BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042785
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22243.3| unnamed protein product [Vitis vinifera]              188   3e-46
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   188   3e-46
ref|XP_002873718.1| pentatricopeptide repeat-containing protein ...   183   1e-44
ref|NP_197034.2| pentatricopeptide repeat-containing protein [Ar...   181   7e-44
emb|CAB89340.1| putative protein [Arabidopsis thaliana]               181   7e-44

>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/115 (77%), Positives = 101/115 (87%)
 Frame = -3

Query: 347 VIEGCQYFDLMRIQYGIEPNIKHYGCMVDLLGRAGLLDEAFKFVEEMEIEPNPIIWRTLL 168
           V EG QYFDLMR +Y IEPNI+HYGCMVDLLGRAGLL+EAF F++ M+IEPN I+WRTLL
Sbjct: 359 VEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLL 418

Query: 167 GACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERVRNLMDD 3
           GACRI GNV LG+RAN +LL MR + SGDYVLLSNIYAS+GEWDGVE+VR LMDD
Sbjct: 419 GACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDD 473


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/115 (77%), Positives = 101/115 (87%)
 Frame = -3

Query: 347 VIEGCQYFDLMRIQYGIEPNIKHYGCMVDLLGRAGLLDEAFKFVEEMEIEPNPIIWRTLL 168
           V EG QYFDLMR +Y IEPNI+HYGCMVDLLGRAGLL+EAF F++ M+IEPN I+WRTLL
Sbjct: 394 VEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLL 453

Query: 167 GACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERVRNLMDD 3
           GACRI GNV LG+RAN +LL MR + SGDYVLLSNIYAS+GEWDGVE+VR LMDD
Sbjct: 454 GACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDD 508


>ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319555|gb|EFH49977.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 548

 Score =  183 bits (464), Expect = 1e-44
 Identities = 86/115 (74%), Positives = 99/115 (86%)
 Frame = -3

Query: 347 VIEGCQYFDLMRIQYGIEPNIKHYGCMVDLLGRAGLLDEAFKFVEEMEIEPNPIIWRTLL 168
           V EG +YF LMR  Y IEPNIKHYGCMVD+LGRAGLL+EAF FVE M+IEPN I+WRTLL
Sbjct: 396 VDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIVWRTLL 455

Query: 167 GACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERVRNLMDD 3
           GAC+I GNV LGK ANEKLL+MR++ SGDYVLLSNIYAS G+WDGV++VR + DD
Sbjct: 456 GACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510


>ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15300 gi|332004762|gb|AED92145.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/115 (73%), Positives = 98/115 (85%)
 Frame = -3

Query: 347 VIEGCQYFDLMRIQYGIEPNIKHYGCMVDLLGRAGLLDEAFKFVEEMEIEPNPIIWRTLL 168
           V EG +YF LMR  Y IEPNIKHYGCMVD+LGRAG L+EAF FVE M+IEPN I+WRTLL
Sbjct: 396 VDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455

Query: 167 GACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERVRNLMDD 3
           GAC+I GNV LGK ANEKLL+MR++ SGDYVLLSNIYAS G+WDGV++VR + DD
Sbjct: 456 GACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510


>emb|CAB89340.1| putative protein [Arabidopsis thaliana]
          Length = 514

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/115 (73%), Positives = 98/115 (85%)
 Frame = -3

Query: 347 VIEGCQYFDLMRIQYGIEPNIKHYGCMVDLLGRAGLLDEAFKFVEEMEIEPNPIIWRTLL 168
           V EG +YF LMR  Y IEPNIKHYGCMVD+LGRAG L+EAF FVE M+IEPN I+WRTLL
Sbjct: 362 VDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 421

Query: 167 GACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERVRNLMDD 3
           GAC+I GNV LGK ANEKLL+MR++ SGDYVLLSNIYAS G+WDGV++VR + DD
Sbjct: 422 GACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 476