDDLEVLGEKDRKCLLKWRNEVRKALYLTQSTVKVDDVPXX 83
           P+  LIK+H LT+EE+K LCDDL VLG++D K LLKWR +VRKAL  TQ        P  
Sbjct: 281 PADSLIKDHDLTSEEVKSLCDDLRVLGKQDFKHLLKWRIQVRKALSPTQK-------PDS 333

Query: 82  XXXXXXXXXXXXXXXXXEILNEMEEI 5
                             ILNEMEE+
Sbjct: 334 TTTELMDNEPKVVDEEDRILNEMEEL 359


>emb|CBI37670.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
 Frame = -3

Query: 262 PSCLLIKEHSLTTEEIKILCDDLEVLGEKDRKCLLKWRNEVRKALYLTQ---STVKVDD 95
           P+ L IK+H+LTTEE+K LCDDL VLG++D K LLKWR  VRKAL   Q   ST   DD
Sbjct: 280 PASLPIKDHALTTEEVKTLCDDLRVLGKQDFKHLLKWRMHVRKALSPVQKATSTAAEDD 338


>ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1 [Vitis
           vinifera]
          Length = 842

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
 Frame = -3

Query: 262 PSCLLIKEHSLTTEEIKILCDDLEVLGEKDRKCLLKWRNEVRKALYLTQ---STVKVDD 95
           P+ L IK+H+LTTEE+K LCDDL VLG++D K LLKWR  VRKAL   Q   ST   DD
Sbjct: 280 PASLPIKDHALTTEEVKTLCDDLRVLGKQDFKHLLKWRMHVRKALSPVQKATSTAAEDD 338


>ref|XP_004163010.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like,
           partial [Cucumis sativus]
          Length = 615

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = -3

Query: 262 PSCLLIKEHSLTTEEIKILCDDLEVLGEKDRKCLLKWRNEVRKAL 128
           P  L IK+H LTTEE+K LCDDL VLG++D K LLKWR  +RKAL
Sbjct: 42  PDSLPIKDHDLTTEEVKALCDDLRVLGKQDFKHLLKWRLHIRKAL 86